RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 RestQ8VIG1 1082 aa17.75■□□□□ 0.43
Usp38-201ENSMUST00000042724 Catsper2A2ARP9 588 aa17.75■□□□□ 0.43
Usp38-201ENSMUST00000042724 Traf3ip1Q149C2 625 aa17.75■□□□□ 0.43
Usp38-201ENSMUST00000042724 Pdcl3Q8BVF2 240 aa17.75■□□□□ 0.43
Usp38-201ENSMUST00000042724 Znhit6Q3UFB2 460 aaKnown RBP17.74■□□□□ 0.43
Usp38-201ENSMUST00000042724 Eif4a1P60843 406 aaKnown RBP17.74■□□□□ 0.43
Usp38-201ENSMUST00000042724 Slx4ipQ9D7Y9 413 aa17.74■□□□□ 0.43
Usp38-201ENSMUST00000042724 Gas2l3Q3UWW6 683 aa17.74■□□□□ 0.43
Usp38-201ENSMUST00000042724 Dydc2Q9D3X8 139 aa17.74■□□□□ 0.43
Usp38-201ENSMUST00000042724 St5Q924W7 1134 aa17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Bloc1s2Q9CWG9 143 aa17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Ccdc178Q8CDV0 866 aa17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Qtrt2B8ZXI1 415 aa17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Lrrc43Q3V0L5 667 aa17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Ddx17Q501J6 650 aaKnown RBP17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Mrpl44Q9CY73 333 aaKnown RBP17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Nap1l2P51860 460 aa17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Gigyf1Q99MR1 1044 aaKnown RBP17.73■□□□□ 0.43
Usp38-201ENSMUST00000042724 Tm6sf1P58749 370 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Gm21985Q6P6P5 1106 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Vps37dQ810I0 261 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Igbp1bQ9QZ29 343 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Asic4Q7TNS7 539 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Prl3d3A0A0M6L0J6 224 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Ces1aE9PYP1 563 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Znf18Q810A1 556 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Nek11Q8C0Q4 628 aa17.72■□□□□ 0.43
Usp38-201ENSMUST00000042724 Kiaa1210E9Q0C6 1637 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Mcm3P25206 812 aaKnown RBP17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Znf692Q3U381 531 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Ttc14Q9CSP9 761 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Metap2O08663 478 aaKnown RBP17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 CalcaP70160 136 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Gm12185Q5NCB2 835 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Zbtb22Q9Z0G7 638 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Gm32742A0A1B0GT42 1604 aa17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Larp1Q6ZQ58 1072 aaKnown RBP17.71■□□□□ 0.43
Usp38-201ENSMUST00000042724 Samd1D3YXK1 519 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ppp1r3fQ9JIG4 799 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Nphp3Q7TNH6 1325 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cavin1O54724 392 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cops6O88545 324 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ccdc172Q810N9 267 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ccdc150Q8CDI7 1110 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cfap45Q9D9U9 551 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ccdc34Q3UI66 367 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Esco1Q69Z69 843 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Tceanc2Q8R2M0 207 aa17.7■□□□□ 0.42
Usp38-201ENSMUST00000042724 Adgrb3Q80ZF8 1522 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Rad23bP54728 416 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Jarid2Q62315 1234 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cnot6lQ8VEG6 555 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Lrrfip1Q3UZ39 729 aaKnown RBP17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Sde2Q8K1J5 448 aaKnown RBP17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 RtcbQ99LF4 505 aaKnown RBP17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Med14A2ABV5 1459 aaKnown RBP17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 A0A0U1RNP2 1173 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ube2hP62257 183 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 NmiO35309 314 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Q4VA45 678 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Slc35g1Q8BY79 368 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Zbtb43Q9DAI4 467 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Kcnn1Q9EQR3 537 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Kif24Q6NWW5 1356 aa17.69■□□□□ 0.42
Usp38-201ENSMUST00000042724 Knl1Q66JQ7 1612 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Mdm2P23804 489 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Snrpa1P57784 255 aaKnown RBP17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 MthfsQ9D110 203 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Eya2O08575 532 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cnnm2Q3TWN3 875 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cep152A2AUM9 1736 aaKnown RBP17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Setbp1Q9Z180 1582 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 4931400O07RikQ9D4M5 137 aa17.68■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ttc41Q692V3 1318 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Prl3d2F6R3P9 224 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Chl1P70232 1209 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ccdc96Q9CR92 584 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Kdm4aQ8BW72 1064 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Nap1l5Q9JJF0 156 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Stxbp4Q9WV89 557 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ampd3O08739 766 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Slc4a4O88343 1079 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 NefhP19246 1090 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Rcan3Q9JKK0 239 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ak2Q9WTP6 239 aa17.67■□□□□ 0.42
Usp38-201ENSMUST00000042724 Ifit2Q64112 472 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Kiaa0556Q8C753 1610 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Bag1Q60739 355 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Mns1Q61884 491 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Egfem1Q8C088 590 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 WtapQ9ER69 396 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Slu7Q8BHJ9 585 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Cdan1Q8CC12 1239 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Zbtb21E9Q444 1094 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Arhgef1Q61210 920 aaKnown RBP17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Mtmr3Q8K296 1196 aa17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Foxp4Q9DBY0 795 aaKnown RBP17.66■□□□□ 0.42
Usp38-201ENSMUST00000042724 Dennd3A2RT67 1274 aa17.65■□□□□ 0.42
Usp38-201ENSMUST00000042724 Stx8O88983 236 aa17.65■□□□□ 0.42
Usp38-201ENSMUST00000042724 MycnP03966 462 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 101.4 ms