RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 C1orf141Q5JVX7 400 aa6.4□□□□□ -1.39
RIF1-207ENST00000454583 CEP85Q6P2H3 762 aa6.4□□□□□ -1.39
RIF1-207ENST00000454583 EXOC6Q8TAG9 804 aa6.4□□□□□ -1.39
RIF1-207ENST00000454583 KCNA3P22001 575 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 CACNB1Q02641 598 aaPredicted RBP6.39□□□□□ -1.39
RIF1-207ENST00000454583 FAM182BQ5T319 152 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 GIGYF2Q6Y7W6 1299 aaKnown RBP6.39□□□□□ -1.39
RIF1-207ENST00000454583 C3orf67Q6ZVT6 689 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 UPF1Q92900 1129 aaKnown RBP eCLIP6.39□□□□□ -1.39
RIF1-207ENST00000454583 PTPRFP10586 1907 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 MYH2Q9UKX2 1941 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 PDE4AP27815 886 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 PTGER2P43116 358 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 CABP4P57796 275 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 SNRKQ9NRH2 765 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 TMOD3Q9NYL9 352 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 ALDH1L1O75891 902 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 GYS1P13807 737 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 CCDC30Q5VVM6 783 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 CLEC4GQ6UXB4 293 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 PANK1Q8TE04 598 aa6.39□□□□□ -1.39
RIF1-207ENST00000454583 POLRMTO00411 1230 aaKnown RBP6.38□□□□□ -1.39
RIF1-207ENST00000454583 NBPF7P0C2Y1 421 aaPredicted RBP6.38□□□□□ -1.39
RIF1-207ENST00000454583 SSFA2P28290 1259 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 DDR1Q08345 913 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 GCKRQ14397 625 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 LMOD2Q6P5Q4 547 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 ATG9AQ7Z3C6 839 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 PELP1Q8IZL8 1130 aaKnown RBP6.38□□□□□ -1.39
RIF1-207ENST00000454583 NARFQ9UHQ1 456 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
RIF1-207ENST00000454583 EVA1CP58658 441 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 NLRP10Q86W26 655 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 TEX13AQ9BXU3 409 aaPredicted RBP6.38□□□□□ -1.39
RIF1-207ENST00000454583 RBBP6Q7Z6E9 1792 aaKnown RBP6.38□□□□□ -1.39
RIF1-207ENST00000454583 SLC51AQ86UW1 340 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 C7orf43Q8WVR3 580 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 CCDC87Q9NVE4 849 aa6.38□□□□□ -1.39
RIF1-207ENST00000454583 SCN4AP35499 1836 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 ZKSCAN2Q63HK3 967 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 AK7Q96M32 723 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 MEIS3Q99687 375 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 OSBPL3Q9H4L5 887 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 LRRC37A2A6NM11 1700 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 TCIRG1Q13488 830 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 NEUROD2Q15784 382 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 SMARCC1Q92922 1105 aaPredicted RBP6.37□□□□□ -1.39
RIF1-207ENST00000454583 DCTPP1Q9H773 170 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 MYH8P13535 1937 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 PNMA6EA0A0J9YXQ4 647 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 TXNRD1Q16881 649 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 RFX7Q2KHR2 1363 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 CCDC125Q86Z20 511 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 LINS1Q8NG48 757 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
RIF1-207ENST00000454583 ARHGEF1Q92888 912 aaKnown RBP6.37□□□□□ -1.39
RIF1-207ENST00000454583 MYH1P12882 1939 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 ANXA1P04083 346 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 FGFR2P21802 821 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 C8orf34Q49A92 452 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 DZIP1LQ8IYY4 767 aaKnown RBP6.36□□□□□ -1.39
RIF1-207ENST00000454583 DDX54Q8TDD1 881 aaKnown RBP6.36□□□□□ -1.39
RIF1-207ENST00000454583 HDGFL1Q5TGJ6 251 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 COL23A1Q86Y22 540 aaPredicted RBP6.36□□□□□ -1.39
RIF1-207ENST00000454583 ACSBG1Q96GR2 724 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 SUCLG2Q96I99 432 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 PDGFDQ9GZP0 370 aaPredicted RBP6.36□□□□□ -1.39
RIF1-207ENST00000454583 PI4KAP2A4QPH2 592 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 F6X3S4 739 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 PCCAP05165 728 aaPredicted RBP6.36□□□□□ -1.39
RIF1-207ENST00000454583 COPS6Q7L5N1 327 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 PI4KAP1Q8N8J0 262 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 DNAAF4Q8WXU2 420 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 CLUAP1Q96AJ1 413 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 MAP3K2Q9Y2U5 619 aa6.36□□□□□ -1.39
RIF1-207ENST00000454583 LCTP09848 1927 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 MS4A1P11836 297 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 PTPN12Q05209 780 aaKnown RBP6.35□□□□□ -1.39
RIF1-207ENST00000454583 CNGB1Q14028 1251 aaPredicted RBP6.35□□□□□ -1.39
RIF1-207ENST00000454583 SF3B3Q15393 1217 aaKnown RBP6.35□□□□□ -1.39
RIF1-207ENST00000454583 TBC1D9BQ66K14 1250 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 SMIM5Q71RC9 77 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 RTF1Q92541 710 aaKnown RBP6.35□□□□□ -1.39
RIF1-207ENST00000454583 CSB-PGBD3P0DP91 1061 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 HOXA10P31260 410 aaPredicted RBP6.35□□□□□ -1.39
RIF1-207ENST00000454583 ATP8B2P98198 1209 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 NUCB1Q02818 461 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 SUSD4Q5VX71 490 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 CCDC191Q8NCU4 936 aa6.35□□□□□ -1.39
RIF1-207ENST00000454583 SASH1O94885 1247 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 IRX6P78412 446 aaPredicted RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 EZH2Q15910 746 aaKnown RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 B4GALNT3Q6L9W6 998 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 COPRSQ9NQ92 184 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 STAP2Q9UGK3 403 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 ZNF804BA4D1E1 1349 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 PIP4K2AP48426 406 aaPredicted RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 TEFQ10587 303 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 CWF19L2Q2TBE0 894 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms