RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
CCNK-203ENST00000553865 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 MAP9Q49MG5 647 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
CCNK-203ENST00000553865 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
CCNK-203ENST00000553865 USHBP1Q8N6Y0 703 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 BMP2KQ9NSY1 1161 aaPredicted RBP10.59□□□□□ -0.71
CCNK-203ENST00000553865 ECHDC1Q9NTX5 307 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 FOXO3O43524 673 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 JAKMIP3Q5VZ66 844 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 CCDC148Q8NFR7 591 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 TAF4BQ92750 862 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 UBAC1Q9BSL1 405 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 TOM1O60784 492 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 MCM3P25205 808 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 TDO2P48775 406 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 BOLA2Q9H3K6 86 aa10.59□□□□□ -0.71
CCNK-203ENST00000553865 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 SMC1AQ14683 1233 aaKnown RBP10.58□□□□□ -0.72
CCNK-203ENST00000553865 IP6K1Q92551 441 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 IBSPP21815 317 aaPredicted RBP10.58□□□□□ -0.72
CCNK-203ENST00000553865 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
CCNK-203ENST00000553865 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 CFAP57Q96MR6 1250 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 CDCA7Q9BWT1 371 aaPredicted RBP10.58□□□□□ -0.72
CCNK-203ENST00000553865 ANKRD44Q8N8A2 993 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 ANKRD24Q8TF21 1146 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 AIDAQ96BJ3 306 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
CCNK-203ENST00000553865 CEP131Q9UPN4 1083 aa10.58□□□□□ -0.72
CCNK-203ENST00000553865 ALKQ9UM73 1620 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 IFIT1P09914 478 aaKnown RBP10.57□□□□□ -0.72
CCNK-203ENST00000553865 SF3B2Q13435 895 aaKnown RBP10.57□□□□□ -0.72
CCNK-203ENST00000553865 NUP133Q8WUM0 1156 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 SNX21Q969T3 373 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 MED14O60244 1454 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 METTL24Q5JXM2 366 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
CCNK-203ENST00000553865 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCNK-203ENST00000553865 ATP2B2Q01814 1243 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 ZNF287Q9HBT7 754 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 TMOD3Q9NYL9 352 aa10.57□□□□□ -0.72
CCNK-203ENST00000553865 CGNQ9P2M7 1197 aaKnown RBP10.57□□□□□ -0.72
CCNK-203ENST00000553865 DESP17661 470 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 TANGO6Q9C0B7 1094 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 CTAGE5O15320 804 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 MAP3K2Q9Y2U5 619 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 IDH1O75874 414 aaKnown RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 BAG4O95429 457 aaKnown RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 KLHL40Q2TBA0 621 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 RNF187Q5TA31 235 aaPredicted RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 HMG20BQ9P0W2 317 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 POLR1AO95602 1720 aaPredicted RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 EPB41L2O43491 1005 aaKnown RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 HOXB7P09629 217 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 ANAPC15P60006 121 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 CBX1P83916 185 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 ARHGAP29Q52LW3 1261 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 PPP1R42Q7Z4L9 355 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 CCDC8Q9H0W5 538 aaPredicted RBP10.56□□□□□ -0.72
CCNK-203ENST00000553865 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 FILIP1Q7Z7B0 1213 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
CCNK-203ENST00000553865 NRXN1Q9ULB1 1477 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 LRP2BPQ9P2M1 347 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 CCDC97Q96F63 343 aaPredicted RBP10.55□□□□□ -0.72
CCNK-203ENST00000553865 RAI14Q9P0K7 980 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
CCNK-203ENST00000553865 KIAA1328Q86T90 577 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 FERMT3Q86UX7 667 aa10.55□□□□□ -0.72
CCNK-203ENST00000553865 CFAP65Q6ZU64 1925 aaKnown RBP10.55□□□□□ -0.72
CCNK-203ENST00000553865 CCDC175P0C221 793 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 SDSP20132 328 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 CETN2P41208 172 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
CCNK-203ENST00000553865 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 STX6O43752 255 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 IFIT5Q13325 482 aaKnown RBP10.54□□□□□ -0.72
CCNK-203ENST00000553865 PHF23Q9BUL5 403 aaPredicted RBP10.54□□□□□ -0.72
CCNK-203ENST00000553865 FRMPD1Q5SYB0 1578 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 PI4KAP2A4QPH2 592 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 GCOM1H8Y6P7 765 aaPredicted RBP10.54□□□□□ -0.72
CCNK-203ENST00000553865 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 PI4KAP1Q8N8J0 262 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 LRRC59Q96AG4 307 aaKnown RBP10.54□□□□□ -0.72
CCNK-203ENST00000553865 FEZ1Q99689 392 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 PRDM10Q9NQV6 1147 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 SPATA31D1Q6ZQQ2 1576 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 MCM5P33992 734 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 MEIS3Q99687 375 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 A0A087WZG4 1122 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms