RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NOP53Q9NZM5 478 aaKnown RBP10.51□□□□□ -0.73
CLK1-212ENST00000482590 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
CLK1-212ENST00000482590 GJA3Q9Y6H8 435 aa10.51□□□□□ -0.73
CLK1-212ENST00000482590 BACH1O14867 736 aa10.5□□□□□ -0.73
CLK1-212ENST00000482590 EFSO43281 561 aa10.5□□□□□ -0.73
CLK1-212ENST00000482590 GTF2IP78347 998 aa10.5□□□□□ -0.73
CLK1-212ENST00000482590 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLK1-212ENST00000482590 ZNF358Q9NW07 568 aa10.5□□□□□ -0.73
CLK1-212ENST00000482590 NOD1Q9Y239 953 aa10.5□□□□□ -0.73
CLK1-212ENST00000482590 CHRNA4P43681 627 aa10.49□□□□□ -0.73
CLK1-212ENST00000482590 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
CLK1-212ENST00000482590 MARK1Q9P0L2 795 aa10.49□□□□□ -0.73
CLK1-212ENST00000482590 PRR12Q9ULL5 1215 aa10.49□□□□□ -0.73
CLK1-212ENST00000482590 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
CLK1-212ENST00000482590 NCOA4Q13772 614 aa10.48□□□□□ -0.73
CLK1-212ENST00000482590 NFATC2IPQ8NCF5 419 aa10.48□□□□□ -0.73
CLK1-212ENST00000482590 LZTS3O60299 673 aaPredicted RBP10.47□□□□□ -0.73
CLK1-212ENST00000482590 EPHA4P54764 986 aa10.47□□□□□ -0.73
CLK1-212ENST00000482590 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
CLK1-212ENST00000482590 L3MBTL2Q969R5 705 aa10.47□□□□□ -0.73
CLK1-212ENST00000482590 TRIM11Q96F44 468 aa10.47□□□□□ -0.73
CLK1-212ENST00000482590 ADGRL1O94910 1474 aa10.47□□□□□ -0.73
CLK1-212ENST00000482590 SAMD9Q5K651 1589 aa10.47□□□□□ -0.73
CLK1-212ENST00000482590 PSME1Q06323 249 aa10.46□□□□□ -0.73
CLK1-212ENST00000482590 TEAD4Q15561 434 aa10.46□□□□□ -0.73
CLK1-212ENST00000482590 RAPGEF6Q8TEU7 1601 aa10.46□□□□□ -0.74
CLK1-212ENST00000482590 EML1O00423 815 aa10.45□□□□□ -0.74
CLK1-212ENST00000482590 NOS2P35228 1153 aa10.45□□□□□ -0.74
CLK1-212ENST00000482590 DEPDC4Q8N2C3 294 aa10.45□□□□□ -0.74
CLK1-212ENST00000482590 C7orf43Q8WVR3 580 aa10.45□□□□□ -0.74
CLK1-212ENST00000482590 KIF21BO75037 1637 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 TBCELQ5QJ74 424 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 LRRC69Q6ZNQ3 347 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 SLC9A9Q8IVB4 645 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 MDFIQ99750 246 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 PLVAPQ9BX97 442 aa10.44□□□□□ -0.74
CLK1-212ENST00000482590 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
CLK1-212ENST00000482590 USP17L5A8MUK1 530 aa10.43□□□□□ -0.74
CLK1-212ENST00000482590 SYT9Q86SS6 491 aa10.43□□□□□ -0.74
CLK1-212ENST00000482590 POM121Q96HA1 1249 aa10.43□□□□□ -0.74
CLK1-212ENST00000482590 ABCA9Q8IUA7 1624 aa10.43□□□□□ -0.74
CLK1-212ENST00000482590 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
CLK1-212ENST00000482590 ELOA3CA0A087WX78 387 aaPredicted RBP10.42□□□□□ -0.74
CLK1-212ENST00000482590 ELOA3DA6NLF2 546 aaPredicted RBP10.42□□□□□ -0.74
CLK1-212ENST00000482590 ELOA3BQ3SY89 546 aa10.42□□□□□ -0.74
CLK1-212ENST00000482590 SH3PXD2AQ5TCZ1 1133 aa10.42□□□□□ -0.74
CLK1-212ENST00000482590 ELOA3Q8NG57 546 aa10.42□□□□□ -0.74
CLK1-212ENST00000482590 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
CLK1-212ENST00000482590 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
CLK1-212ENST00000482590 ZNF232Q9UNY5 417 aa10.41□□□□□ -0.74
CLK1-212ENST00000482590 Q8N3U1 123 aa10.4□□□□□ -0.74
CLK1-212ENST00000482590 SERTM1A2A2V5 107 aa10.39□□□□□ -0.75
CLK1-212ENST00000482590 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
CLK1-212ENST00000482590 ITGB7P26010 798 aa10.39□□□□□ -0.75
CLK1-212ENST00000482590 SFSWAPQ12872 951 aaKnown RBP10.39□□□□□ -0.75
CLK1-212ENST00000482590 SLC30A3Q99726 388 aa10.39□□□□□ -0.75
CLK1-212ENST00000482590 KIAA1024Q9UPX6 916 aa10.39□□□□□ -0.75
CLK1-212ENST00000482590 GPC6Q9Y625 555 aaPredicted RBP10.39□□□□□ -0.75
CLK1-212ENST00000482590 EEA1Q15075 1411 aa10.39□□□□□ -0.75
CLK1-212ENST00000482590 SIN3BO75182 1162 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 SPATA31C1P0DKV0 1188 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 ALAS2P22557 587 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 DOC2BQ14184 412 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 WWC1Q8IX03 1113 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 ADAMTS19Q8TE59 1207 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 HECW2Q9P2P5 1572 aa10.38□□□□□ -0.75
CLK1-212ENST00000482590 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
CLK1-212ENST00000482590 ADARB2-AS1A8MUL3 147 aa10.37□□□□□ -0.75
CLK1-212ENST00000482590 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
CLK1-212ENST00000482590 TPCN2Q8NHX9 752 aa10.37□□□□□ -0.75
CLK1-212ENST00000482590 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
CLK1-212ENST00000482590 NEUROD4Q9HD90 331 aa10.37□□□□□ -0.75
CLK1-212ENST00000482590 CLDN10P78369 228 aa10.36□□□□□ -0.75
CLK1-212ENST00000482590 RHPN1Q8TCX5 695 aa10.36□□□□□ -0.75
CLK1-212ENST00000482590 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
CLK1-212ENST00000482590 ATP10BO94823 1461 aa10.36□□□□□ -0.75
CLK1-212ENST00000482590 GATA4P43694 442 aa10.35□□□□□ -0.75
CLK1-212ENST00000482590 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
CLK1-212ENST00000482590 CCDC102BQ68D86 513 aa10.35□□□□□ -0.75
CLK1-212ENST00000482590 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
CLK1-212ENST00000482590 TSPAN10Q9H1Z9 355 aaPredicted RBP10.35□□□□□ -0.75
CLK1-212ENST00000482590 STARD13Q9Y3M8 1113 aa10.35□□□□□ -0.75
CLK1-212ENST00000482590 ARAP3Q8WWN8 1544 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 USP17L3A6NCW0 530 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 USP17L4A6NCW7 530 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 POTEAQ6S8J7 498 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 USP17L1Q7RTZ2 530 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 TNFRSF25Q93038 417 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 UCN2Q96RP3 112 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 SEMA6BQ9H3T3 888 aa10.34□□□□□ -0.75
CLK1-212ENST00000482590 M0R082 166 aa10.33□□□□□ -0.76
CLK1-212ENST00000482590 HIRAP54198 1017 aaPredicted RBP10.33□□□□□ -0.76
CLK1-212ENST00000482590 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
CLK1-212ENST00000482590 SPEM2Q0P670 501 aa10.33□□□□□ -0.76
CLK1-212ENST00000482590 C1orf53Q5VUE5 145 aa10.33□□□□□ -0.76
CLK1-212ENST00000482590 ZNF417Q8TAU3 575 aa10.33□□□□□ -0.76
CLK1-212ENST00000482590 ZNF587Q96SQ5 575 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms