RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	ANKRD30A	Q9BXX3	1397 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	POLR1A	O95602	1720 aa	Predicted RBP	10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	CARNS1	A5YM72	827 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	MEN1	O00255	615 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	LCE2B	O14633	110 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	UPP2	O95045	317 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	INHA	P05111	366 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	BMP2	P12643	396 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	PIP4K2B	P78356	416 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	RETREG2	Q8NC44	543 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	INSM2	Q96T92	566 aa	Predicted RBP	10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	ERBIN	Q96RT1	1412 aa		10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	ZC3H13	Q5T200	1668 aa	Known RBP	10.82	□□□□□ -0.68
MARK3-223	ENST00000561071	LTK	P29376	864 aa		10.81	□□□□□ -0.68
MARK3-223	ENST00000561071	CLN3	Q13286	438 aa		10.81	□□□□□ -0.68
MARK3-223	ENST00000561071	TMEM164	Q5U3C3	297 aa		10.81	□□□□□ -0.68
MARK3-223	ENST00000561071	ILDR2	Q71H61	639 aa		10.81	□□□□□ -0.68
MARK3-223	ENST00000561071	FAM200A	Q8TCP9	573 aa		10.81	□□□□□ -0.68
MARK3-223	ENST00000561071	CNKSR1	Q969H4	720 aa		10.81	□□□□□ -0.68
MARK3-223	ENST00000561071	PRDM15	P57071	1507 aa	Predicted RBP	10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	SPINT1	O43278	529 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	LGR5	O75473	907 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	SEC13	P55735	322 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	ESCO1	Q5FWF5	840 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	TXNDC2	Q86VQ3	553 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	XAGE2	Q96GT9	111 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	ESYT1	Q9BSJ8	1104 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	ATP13A2	Q9NQ11	1180 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	RBM19	Q9Y4C8	960 aa	Known RBP	10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	VWDE	Q8N2E2	1590 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	MED14	O60244	1454 aa		10.8	□□□□□ -0.68
MARK3-223	ENST00000561071	KANK1	Q14678	1352 aa		10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	ARHGAP31	Q2M1Z3	1444 aa		10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	WASL	O00401	505 aa	Predicted RBP	10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	CTSO	P43234	321 aa	Predicted RBP	10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	IDI1	Q13907	227 aa		10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	TSEN2	Q8NCE0	465 aa	Known RBP	10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	ZFP42	Q96MM3	310 aa		10.79	□□□□□ -0.68
MARK3-223	ENST00000561071	CSB-PGBD3	P0DP91	1061 aa		10.78	□□□□□ -0.68
MARK3-223	ENST00000561071	SCARF1	Q14162	830 aa		10.78	□□□□□ -0.68
MARK3-223	ENST00000561071	POLM	Q9NP87	494 aa	Predicted RBP	10.78	□□□□□ -0.68
MARK3-223	ENST00000561071	HRH3	Q9Y5N1	445 aa		10.78	□□□□□ -0.68
MARK3-223	ENST00000561071	DEPDC5	O75140	1603 aa		10.77	□□□□□ -0.68
MARK3-223	ENST00000561071	HSPA1L	P34931	641 aa		10.77	□□□□□ -0.69
MARK3-223	ENST00000561071	ITGAE	P38570	1179 aa		10.77	□□□□□ -0.69
MARK3-223	ENST00000561071	TNS4	Q8IZW8	715 aa		10.77	□□□□□ -0.69
MARK3-223	ENST00000561071	NLRP3	Q96P20	1036 aa		10.77	□□□□□ -0.69
MARK3-223	ENST00000561071	UBR1	Q8IWV7	1749 aa		10.77	□□□□□ -0.69
MARK3-223	ENST00000561071	CPS1	P31327	1500 aa		10.77	□□□□□ -0.69
MARK3-223	ENST00000561071	IQGAP1	P46940	1657 aa		10.76	□□□□□ -0.69
MARK3-223	ENST00000561071	TMEM88B	A6NKF7	163 aa		10.76	□□□□□ -0.69
MARK3-223	ENST00000561071	TOM1	O60784	492 aa		10.76	□□□□□ -0.69
MARK3-223	ENST00000561071	CENPC	Q03188	943 aa		10.76	□□□□□ -0.69
MARK3-223	ENST00000561071	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.76	□□□□□ -0.69
MARK3-223	ENST00000561071	SLC4A9	Q96Q91	983 aa		10.76	□□□□□ -0.69
MARK3-223	ENST00000561071	ADGRL2	O95490	1459 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	SCAF11	Q99590	1463 aa	Known RBP	10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	STRCP1	A6NGW2	1772 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	BACH1	O14867	736 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	TLR1	Q15399	786 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	EID1	Q9Y6B2	187 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	PIK3C2B	O00750	1634 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	ANKRD50	Q9ULJ7	1429 aa		10.75	□□□□□ -0.69
MARK3-223	ENST00000561071	ARHGAP23	Q9P227	1491 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071		M0R2N6	131 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	SMTN	P53814	917 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	EPHA4	P54764	986 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	HINFP	Q9BQA5	517 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	USP3	Q9Y6I4	520 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	TMEM2	Q9UHN6	1383 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	LMTK2	Q8IWU2	1503 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	LRRC7	Q96NW7	1537 aa		10.74	□□□□□ -0.69
MARK3-223	ENST00000561071	SYNM	O15061	1565 aa		10.73	□□□□□ -0.69
MARK3-223	ENST00000561071		A6NJY4	79 aa		10.73	□□□□□ -0.69
MARK3-223	ENST00000561071	RNF144A	P50876	292 aa	Predicted RBP	10.73	□□□□□ -0.69
MARK3-223	ENST00000561071	SLC26A8	Q96RN1	970 aa		10.73	□□□□□ -0.69
MARK3-223	ENST00000561071	SLAIN2	Q9P270	581 aa		10.73	□□□□□ -0.69
MARK3-223	ENST00000561071	SOS2	Q07890	1332 aa	Predicted RBP	10.73	□□□□□ -0.69
MARK3-223	ENST00000561071	SLIT1	O75093	1534 aa		10.73	□□□□□ -0.69
MARK3-223	ENST00000561071	FIGNL2	A6NMB9	653 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	TTLL8	A6PVC2	850 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	MTFR1	Q15390	333 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	SLC27A3	Q5K4L6	730 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	TBCEL	Q5QJ74	424 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	GAS2L2	Q8NHY3	880 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	RNF217	Q8TC41	542 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	GMPR2	Q9P2T1	348 aa	Known RBP	10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	NOS1	P29475	1434 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	ALK	Q9UM73	1620 aa		10.72	□□□□□ -0.69
MARK3-223	ENST00000561071	EFCAB6	Q5THR3	1501 aa		10.71	□□□□□ -0.69
MARK3-223	ENST00000561071	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.71	□□□□□ -0.69
MARK3-223	ENST00000561071	GRIP2	Q9C0E4	1043 aa		10.71	□□□□□ -0.69
MARK3-223	ENST00000561071	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.71	□□□□□ -0.69
MARK3-223	ENST00000561071	SOBP	A7XYQ1	873 aa		10.7	□□□□□ -0.7
MARK3-223	ENST00000561071	GPC1	P35052	558 aa		10.7	□□□□□ -0.7
MARK3-223	ENST00000561071	SWI5	Q1ZZU3	235 aa		10.7	□□□□□ -0.7
MARK3-223	ENST00000561071	SLC52A1	Q9NWF4	448 aa		10.7	□□□□□ -0.7
MARK3-223	ENST00000561071	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.7	□□□□□ -0.7
MARK3-223	ENST00000561071	DNMT3L	Q9UJW3	386 aa		10.7	□□□□□ -0.7

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