RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 TFCP2Q12800 502 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 SASS6Q6UVJ0 657 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 ZNF830Q96NB3 372 aaPredicted RBP14.18□□□□□ -0.14
PRDM16-207ENST00000512462 TRMT112Q9UI30 125 aaKnown RBP14.18□□□□□ -0.14
PRDM16-207ENST00000512462 ME1P48163 572 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 LINS1Q8NG48 757 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 PRIM1P49642 420 aaKnown RBP14.17□□□□□ -0.14
PRDM16-207ENST00000512462 GIMAP6Q6P9H5 292 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 TRIM5Q9C035 493 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 TECPR2O15040 1411 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 USP6P35125 1406 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-207ENST00000512462 BRF1Q92994 677 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 FAM89AQ96GI7 184 aa14.17□□□□□ -0.14
PRDM16-207ENST00000512462 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 ZCRB1Q8TBF4 217 aaKnown RBP14.16□□□□□ -0.14
PRDM16-207ENST00000512462 SPATA32Q96LK8 384 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 HCLS1P14317 486 aaPredicted RBP14.16□□□□□ -0.14
PRDM16-207ENST00000512462 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
PRDM16-207ENST00000512462 CCDC73Q6ZRK6 1079 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 NUP133Q8WUM0 1156 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 SNX21Q969T3 373 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 PNPLA6Q8IY17 1366 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 STX6O43752 255 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 KRT85P78386 507 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 LDHAL6AQ6ZMR3 332 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 SYNE3Q6ZMZ3 975 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
PRDM16-207ENST00000512462 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
PRDM16-207ENST00000512462 DBNDD2Q9BQY9 259 aa14.15□□□□□ -0.14
PRDM16-207ENST00000512462 CPS1P31327 1500 aa14.15□□□□□ -0.14
PRDM16-207ENST00000512462 GOLGA6L6A8MZA4 724 aa14.15□□□□□ -0.14
PRDM16-207ENST00000512462 HIP1O00291 1037 aa14.15□□□□□ -0.14
PRDM16-207ENST00000512462 EVI5LQ96CN4 794 aa14.15□□□□□ -0.14
PRDM16-207ENST00000512462 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
PRDM16-207ENST00000512462 AKAP17AQ02040 695 aaKnown RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 SIRT1Q96EB6 747 aa14.14□□□□□ -0.15
PRDM16-207ENST00000512462 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 SEC62Q99442 399 aaKnown RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 RRAGDQ9NQL2 400 aaPredicted RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 GIGYF1O75420 1035 aaPredicted RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 TRIM29Q14134 588 aa14.14□□□□□ -0.15
PRDM16-207ENST00000512462 ISM2Q6H9L7 571 aa14.14□□□□□ -0.15
PRDM16-207ENST00000512462 USP48Q86UV5 1035 aa14.14□□□□□ -0.15
PRDM16-207ENST00000512462 TNMDQ9H2S6 317 aa14.14□□□□□ -0.15
PRDM16-207ENST00000512462 DDX21Q9NR30 783 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 TLR7Q9NYK1 1049 aaKnown RBP14.14□□□□□ -0.15
PRDM16-207ENST00000512462 LRRC7Q96NW7 1537 aa14.13□□□□□ -0.15
PRDM16-207ENST00000512462 CWC25Q9NXE8 425 aaPredicted RBP14.13□□□□□ -0.15
PRDM16-207ENST00000512462 CCDC24Q8N4L8 307 aa14.13□□□□□ -0.15
PRDM16-207ENST00000512462 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
PRDM16-207ENST00000512462 STK38Q15208 465 aa14.13□□□□□ -0.15
PRDM16-207ENST00000512462 GAS2L3Q86XJ1 694 aa14.13□□□□□ -0.15
PRDM16-207ENST00000512462 NPHP3Q7Z494 1330 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 DHX16O60231 1041 aaKnown RBP14.12□□□□□ -0.15
PRDM16-207ENST00000512462 POLR3DP05423 398 aaPredicted RBP14.12□□□□□ -0.15
PRDM16-207ENST00000512462 RXRAP19793 462 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 PDCP20941 246 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 LRRFIP1Q32MZ4 808 aaKnown RBP14.12□□□□□ -0.15
PRDM16-207ENST00000512462 EAF2Q96CJ1 260 aaPredicted RBP14.12□□□□□ -0.15
PRDM16-207ENST00000512462 JAG2Q9Y219 1238 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 MINDY4BA8MYZ0 360 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 STARD3NLO95772 234 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 ADAMTS13Q76LX8 1427 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 CDC42BPGQ6DT37 1551 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 G3V3G9 751 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 PTH1RQ03431 593 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 TTLL7Q6ZT98 887 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 ANTXR1Q9H6X2 564 aa14.12□□□□□ -0.15
PRDM16-207ENST00000512462 FILIP1Q7Z7B0 1213 aa14.11□□□□□ -0.15
PRDM16-207ENST00000512462 NRDCO43847 1150 aa14.11□□□□□ -0.15
PRDM16-207ENST00000512462 SLFNL1Q499Z3 407 aa14.11□□□□□ -0.15
PRDM16-207ENST00000512462 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
PRDM16-207ENST00000512462 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
PRDM16-207ENST00000512462 KINO60870 393 aaKnown RBP14.11□□□□□ -0.15
PRDM16-207ENST00000512462 GADD45BO75293 160 aaPredicted RBP14.11□□□□□ -0.15
PRDM16-207ENST00000512462 TDO2P48775 406 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 BTG4Q9NY30 223 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 RAI14Q9P0K7 980 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 AATKQ6ZMQ8 1374 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 MON2Q7Z3U7 1717 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 BIN1O00499 593 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 BEND3Q5T5X7 828 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 SNX14Q9Y5W7 946 aa14.1□□□□□ -0.15
PRDM16-207ENST00000512462 SYT1P21579 422 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
PRDM16-207ENST00000512462 CREB3L3Q68CJ9 461 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 NEK1Q96PY6 1258 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 ERICH2A1L162 156 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 EXOC5O00471 708 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 ALDH1L1O75891 902 aa14.09□□□□□ -0.15
PRDM16-207ENST00000512462 MICU3Q86XE3 530 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms