RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
NCBP3-203ENST00000574379 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
NCBP3-203ENST00000574379 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
NCBP3-203ENST00000574379 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
NCBP3-203ENST00000574379 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
NCBP3-203ENST00000574379 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
NCBP3-203ENST00000574379 CTU1Q7Z7A3 348 aaKnown RBP13.15□□□□□ -0.3
NCBP3-203ENST00000574379 GPC2Q8N158 579 aa13.15□□□□□ -0.3
NCBP3-203ENST00000574379 BRIP1Q9BX63 1249 aa13.15□□□□□ -0.3
NCBP3-203ENST00000574379 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
NCBP3-203ENST00000574379 COL15A1P39059 1388 aa13.15□□□□□ -0.3
NCBP3-203ENST00000574379 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
NCBP3-203ENST00000574379 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
NCBP3-203ENST00000574379 COL11A2P13942 1736 aaPredicted RBP13.14□□□□□ -0.31
NCBP3-203ENST00000574379 TRPA1O75762 1119 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
NCBP3-203ENST00000574379 TEFQ10587 303 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 NOGQ13253 232 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 MCM10Q7L590 875 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
NCBP3-203ENST00000574379 ZIC5Q96T25 663 aa13.14□□□□□ -0.31
NCBP3-203ENST00000574379 SLX4Q8IY92 1834 aa13.13□□□□□ -0.31
NCBP3-203ENST00000574379 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
NCBP3-203ENST00000574379 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
NCBP3-203ENST00000574379 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
NCBP3-203ENST00000574379 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
NCBP3-203ENST00000574379 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
NCBP3-203ENST00000574379 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
NCBP3-203ENST00000574379 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
NCBP3-203ENST00000574379 EPS15P42566 896 aa13.12□□□□□ -0.31
NCBP3-203ENST00000574379 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
NCBP3-203ENST00000574379 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
NCBP3-203ENST00000574379 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
NCBP3-203ENST00000574379 MASTLQ96GX5 879 aa13.12□□□□□ -0.31
NCBP3-203ENST00000574379 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
NCBP3-203ENST00000574379 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
NCBP3-203ENST00000574379 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
NCBP3-203ENST00000574379 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
NCBP3-203ENST00000574379 ST5P78524 1137 aa13.11□□□□□ -0.31
NCBP3-203ENST00000574379 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
NCBP3-203ENST00000574379 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
NCBP3-203ENST00000574379 HDAC9Q9UKV0 1011 aa13.11□□□□□ -0.31
NCBP3-203ENST00000574379 ZBTB1Q9Y2K1 713 aa13.11□□□□□ -0.31
NCBP3-203ENST00000574379 FZD9O00144 591 aa13.1□□□□□ -0.31
NCBP3-203ENST00000574379 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
NCBP3-203ENST00000574379 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
NCBP3-203ENST00000574379 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
NCBP3-203ENST00000574379 HHIPL1Q96JK4 782 aa13.1□□□□□ -0.31
NCBP3-203ENST00000574379 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
NCBP3-203ENST00000574379 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
NCBP3-203ENST00000574379 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 KCNQ3O43525 872 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 SRGNP10124 158 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 HUNKP57058 714 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 RIPK4P57078 832 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 TTC5Q8N0Z6 440 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
NCBP3-203ENST00000574379 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
NCBP3-203ENST00000574379 RNF186Q9NXI6 227 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
NCBP3-203ENST00000574379 HEG1Q9ULI3 1381 aa13.08□□□□□ -0.31
NCBP3-203ENST00000574379 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
NCBP3-203ENST00000574379 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
NCBP3-203ENST00000574379 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
NCBP3-203ENST00000574379 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
NCBP3-203ENST00000574379 SCNN1DP51172 638 aa13.07□□□□□ -0.32
NCBP3-203ENST00000574379 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
NCBP3-203ENST00000574379 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
NCBP3-203ENST00000574379 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
NCBP3-203ENST00000574379 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
NCBP3-203ENST00000574379 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
NCBP3-203ENST00000574379 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
NCBP3-203ENST00000574379 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
NCBP3-203ENST00000574379 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 APAF1O14727 1248 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 PKN2Q16513 984 aaKnown RBP13.05□□□□□ -0.32
NCBP3-203ENST00000574379 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
NCBP3-203ENST00000574379 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 ADARB2Q9NS39 739 aaKnown RBP13.05□□□□□ -0.32
NCBP3-203ENST00000574379 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
NCBP3-203ENST00000574379 A0A087WZG4 1122 aa13.04□□□□□ -0.32
NCBP3-203ENST00000574379 ZNF157P51786 506 aaPredicted RBP13.04□□□□□ -0.32
NCBP3-203ENST00000574379 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
NCBP3-203ENST00000574379 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
NCBP3-203ENST00000574379 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
NCBP3-203ENST00000574379 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
NCBP3-203ENST00000574379 NPR1P16066 1061 aa13.03□□□□□ -0.32
NCBP3-203ENST00000574379 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
NCBP3-203ENST00000574379 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
NCBP3-203ENST00000574379 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
NCBP3-203ENST00000574379 CCDC102AQ96A19 550 aa13.02□□□□□ -0.33
NCBP3-203ENST00000574379 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
NCBP3-203ENST00000574379 NUP98P52948 1817 aa13.02□□□□□ -0.33
NCBP3-203ENST00000574379 PRAMEF22A3QJZ6 481 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms