RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C GIS4Q04233 774 aa5.86□□□□□ -1.47
RFA1YAR007C TMA64Q04600 565 aaKnown RBP5.86□□□□□ -1.47
RFA1YAR007C YSH1Q06224 779 aaPredicted RBP5.86□□□□□ -1.47
RFA1YAR007C FRA1Q07825 749 aa5.86□□□□□ -1.47
RFA1YAR007C MLH2Q07980 695 aa5.86□□□□□ -1.47
RFA1YAR007C MAM3Q12296 706 aa5.86□□□□□ -1.47
RFA1YAR007C YRF1-3P0CX14 1859 aa5.86□□□□□ -1.47
RFA1YAR007C YRF1-7P0CX15 1859 aa5.86□□□□□ -1.47
RFA1YAR007C YRF1-6P53819 1859 aa5.86□□□□□ -1.47
RFA1YAR007C MET6P05694 767 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C POL3P15436 1097 aa5.85□□□□□ -1.47
RFA1YAR007C OM45P16547 393 aa5.85□□□□□ -1.47
RFA1YAR007C TYR1P20049 452 aa5.85□□□□□ -1.47
RFA1YAR007C PWP1P21304 576 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C RPC82P32349 654 aa5.85□□□□□ -1.47
RFA1YAR007C KAR9P32526 644 aa5.85□□□□□ -1.47
RFA1YAR007C SSE1P32589 693 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C JNM1P36224 373 aa5.85□□□□□ -1.47
RFA1YAR007C MAL31P38156 614 aa5.85□□□□□ -1.47
RFA1YAR007C CSM2P40465 213 aa5.85□□□□□ -1.47
RFA1YAR007C RRN7P40992 514 aa5.85□□□□□ -1.47
RFA1YAR007C KAP114P53067 1004 aa5.85□□□□□ -1.47
RFA1YAR007C CPR6P53691 371 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C RTC4P53850 401 aa5.85□□□□□ -1.47
RFA1YAR007C NAF1P53919 492 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C RPS15Q01855 142 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C IMH1Q06704 911 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C GPN2Q08726 347 aaPredicted RBP5.85□□□□□ -1.47
RFA1YAR007C RTP1Q12751 981 aa5.85□□□□□ -1.47
RFA1YAR007C TAL1P15019 335 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C MLS1P30952 554 aa5.85□□□□□ -1.47
RFA1YAR007C SCS2P40075 244 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C MMM1P41800 426 aa5.85□□□□□ -1.47
RFA1YAR007C SEC27P41811 889 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C SPR3P41901 512 aa5.85□□□□□ -1.47
RFA1YAR007C GCN20P43535 752 aaKnown RBP5.85□□□□□ -1.47
RFA1YAR007C CLA4P48562 842 aa5.85□□□□□ -1.47
RFA1YAR007C YNL040WP53960 456 aaPredicted RBP5.85□□□□□ -1.47
RFA1YAR007C YPR097WQ06839 1073 aa5.85□□□□□ -1.47
RFA1YAR007C CIR2Q08822 631 aa5.85□□□□□ -1.47
RFA1YAR007C TIP41Q12199 356 aa5.85□□□□□ -1.47
RFA1YAR007C CEX1Q12453 761 aa5.85□□□□□ -1.47
RFA1YAR007C SEY1Q99287 776 aa5.85□□□□□ -1.47
RFA1YAR007C POM152P39685 1337 aa5.84□□□□□ -1.47
RFA1YAR007C ENO2P00925 437 aaKnown RBP5.84□□□□□ -1.47
RFA1YAR007C TUF1P02992 437 aaKnown RBP5.84□□□□□ -1.47
RFA1YAR007C UBP1P25037 809 aa5.84□□□□□ -1.47
RFA1YAR007C ANP1P32629 500 aa5.84□□□□□ -1.47
RFA1YAR007C AIR1P40507 360 aaKnown RBP5.84□□□□□ -1.47
RFA1YAR007C BRO1P48582 844 aa5.84□□□□□ -1.47
RFA1YAR007C UBA2P52488 636 aa5.84□□□□□ -1.47
RFA1YAR007C TOF1P53840 1238 aa5.84□□□□□ -1.47
RFA1YAR007C FRK1Q03002 865 aaPredicted RBP5.84□□□□□ -1.47
RFA1YAR007C SHE9Q04172 456 aa5.84□□□□□ -1.47
RFA1YAR007C ATG13Q06628 738 aa5.84□□□□□ -1.47
RFA1YAR007C MET7Q08645 548 aa5.84□□□□□ -1.47
RFA1YAR007C CLF1Q12309 687 aaPredicted RBP5.84□□□□□ -1.47
RFA1YAR007C ADH4P10127 382 aa5.83□□□□□ -1.48
RFA1YAR007C RNR3P21672 869 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C RPC53P25441 422 aa5.83□□□□□ -1.48
RFA1YAR007C SIN4P32259 974 aa5.83□□□□□ -1.48
RFA1YAR007C BUD2P33314 1104 aa5.83□□□□□ -1.48
RFA1YAR007C GLO3P38682 493 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C PPX1P38698 397 aa5.83□□□□□ -1.48
RFA1YAR007C NUP60P39705 539 aa5.83□□□□□ -1.48
RFA1YAR007C SGM1P47166 707 aa5.83□□□□□ -1.48
RFA1YAR007C MCM6P53091 1017 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C HFD1Q04458 532 aa5.83□□□□□ -1.48
RFA1YAR007C UTP14Q04500 899 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C VIP1Q06685 1146 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C LAM6Q08001 693 aa5.83□□□□□ -1.48
RFA1YAR007C SSB1P11484 613 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C CLN3P13365 580 aa5.83□□□□□ -1.48
RFA1YAR007C CDC48P25694 835 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C PYC2P32327 1180 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C EFB1P32471 206 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C CBF2P32504 956 aa5.83□□□□□ -1.48
RFA1YAR007C YME1P32795 747 aa5.83□□□□□ -1.48
RFA1YAR007C SMC1P32908 1225 aa5.83□□□□□ -1.48
RFA1YAR007C VPS35P34110 944 aa5.83□□□□□ -1.48
RFA1YAR007C ERP5P38819 212 aa5.83□□□□□ -1.48
RFA1YAR007C SPL2P38839 148 aa5.83□□□□□ -1.48
RFA1YAR007C SSB2P40150 613 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C IES2P40154 320 aa5.83□□□□□ -1.48
RFA1YAR007C YGR153WP48238 217 aa5.83□□□□□ -1.48
RFA1YAR007C YGL138CP53122 345 aa5.83□□□□□ -1.48
RFA1YAR007C RIM8P53179 542 aa5.83□□□□□ -1.48
RFA1YAR007C KRE28Q04431 385 aa5.83□□□□□ -1.48
RFA1YAR007C YDR341CQ05506 607 aaKnown RBP5.83□□□□□ -1.48
RFA1YAR007C AIM41Q12032 185 aa5.83□□□□□ -1.48
RFA1YAR007C SPO21Q12411 609 aa5.83□□□□□ -1.48
RFA1YAR007C RIM15P43565 1770 aa5.83□□□□□ -1.48
RFA1YAR007C RPL24AP04449 155 aaKnown RBP5.82□□□□□ -1.48
RFA1YAR007C NAT1P12945 854 aaKnown RBP5.82□□□□□ -1.48
RFA1YAR007C STI1P15705 589 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
RFA1YAR007C VMA4P22203 233 aaKnown RBP5.82□□□□□ -1.48
RFA1YAR007C MAK31P23059 88 aa5.82□□□□□ -1.48
RFA1YAR007C SMY1P32364 656 aaKnown RBP5.82□□□□□ -1.48
RFA1YAR007C NPL6P32832 435 aa5.82□□□□□ -1.48
RFA1YAR007C NIP100P33420 868 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms