RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Nol12Q8BG17 217 aa18.69■□□□□ 0.58
Vcan-201ENSMUST00000109543 Kcnb2A6H8H5 907 aa18.68■□□□□ 0.58
Vcan-201ENSMUST00000109543 Erbb4Q61527 1308 aa18.68■□□□□ 0.58
Vcan-201ENSMUST00000109543 Cchcr1Q8K2I2 770 aa18.68■□□□□ 0.58
Vcan-201ENSMUST00000109543 Tbc1d4Q8BYJ6 1307 aa18.68■□□□□ 0.58
Vcan-201ENSMUST00000109543 Ugt1a5B2RT14 529 aa18.67■□□□□ 0.58
Vcan-201ENSMUST00000109543 Dmrt2Q8BG36 561 aa18.67■□□□□ 0.58
Vcan-201ENSMUST00000109543 Clcn1Q64347 994 aa18.67■□□□□ 0.58
Vcan-201ENSMUST00000109543 Smim5Q8BT42 78 aa18.67■□□□□ 0.58
Vcan-201ENSMUST00000109543 Plcd4Q8K3R3 807 aa18.67■□□□□ 0.58
Vcan-201ENSMUST00000109543 4931400O07RikQ9D4M5 137 aa18.67■□□□□ 0.58
Vcan-201ENSMUST00000109543 Rbbp8nlA2ABX0 614 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 AU015836B2RUM3 263 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Smc3Q9CW03 1217 aaKnown RBP18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Cwc25Q9DBF7 416 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Stard3nlQ9DCI3 235 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Zfp804bA0A0G2JGH6 1343 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 PtmaP26350 111 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Kif20aP97329 887 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Pkp1P97350 728 aaKnown RBP18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Polr3dQ91WD1 398 aa18.66■□□□□ 0.58
Vcan-201ENSMUST00000109543 Pard3Q99NH2 1333 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 Brwd3A2AHJ4 1799 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 AK157302I3ITR1 129 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 Sult6b1P0CC03 303 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 Vps54Q5SPW0 977 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 Isca1Q9D924 129 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 Ltb4r2Q9JJL9 360 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 1700006A11RikB9EHI3 544 aa18.65■□□□□ 0.58
Vcan-201ENSMUST00000109543 Ank1Q02357 1862 aa18.64■□□□□ 0.57
Vcan-201ENSMUST00000109543 Prl3d3A0A0M6L0J6 224 aa18.64■□□□□ 0.57
Vcan-201ENSMUST00000109543 Myd88P22366 296 aa18.64■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ppp4r3aQ6P2K6 820 aa18.64■□□□□ 0.57
Vcan-201ENSMUST00000109543 Bms1Q6PGF5 1284 aaKnown RBP18.64■□□□□ 0.57
Vcan-201ENSMUST00000109543 Rrs1Q9CYH6 365 aaKnown RBP18.64■□□□□ 0.57
Vcan-201ENSMUST00000109543 Mrpl50Q8VDT9 159 aaKnown RBP18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Stx6Q9JKK1 255 aa18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Mybbp1aQ7TPV4 1344 aaKnown RBP18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Syce3B5KM66 88 aa18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Nlrp1aQ2LKU9 1182 aa18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Atf7Q8R0S1 413 aa18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Tceanc2Q8R2M0 207 aa18.63■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ccnl1Q52KE7 532 aaKnown RBP18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ccar2Q8VDP4 922 aaKnown RBP18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 StrbpQ91WM1 672 aaKnown RBP18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Glipr1l2Q9CQ35 332 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Cap2Q9CYT6 476 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ddx46Q569Z5 1032 aaKnown RBP18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Rnf20Q5DTM8 973 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Gm12185Q5NCB2 835 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Atg9aQ68FE2 551 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 SnrkQ8VDU5 748 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Chmp3Q9CQ10 224 aa18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Psma5Q9Z2U1 241 aaKnown RBP18.62■□□□□ 0.57
Vcan-201ENSMUST00000109543 Kif4P33174 1231 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ankib1Q6ZPS6 1085 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Amer1Q7TS75 1132 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Sp8Q8BMJ8 486 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ehd4Q9EQP2 541 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 PhaxQ9JJT9 385 aaKnown RBP18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Trim44Q9QXA7 346 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Tmc2Q8R4P4 888 aa18.61■□□□□ 0.57
Vcan-201ENSMUST00000109543 Smg7Q5RJH6 1138 aaKnown RBP18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 NfkbibQ60778 359 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Gripap1Q8VD04 806 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 AtrnQ9WU60 1428 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Mrc1Q61830 1456 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Prl3d2F6R3P9 224 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Timm10P62073 90 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Smc4Q8CG47 1286 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 ApobrQ8VBT6 942 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Fam213aQ9CYH2 218 aa18.6■□□□□ 0.57
Vcan-201ENSMUST00000109543 Crb1Q8VHS2 1405 aa18.59■□□□□ 0.57
Vcan-201ENSMUST00000109543 Usp48Q3V0C5 1052 aa18.59■□□□□ 0.57
Vcan-201ENSMUST00000109543 Nek11Q8C0Q4 628 aa18.59■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ric1Q69ZJ7 1422 aa18.59■□□□□ 0.57
Vcan-201ENSMUST00000109543 Ttc19Q8CC21 365 aa18.58■□□□□ 0.57
Vcan-201ENSMUST00000109543 Rps6kb1Q8BSK8 525 aa18.58■□□□□ 0.56
Vcan-201ENSMUST00000109543 AbraQ8BUZ1 375 aa18.58■□□□□ 0.56
Vcan-201ENSMUST00000109543 DpydQ8CHR6 1025 aa18.58■□□□□ 0.56
Vcan-201ENSMUST00000109543 Sos2Q02384 1333 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 NpeppsQ11011 920 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 RubcnlQ3TD16 648 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 Wdr93Q402B2 695 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 Mylk2Q8VCR8 613 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 Hmg20bQ9Z104 317 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 Golim4Q8BXA1 655 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 Tsr2Q8C8T8 191 aa18.57■□□□□ 0.56
Vcan-201ENSMUST00000109543 Eya2O08575 532 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Igflr1Q3U4N7 345 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 EappQ5BU09 281 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Adam1aQ60813 791 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Kank4Q6P9J5 1016 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Shank3Q4ACU6 1730 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Bmp2kQ91Z96 1138 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Pus3Q9JI38 481 aa18.56■□□□□ 0.56
Vcan-201ENSMUST00000109543 Eef2kO08796 724 aa18.55■□□□□ 0.56
Vcan-201ENSMUST00000109543 Rbm27Q5SFM8 1060 aaKnown RBP18.55■□□□□ 0.56
Vcan-201ENSMUST00000109543 Fam102bQ8BQS4 339 aa18.55■□□□□ 0.56
Vcan-201ENSMUST00000109543 Ccdc129Q14B48 1034 aa18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms