RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 TTLL7Q6ZT98 887 aa22.48■■□□□ 1.19
SREBF1-211ENST00000476994 COPS6Q7L5N1 327 aa22.48■■□□□ 1.19
SREBF1-211ENST00000476994 RBM46Q8TBY0 533 aaKnown RBP22.48■■□□□ 1.19
SREBF1-211ENST00000476994 TNNQ9UQP3 1299 aa22.48■■□□□ 1.19
SREBF1-211ENST00000476994 SUPT16HQ9Y5B9 1047 aaKnown RBP22.48■■□□□ 1.19
SREBF1-211ENST00000476994 CACNA1SQ13698 1873 aa22.47■■□□□ 1.19
SREBF1-211ENST00000476994 ST5P78524 1137 aa22.47■■□□□ 1.19
SREBF1-211ENST00000476994 ZNF622Q969S3 477 aaKnown RBP eCLIP22.47■■□□□ 1.19
SREBF1-211ENST00000476994 BRIP1Q9BX63 1249 aa22.47■■□□□ 1.19
SREBF1-211ENST00000476994 ZNF652Q9Y2D9 606 aa22.47■■□□□ 1.19
SREBF1-211ENST00000476994 TIAM2Q8IVF5 1701 aa22.46■■□□□ 1.19
SREBF1-211ENST00000476994 PLIN1O60240 522 aa22.46■■□□□ 1.19
SREBF1-211ENST00000476994 TRIM27P14373 513 aa22.46■■□□□ 1.19
SREBF1-211ENST00000476994 DZIP3Q86Y13 1208 aaKnown RBP22.46■■□□□ 1.19
SREBF1-211ENST00000476994 CNBD1Q8NA66 436 aa22.46■■□□□ 1.19
SREBF1-211ENST00000476994 RASSF7Q02833 373 aa22.45■■□□□ 1.18
SREBF1-211ENST00000476994 ZKSCAN2Q63HK3 967 aa22.45■■□□□ 1.18
SREBF1-211ENST00000476994 ATF7IPQ6VMQ6 1270 aa22.45■■□□□ 1.18
SREBF1-211ENST00000476994 ABCC4O15439 1325 aa22.44■■□□□ 1.18
SREBF1-211ENST00000476994 PRR5LQ6MZQ0 368 aa22.44■■□□□ 1.18
SREBF1-211ENST00000476994 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
SREBF1-211ENST00000476994 RRAGCQ9HB90 399 aa22.44■■□□□ 1.18
SREBF1-211ENST00000476994 DICER1Q9UPY3 1922 aaKnown RBP22.44■■□□□ 1.18
SREBF1-211ENST00000476994 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
SREBF1-211ENST00000476994 CAMTA2O94983 1202 aa22.43■■□□□ 1.18
SREBF1-211ENST00000476994 FSTL1Q12841 308 aa22.43■■□□□ 1.18
SREBF1-211ENST00000476994 AIMP1Q12904 312 aaKnown RBP22.43■■□□□ 1.18
SREBF1-211ENST00000476994 FKBP5Q13451 457 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-211ENST00000476994 COL11A2P13942 1736 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-211ENST00000476994 MAP3K15Q6ZN16 1313 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 F6X3S4 739 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 IPO8O15397 1037 aaKnown RBP22.42■■□□□ 1.18
SREBF1-211ENST00000476994 RLBP1P12271 317 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 CLEC4GQ6UXB4 293 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 KSR2Q6VAB6 950 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 PLBD2Q8NHP8 589 aa22.42■■□□□ 1.18
SREBF1-211ENST00000476994 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
SREBF1-211ENST00000476994 FER1L6Q2WGJ9 1857 aa22.41■■□□□ 1.18
SREBF1-211ENST00000476994 C20orf194Q5TEA3 1177 aa22.41■■□□□ 1.18
SREBF1-211ENST00000476994 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
SREBF1-211ENST00000476994 CNKSR1Q969H4 720 aa22.41■■□□□ 1.18
SREBF1-211ENST00000476994 NBPF5PQ86XG9 351 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-211ENST00000476994 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-211ENST00000476994 GLTPD2A6NH11 291 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 ERVV-1B6SEH8 477 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 DDX58O95786 925 aaKnown RBP22.39■■□□□ 1.17
SREBF1-211ENST00000476994 SOGA3Q5TF21 947 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 DPY19L2Q6NUT2 758 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 CCDC24Q8N4L8 307 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 DNAAF4Q8WXU2 420 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 ZBTB3Q9H5J0 574 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 MAP3K2Q9Y2U5 619 aa22.39■■□□□ 1.17
SREBF1-211ENST00000476994 RGL2O15211 777 aa22.38■■□□□ 1.17
SREBF1-211ENST00000476994 C21orf2O43822 256 aa22.38■■□□□ 1.17
SREBF1-211ENST00000476994 VEGFAP15692 232 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-211ENST00000476994 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
SREBF1-211ENST00000476994 HLFQ16534 295 aa22.38■■□□□ 1.17
SREBF1-211ENST00000476994 SMC1BQ8NDV3 1235 aa22.38■■□□□ 1.17
SREBF1-211ENST00000476994 ZNF219Q9P2Y4 722 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-211ENST00000476994 STYK1Q6J9G0 422 aa22.37■■□□□ 1.17
SREBF1-211ENST00000476994 GIGYF2Q6Y7W6 1299 aaKnown RBP22.37■■□□□ 1.17
SREBF1-211ENST00000476994 KIF6Q6ZMV9 814 aa22.37■■□□□ 1.17
SREBF1-211ENST00000476994 DZIP1LQ8IYY4 767 aaKnown RBP22.37■■□□□ 1.17
SREBF1-211ENST00000476994 PANK1Q8TE04 598 aa22.37■■□□□ 1.17
SREBF1-211ENST00000476994 CLUAP1Q96AJ1 413 aa22.37■■□□□ 1.17
SREBF1-211ENST00000476994 MASTLQ96GX5 879 aa22.37■■□□□ 1.17
SREBF1-211ENST00000476994 METTL22Q9BUU2 404 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-211ENST00000476994 TPTE2Q6XPS3 522 aa22.36■■□□□ 1.17
SREBF1-211ENST00000476994 RIC3Q7Z5B4 369 aa22.36■■□□□ 1.17
SREBF1-211ENST00000476994 IBTKQ9P2D0 1353 aaPredicted RBP22.36■■□□□ 1.17
SREBF1-211ENST00000476994 SLX4Q8IY92 1834 aa22.36■■□□□ 1.17
SREBF1-211ENST00000476994 NFKBIEO00221 500 aa22.35■■□□□ 1.17
SREBF1-211ENST00000476994 ERFEQ4G0M1 354 aa22.35■■□□□ 1.17
SREBF1-211ENST00000476994 BEND3Q5T5X7 828 aa22.35■■□□□ 1.17
SREBF1-211ENST00000476994 INTS3Q68E01 1043 aaKnown RBP22.35■■□□□ 1.17
SREBF1-211ENST00000476994 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
SREBF1-211ENST00000476994 TAOK3Q9H2K8 898 aa22.35■■□□□ 1.17
SREBF1-211ENST00000476994 IGKV5-2P06315 115 aa22.34■■□□□ 1.17
SREBF1-211ENST00000476994 SRGNP10124 158 aa22.34■■□□□ 1.17
SREBF1-211ENST00000476994 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
SREBF1-211ENST00000476994 GTF2E1P29083 439 aaPredicted RBP22.33■■□□□ 1.17
SREBF1-211ENST00000476994 TCIRG1Q13488 830 aa22.33■■□□□ 1.17
SREBF1-211ENST00000476994 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.17
SREBF1-211ENST00000476994 ISCA1Q9BUE6 129 aa22.33■■□□□ 1.17
SREBF1-211ENST00000476994 MS4A1P11836 297 aa22.32■■□□□ 1.16
SREBF1-211ENST00000476994 IFFO2Q5TF58 517 aa22.32■■□□□ 1.16
SREBF1-211ENST00000476994 LAMB2P55268 1798 aa22.32■■□□□ 1.16
SREBF1-211ENST00000476994 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
SREBF1-211ENST00000476994 PRELPP51888 382 aa22.31■■□□□ 1.16
SREBF1-211ENST00000476994 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
SREBF1-211ENST00000476994 FTSJ3Q8IY81 847 aaKnown RBP22.31■■□□□ 1.16
SREBF1-211ENST00000476994 ZNF34Q8IZ26 560 aa22.31■■□□□ 1.16
SREBF1-211ENST00000476994 LINS1Q8NG48 757 aa22.31■■□□□ 1.16
SREBF1-211ENST00000476994 MYD88Q99836 296 aa22.31■■□□□ 1.16
SREBF1-211ENST00000476994 MYH3P11055 1940 aa22.3■■□□□ 1.16
SREBF1-211ENST00000476994 NPR1P16066 1061 aa22.3■■□□□ 1.16
SREBF1-211ENST00000476994 CCT4P50991 539 aaKnown RBP22.3■■□□□ 1.16
SREBF1-211ENST00000476994 TRIM28Q13263 835 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms