RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Ankrd31A0A140LI88 1765 aa18.06■□□□□ 0.48
Trim11-203ENSMUST00000108810 Prl3d2F6R3P9 224 aa18.06■□□□□ 0.48
Trim11-203ENSMUST00000108810 Pm20d1Q8C165 503 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Jmjd4Q8BFT6 427 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Tmc2Q8R4P4 888 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Top1mtQ8R4U6 593 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Nip7Q9CXK8 180 aaKnown RBP18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Ccdc7Q9D541 371 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Add2Q9QYB8 725 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Pde4dQ01063 747 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Adam1aQ60813 791 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Gnl3lQ6PGG6 577 aaKnown RBP18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Ssh1Q76I79 1042 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Fam102bQ8BQS4 339 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Rhot2Q8JZN7 620 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Zbtb1Q91VL9 713 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Zkscan1Q8BGS3 561 aaKnown RBP18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Neurod6P48986 337 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 EvcP57680 1005 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 NfkbibQ60778 359 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Pdzrn3Q69ZS0 1063 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 NexnQ7TPW1 607 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Clca2Q8BG22 942 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Phactr2B1AVP0 632 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 AppP12023 770 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 Cyp19a1P28649 503 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 Ifit2Q64112 472 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 Vps33bP59016 617 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Utp18Q5SSI6 552 aaKnown RBP18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ubxn10Q8BG34 277 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Smc4Q8CG47 1286 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Psrc1Q9D0P7 329 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ddb1Q3U1J4 1140 aaKnown RBP18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbm27Q5SFM8 1060 aaKnown RBP18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bloc1s4Q8VED2 215 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ddx11Q6AXC6 880 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Slx4ipQ9D7Y9 413 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Lrp5Q91VN0 1614 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Eya2O08575 532 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ttc19Q8CC21 365 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ciao1Q99KN2 339 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Myh1Q5SX40 1942 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbbp8nlA2ABX0 614 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Plcb3P51432 1234 aaKnown RBP17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rrs1Q9CYH6 365 aaKnown RBP17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Lama4P97927 1816 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Kcnb2A6H8H5 907 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Hspa1lP16627 641 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Zdhhc9P59268 364 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 ZyxQ62523 564 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Mdm2P23804 489 aa17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ccdc9Q8VC31 543 aaKnown RBP17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Gdpd2Q9ESM6 539 aa17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Vps54Q5SPW0 977 aa17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Fkbp1aP26883 108 aaKnown RBP17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Igflr1Q3U4N7 345 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 KinQ8K339 391 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Smarce1O54941 411 aaKnown RBP17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Gjb2Q00977 226 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Filip1lQ6P6L0 1131 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ints3Q7TPD0 1041 aaKnown RBP17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bcl11aQ9QYE3 773 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ak2Q9WTP6 239 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Nphp3Q7TNH6 1325 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbm8a2A0A0N4SUH6 174 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Strn4P58404 760 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Dmrt2Q8BG36 561 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bag4Q8CI61 457 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Nlrp3Q8R4B8 1033 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bmp2kQ91Z96 1138 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbm8aQ9CWZ3 174 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Timm10P62073 90 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 DiexfQ8BTT6 772 aaKnown RBP17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Prr5lA2AVJ5 370 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Mcm4P49717 862 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Atp6v1dP57746 247 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Sgsm2Q80U12 1005 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 GptQ8QZR5 496 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Chmp3Q9CQ10 224 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Elmsan1E9Q2I4 1089 aaKnown RBP17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 SnrkQ8VDU5 748 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ncoa5Q91W39 579 aaKnown RBP17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Chmp4cQ9D7F7 232 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 RubcnlQ3TD16 648 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ddx19aQ61655 478 aaKnown RBP17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Tti2Q8BGV4 512 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Rufy3Q9D394 469 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Plcb2A3KGF7 1181 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Rasa1E9PYG6 1038 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Slc4a1P04919 929 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Asap2Q7SIG6 958 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Slfnl1Q8BHW9 410 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 StrbpQ91WM1 672 aaKnown RBP17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ugt1a5B2RT14 529 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Gsdma2Q32M21 443 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ddx46Q569Z5 1032 aaKnown RBP17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Slc5a4bQ91ZP4 660 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Foxo4Q9WVH3 505 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ltbp1Q8CG19 1712 aa17.92■□□□□ 0.46
Trim11-203ENSMUST00000108810 Cops6O88545 324 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms