RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Ankrd31A0A140LI88 1765 aa18.06■□□□□ 0.48
Trim11-203ENSMUST00000108810 Prl3d2F6R3P9 224 aa18.06■□□□□ 0.48
Trim11-203ENSMUST00000108810 Pm20d1Q8C165 503 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Jmjd4Q8BFT6 427 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Tmc2Q8R4P4 888 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Top1mtQ8R4U6 593 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Nip7Q9CXK8 180 aaKnown RBP18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Ccdc7Q9D541 371 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Add2Q9QYB8 725 aa18.05■□□□□ 0.48
Trim11-203ENSMUST00000108810 Pde4dQ01063 747 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Adam1aQ60813 791 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Gnl3lQ6PGG6 577 aaKnown RBP18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Ssh1Q76I79 1042 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Fam102bQ8BQS4 339 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Rhot2Q8JZN7 620 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Zbtb1Q91VL9 713 aa18.04■□□□□ 0.48
Trim11-203ENSMUST00000108810 Zkscan1Q8BGS3 561 aaKnown RBP18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Neurod6P48986 337 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 EvcP57680 1005 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 NfkbibQ60778 359 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Pdzrn3Q69ZS0 1063 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 NexnQ7TPW1 607 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Clca2Q8BG22 942 aa18.03■□□□□ 0.48
Trim11-203ENSMUST00000108810 Phactr2B1AVP0 632 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 AppP12023 770 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 Cyp19a1P28649 503 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 Ifit2Q64112 472 aa18.02■□□□□ 0.48
Trim11-203ENSMUST00000108810 Vps33bP59016 617 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Utp18Q5SSI6 552 aaKnown RBP18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ubxn10Q8BG34 277 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Smc4Q8CG47 1286 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Psrc1Q9D0P7 329 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ddb1Q3U1J4 1140 aaKnown RBP18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbm27Q5SFM8 1060 aaKnown RBP18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bloc1s4Q8VED2 215 aa18.01■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ddx11Q6AXC6 880 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Slx4ipQ9D7Y9 413 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Lrp5Q91VN0 1614 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Eya2O08575 532 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ttc19Q8CC21 365 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ciao1Q99KN2 339 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Myh1Q5SX40 1942 aa18■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbbp8nlA2ABX0 614 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Plcb3P51432 1234 aaKnown RBP17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rrs1Q9CYH6 365 aaKnown RBP17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Lama4P97927 1816 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Kcnb2A6H8H5 907 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Hspa1lP16627 641 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Zdhhc9P59268 364 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 ZyxQ62523 564 aa17.99■□□□□ 0.47
Trim11-203ENSMUST00000108810 Mdm2P23804 489 aa17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ccdc9Q8VC31 543 aaKnown RBP17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Gdpd2Q9ESM6 539 aa17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Vps54Q5SPW0 977 aa17.98■□□□□ 0.47
Trim11-203ENSMUST00000108810 Fkbp1aP26883 108 aaKnown RBP17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Igflr1Q3U4N7 345 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 KinQ8K339 391 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Smarce1O54941 411 aaKnown RBP17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Gjb2Q00977 226 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Filip1lQ6P6L0 1131 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ints3Q7TPD0 1041 aaKnown RBP17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bcl11aQ9QYE3 773 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Ak2Q9WTP6 239 aa17.97■□□□□ 0.47
Trim11-203ENSMUST00000108810 Nphp3Q7TNH6 1325 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbm8a2A0A0N4SUH6 174 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Strn4P58404 760 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Dmrt2Q8BG36 561 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bag4Q8CI61 457 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Nlrp3Q8R4B8 1033 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Bmp2kQ91Z96 1138 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Rbm8aQ9CWZ3 174 aa17.96■□□□□ 0.47
Trim11-203ENSMUST00000108810 Timm10P62073 90 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 DiexfQ8BTT6 772 aaKnown RBP17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Prr5lA2AVJ5 370 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Mcm4P49717 862 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Atp6v1dP57746 247 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Sgsm2Q80U12 1005 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 GptQ8QZR5 496 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Chmp3Q9CQ10 224 aa17.95■□□□□ 0.46
Trim11-203ENSMUST00000108810 Elmsan1E9Q2I4 1089 aaKnown RBP17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 SnrkQ8VDU5 748 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ncoa5Q91W39 579 aaKnown RBP17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Chmp4cQ9D7F7 232 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 RubcnlQ3TD16 648 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ddx19aQ61655 478 aaKnown RBP17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Tti2Q8BGV4 512 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Rufy3Q9D394 469 aa17.94■□□□□ 0.46
Trim11-203ENSMUST00000108810 Plcb2A3KGF7 1181 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Rasa1E9PYG6 1038 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Slc4a1P04919 929 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Asap2Q7SIG6 958 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Slfnl1Q8BHW9 410 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 StrbpQ91WM1 672 aaKnown RBP17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ugt1a5B2RT14 529 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Gsdma2Q32M21 443 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ddx46Q569Z5 1032 aaKnown RBP17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Slc5a4bQ91ZP4 660 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Foxo4Q9WVH3 505 aa17.93■□□□□ 0.46
Trim11-203ENSMUST00000108810 Ltbp1Q8CG19 1712 aa17.92■□□□□ 0.46
Trim11-203ENSMUST00000108810 Cops6O88545 324 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms