RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
HMGN1-216ENST00000486741 CHST3Q7LGC8 479 aa15.67■□□□□ 0.1
HMGN1-216ENST00000486741 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
HMGN1-216ENST00000486741 DBNDD2Q9BQY9 259 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 NUP133Q8WUM0 1156 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 BRF1Q92994 677 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 SLAIN2Q9P270 581 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 CPS1P31327 1500 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
HMGN1-216ENST00000486741 RAI14Q9P0K7 980 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 AKAP2Q9Y2D5 859 aa15.66■□□□□ 0.1
HMGN1-216ENST00000486741 PKP1Q13835 747 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 STK38Q15208 465 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 SSH3Q8TE77 659 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 AIDAQ96BJ3 306 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
HMGN1-216ENST00000486741 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 HOXB7P09629 217 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 PHKG2P15735 406 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 TPM4P67936 248 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 GCKRQ14397 625 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
HMGN1-216ENST00000486741 ANKRD18BA2A2Z9 1011 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 TDO2P48775 406 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 IMMTQ16891 758 aaKnown RBP15.65■□□□□ 0.1
HMGN1-216ENST00000486741 PIBF1Q8WXW3 757 aa15.65■□□□□ 0.1
HMGN1-216ENST00000486741 ESPNB1AK53 854 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 DHX16O60231 1041 aaKnown RBP15.64■□□□□ 0.09
HMGN1-216ENST00000486741 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 ZNF592Q92610 1267 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 NEK1Q96PY6 1258 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 TRIM5Q9C035 493 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 TNMDQ9H2S6 317 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 R3HCC1Q9Y3T6 440 aaKnown RBP15.64■□□□□ 0.09
HMGN1-216ENST00000486741 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
HMGN1-216ENST00000486741 IGHMBP2P38935 993 aaKnown RBP15.64■□□□□ 0.09
HMGN1-216ENST00000486741 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
HMGN1-216ENST00000486741 SH2B1Q9NRF2 756 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-216ENST00000486741 CTNNA3Q9UI47 895 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 TTC41PQ6P2S7 1318 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 RIMBP3CA6NJZ7 1639 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 RIMBP3BA6NNM3 1639 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 RIMBP3Q9UFD9 1639 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 ANAPC15P60006 121 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 SAFBQ15424 915 aaKnown RBP eCLIP15.63■□□□□ 0.09
HMGN1-216ENST00000486741 TTLL7Q6ZT98 887 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 UBE2Q2Q8WVN8 375 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 EAF2Q96CJ1 260 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-216ENST00000486741 MROH1Q8NDA8 1641 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 MINDY4BA8MYZ0 360 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 CCDC144CPQ8IYA2 1237 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 NOL10Q9BSC4 688 aaKnown RBP15.63■□□□□ 0.09
HMGN1-216ENST00000486741 PES1O00541 588 aaKnown RBP15.63■□□□□ 0.09
HMGN1-216ENST00000486741 DNAJC10Q8IXB1 793 aa15.63■□□□□ 0.09
HMGN1-216ENST00000486741 CREB3L3Q68CJ9 461 aa15.62■□□□□ 0.09
HMGN1-216ENST00000486741 SGSM2O43147 1006 aa15.62■□□□□ 0.09
HMGN1-216ENST00000486741 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
HMGN1-216ENST00000486741 NEURL1BA8MQ27 555 aa15.62■□□□□ 0.09
HMGN1-216ENST00000486741 NPHP4O75161 1426 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-216ENST00000486741 SART3Q15020 963 aaKnown RBP15.61■□□□□ 0.09
HMGN1-216ENST00000486741 USP48Q86UV5 1035 aa15.61■□□□□ 0.09
HMGN1-216ENST00000486741 SNX14Q9Y5W7 946 aa15.61■□□□□ 0.09
HMGN1-216ENST00000486741 ERBB3P21860 1342 aa15.61■□□□□ 0.09
HMGN1-216ENST00000486741 ATP6V1AP38606 617 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 DEPDC5O75140 1603 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 ZNF213O14771 459 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 DNM1Q05193 864 aaKnown RBP15.6■□□□□ 0.09
HMGN1-216ENST00000486741 ZSCAN25Q6NSZ9 544 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 NUP62CLQ9H1M0 184 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 PCDH11XQ9BZA7 1347 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 PCDH11YQ9BZA8 1340 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 CCDC192P0DO97 292 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 IL15P40933 162 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-216ENST00000486741 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 FAM173BQ6P4H8 233 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-216ENST00000486741 NACAP1Q9BZK3 213 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 PAG1Q9NWQ8 432 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 SLC4A8Q2Y0W8 1093 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 MCMDC2Q4G0Z9 681 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 CCDC34Q96HJ3 373 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
HMGN1-216ENST00000486741 ZSCAN22P10073 491 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-216ENST00000486741 GNL3LQ9NVN8 582 aaKnown RBP15.59■□□□□ 0.09
HMGN1-216ENST00000486741 KIF24Q5T7B8 1368 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-216ENST00000486741 CCDC171Q6TFL3 1326 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 TNNI3KQ59H18 835 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 NAPBQ9H115 298 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 FPGT-TNNI3KV9GXZ4 949 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 DDB1Q16531 1140 aa15.59■□□□□ 0.09
HMGN1-216ENST00000486741 GIMAP6Q6P9H5 292 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms