RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 KLF18A0A0U1RQI7 1052 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 NMIQ13287 307 aaPredicted RBP19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 PKNOX2Q96KN3 472 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 CCDC66A2RUB6 948 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 CCDC186Q7Z3E2 898 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 H0YHG0 523 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 MKNK2Q9HBH9 465 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 ODF2Q5BJF6 829 aa19.92■□□□□ 0.78
SLC1A4-201ENST00000234256 TMEM67Q5HYA8 995 aa19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 LINS1Q8NG48 757 aa19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 CCDC196A0A1B0GTZ2 297 aa19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 F13A1P00488 732 aa19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 CCDC181Q5TID7 509 aa19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 CTCFLQ8NI51 663 aaPredicted RBP19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 UHRF1BP1Q6BDS2 1440 aa19.91■□□□□ 0.78
SLC1A4-201ENST00000234256 CTAGE5O15320 804 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 FAM173BQ6P4H8 233 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 TNRQ92752 1358 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 ANO6Q4KMQ2 910 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 CAVIN4Q5BKX8 364 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 IQCA1Q86XH1 822 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 PUS7Q96PZ0 661 aaKnown RBP19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 Q6ZUG5 572 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 CENPHQ9H3R5 247 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 ARHGEF12Q9NZN5 1544 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 NPATQ14207 1427 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 HSP90AB3PQ58FF7 597 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 DNAJC25Q9H1X3 360 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 HMG20BQ9P0W2 317 aa19.9■□□□□ 0.78
SLC1A4-201ENST00000234256 SPDYE4A6NLX3 237 aa19.89■□□□□ 0.78
SLC1A4-201ENST00000234256 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.77
SLC1A4-201ENST00000234256 TTC21AQ8NDW8 1320 aa19.89■□□□□ 0.77
SLC1A4-201ENST00000234256 KIF4BQ2VIQ3 1234 aa19.89■□□□□ 0.77
SLC1A4-201ENST00000234256 KLHDC4Q8TBB5 520 aa19.89■□□□□ 0.77
SLC1A4-201ENST00000234256 CCDC102AQ96A19 550 aa19.89■□□□□ 0.77
SLC1A4-201ENST00000234256 IL13P35225 146 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 SOS1Q07889 1333 aaPredicted RBP19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 LEKR1Q6ZMV7 388 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 ALDH1L1O75891 902 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 SYT1P21579 422 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 ENOX2Q16206 610 aaKnown RBP19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 KIAA1328Q86T90 577 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 CEP131Q9UPN4 1083 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 RBM25P49756 843 aaKnown RBP19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 CDR1P51861 262 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 ZSWIM4Q9H7M6 989 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
SLC1A4-201ENST00000234256 SLC5A1P13866 664 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 MARCKSP29966 332 aaPredicted RBP19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 STX1AQ16623 288 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 TMCO3Q6UWJ1 677 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 TSPYL1Q9H0U9 437 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 MSH6P52701 1360 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 SSRP1Q08945 709 aaKnown RBP19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 NCOA7Q8NI08 942 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 BMP2KQ9NSY1 1161 aaPredicted RBP19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 DNA2P51530 1060 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 NOLC1Q14978 699 aaKnown RBP eCLIP19.87■□□□□ 0.773e-6■■■■■ 34
SLC1A4-201ENST00000234256 UHRF1BP1LA0JNW5 1464 aa19.87■□□□□ 0.77
SLC1A4-201ENST00000234256 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 ZKSCAN5Q9Y2L8 839 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 FLT4P35916 1363 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 ERLIN1O75477 346 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 AKAP4Q5JQC9 854 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 KCNA6P17658 529 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 PDCL3Q9H2J4 239 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 PPP1R1BQ9UD71 204 aaPredicted RBP19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 MCMDC2Q4G0Z9 681 aa19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 DZIP1Q86YF9 867 aaKnown RBP19.86■□□□□ 0.77
SLC1A4-201ENST00000234256 MCM5P33992 734 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 CREB3L3Q68CJ9 461 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 FAM200AQ8TCP9 573 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 CWC15Q9P013 229 aaKnown RBP19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 EXOC5O00471 708 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 NLRP5P59047 1200 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 HELBQ8NG08 1087 aaPredicted RBP19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 ANKIB1Q9P2G1 1089 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 UVSSAQ2YD98 709 aa19.85■□□□□ 0.77
SLC1A4-201ENST00000234256 CHL1O00533 1208 aa19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 POLR3GO15318 223 aaPredicted RBP19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 GCP02774 474 aa19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 ZSCAN16Q9H4T2 348 aaPredicted RBP19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 ATP2B3Q16720 1220 aa19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 NPC1L1Q9UHC9 1359 aa19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 SBNO2Q9Y2G9 1366 aa19.84■□□□□ 0.77
SLC1A4-201ENST00000234256 ZSCAN12O43309 604 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 CCDC102BQ68D86 513 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 RBSNQ9H1K0 784 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 GCC2Q8IWJ2 1684 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 KIF2AO00139 706 aaPredicted RBP19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 TIMM10P62072 90 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 SLC9C2Q5TAH2 1124 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 VAT1LQ9HCJ6 419 aa19.83■□□□□ 0.77
SLC1A4-201ENST00000234256 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms