RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YIL108WP40483 696 aaKnown RBP6.34□□□□□ -1.4
RTG3YBL103C CEP3P40969 608 aa6.34□□□□□ -1.4
RTG3YBL103C YGR125WP53273 1036 aa6.34□□□□□ -1.4
RTG3YBL103C HRR25P29295 494 aaKnown RBP6.33□□□□□ -1.4
RTG3YBL103C SLI1P53304 468 aa6.33□□□□□ -1.4
RTG3YBL103C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
RTG3YBL103C ENB1Q08299 606 aa6.33□□□□□ -1.4
RTG3YBL103C CIT1P00890 479 aa6.32□□□□□ -1.4
RTG3YBL103C AIM39Q08223 395 aa6.32□□□□□ -1.4
RTG3YBL103C GUP2Q08929 609 aa6.32□□□□□ -1.4
RTG3YBL103C FBP1P09201 348 aa6.31□□□□□ -1.4
RTG3YBL103C TYE7P33122 291 aaPredicted RBP6.31□□□□□ -1.4
RTG3YBL103C HDA1P53973 706 aa6.31□□□□□ -1.4
RTG3YBL103C URA1P28272 314 aaPredicted RBP6.3□□□□□ -1.4
RTG3YBL103C YHR020WP38708 688 aaKnown RBP6.3□□□□□ -1.4
RTG3YBL103C HUL5P53119 910 aa6.3□□□□□ -1.4
RTG3YBL103C YKR011CQ02209 353 aa6.3□□□□□ -1.4
RTG3YBL103C SLU7Q02775 382 aaKnown RBP6.3□□□□□ -1.4
RTG3YBL103C FLC1Q08967 793 aa6.3□□□□□ -1.4
RTG3YBL103C YJL049WP47048 450 aa6.29□□□□□ -1.4
RTG3YBL103C ENV7Q12003 364 aa6.29□□□□□ -1.4
RTG3YBL103C SDP1P40479 209 aa6.28□□□□□ -1.4
RTG3YBL103C HUL4P40985 892 aa6.28□□□□□ -1.4
RTG3YBL103C BUL1P48524 976 aa6.28□□□□□ -1.4
RTG3YBL103C TAF8Q03750 510 aa6.28□□□□□ -1.4
RTG3YBL103C URN1Q06525 465 aaKnown RBP6.28□□□□□ -1.4
RTG3YBL103C YDL124WQ07551 312 aaKnown RBP6.28□□□□□ -1.4
RTG3YBL103C RPS9AO13516 197 aaKnown RBP6.28□□□□□ -1.4
RTG3YBL103C MPH2P0CD99 609 aa6.28□□□□□ -1.4
RTG3YBL103C UBP6P43593 499 aaKnown RBP6.28□□□□□ -1.4
RTG3YBL103C SEC21P32074 935 aaKnown RBP6.27□□□□□ -1.41
RTG3YBL103C SCT1P32784 759 aa6.27□□□□□ -1.41
RTG3YBL103C CHS7P38843 316 aa6.27□□□□□ -1.41
RTG3YBL103C EFT1P32324 842 aaKnown RBP6.26□□□□□ -1.41
RTG3YBL103C BET3P36149 193 aa6.26□□□□□ -1.41
RTG3YBL103C CTF8P38877 133 aa6.26□□□□□ -1.41
RTG3YBL103C CTF4Q01454 927 aa6.26□□□□□ -1.41
RTG3YBL103C PEX19Q07418 342 aa6.26□□□□□ -1.41
RTG3YBL103C TOM70P07213 617 aaKnown RBP6.25□□□□□ -1.41
RTG3YBL103C RSP5P39940 809 aaKnown RBP6.25□□□□□ -1.41
RTG3YBL103C BDF2Q07442 638 aa6.25□□□□□ -1.41
RTG3YBL103C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
RTG3YBL103C NIT3P49954 291 aa6.24□□□□□ -1.41
RTG3YBL103C PUS2P53167 370 aa6.24□□□□□ -1.41
RTG3YBL103C YLR040CQ07988 224 aa6.24□□□□□ -1.41
RTG3YBL103C CAN1P04817 590 aa6.23□□□□□ -1.41
RTG3YBL103C TRP4P07285 380 aaPredicted RBP6.23□□□□□ -1.41
RTG3YBL103C CYS3P31373 394 aaKnown RBP6.23□□□□□ -1.41
RTG3YBL103C GYP8P43570 497 aa6.23□□□□□ -1.41
RTG3YBL103C RTA1P53047 317 aa6.23□□□□□ -1.41
RTG3YBL103C CDC53Q12018 815 aaKnown RBP6.23□□□□□ -1.41
RTG3YBL103C TUB3P09734 445 aaKnown RBP6.22□□□□□ -1.41
RTG3YBL103C DAL7P21826 554 aa6.22□□□□□ -1.41
RTG3YBL103C SUL1P38359 859 aa6.22□□□□□ -1.41
RTG3YBL103C NOG2P53742 486 aaKnown RBP6.22□□□□□ -1.41
RTG3YBL103C HAL9Q12180 1030 aa6.22□□□□□ -1.41
RTG3YBL103C SWM1Q12379 170 aa6.22□□□□□ -1.41
RTG3YBL103C ERG4P25340 473 aa6.22□□□□□ -1.41
RTG3YBL103C EMC3P36039 253 aa6.22□□□□□ -1.41
RTG3YBL103C YHR078WP38799 552 aa6.22□□□□□ -1.41
RTG3YBL103C ERG5P54781 538 aa6.22□□□□□ -1.41
RTG3YBL103C NSE3Q05541 303 aa6.22□□□□□ -1.41
RTG3YBL103C TRM13Q12383 476 aa6.22□□□□□ -1.41
RTG3YBL103C YCL002CP25565 263 aa6.21□□□□□ -1.42
RTG3YBL103C NNF1P47149 201 aa6.21□□□□□ -1.42
RTG3YBL103C TAD1P53065 400 aa6.21□□□□□ -1.42
RTG3YBL103C YGR283CP53336 341 aaPredicted RBP6.21□□□□□ -1.42
RTG3YBL103C DUS1P53759 423 aaKnown RBP6.21□□□□□ -1.42
RTG3YBL103C LRS4Q04087 347 aaKnown RBP6.21□□□□□ -1.42
RTG3YBL103C YOL073CQ08232 322 aa6.21□□□□□ -1.42
RTG3YBL103C YOR022CQ12204 715 aa6.21□□□□□ -1.42
RTG3YBL103C CTF13P35203 478 aa6.19□□□□□ -1.42
RTG3YBL103C KTR4P38131 464 aa6.19□□□□□ -1.42
RTG3YBL103C GGA2P38817 585 aaKnown RBP6.19□□□□□ -1.42
RTG3YBL103C VHR1P40522 640 aa6.19□□□□□ -1.42
RTG3YBL103C ALG2P43636 503 aa6.19□□□□□ -1.42
RTG3YBL103C PHR1P05066 565 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
RTG3YBL103C STI1P15705 589 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
RTG3YBL103C GAL11P19659 1081 aa6.18□□□□□ -1.42
RTG3YBL103C PRP4P20053 465 aaKnown RBP6.18□□□□□ -1.42
RTG3YBL103C DAM1P53267 343 aa6.18□□□□□ -1.42
RTG3YBL103C PRC1P00729 532 aa6.17□□□□□ -1.42
RTG3YBL103C SAP190P36123 1033 aa6.17□□□□□ -1.42
RTG3YBL103C TRM11Q12463 433 aa6.17□□□□□ -1.42
RTG3YBL103C MRPS35P53292 345 aa6.16□□□□□ -1.42
RTG3YBL103C YOL098CQ12496 1037 aa6.16□□□□□ -1.42
RTG3YBL103C RPP1P38786 293 aa6.15□□□□□ -1.42
RTG3YBL103C RNT1Q02555 471 aa6.15□□□□□ -1.42
RTG3YBL103C YMR206WQ03695 313 aa6.15□□□□□ -1.42
RTG3YBL103C YDR514CQ04408 483 aa6.15□□□□□ -1.42
RTG3YBL103C RAD53P22216 821 aa6.15□□□□□ -1.43
RTG3YBL103C MOH1P38191 138 aa6.15□□□□□ -1.43
RTG3YBL103C SAK1P38990 1142 aa6.15□□□□□ -1.43
RTG3YBL103C SSY5P47002 699 aa6.15□□□□□ -1.43
RTG3YBL103C ASI2P53895 289 aa6.15□□□□□ -1.43
RTG3YBL103C MUS81Q04149 632 aaPredicted RBP6.15□□□□□ -1.43
RTG3YBL103C MET7Q08645 548 aa6.15□□□□□ -1.43
RTG3YBL103C ALG7P07286 448 aa6.14□□□□□ -1.43
RTG3YBL103C SRP40P32583 406 aaPredicted RBP6.14□□□□□ -1.43
RTG3YBL103C OAR1P35731 278 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms