RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Ssr1Q9CY50 286 aaKnown RBP13.74□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Nfe2l3Q9WTM4 660 aa13.74□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Kif1aP33173 1695 aa13.74□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Ube2oQ6ZPJ3 1288 aa13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Smarca5Q91ZW3 1051 aaKnown RBP13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Acsbg1Q99PU5 721 aa13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 PdcQ9QW08 244 aa13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Atp2b1G5E829 1220 aa13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 U2surpQ6NV83 1029 aaKnown RBP13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Cwc15Q9JHS9 229 aaKnown RBP13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Hmgn5Q9JL35 406 aa13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Zranb2Q9R020 330 aaKnown RBP13.73□□□□□ -0.21
Vamp1-201ENSMUST00000032487 EvcP57680 1005 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Smim5Q8BT42 78 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Bcl2l12Q9D3J3 255 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Mon2Q80TL7 1715 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Ddx19aQ61655 478 aaKnown RBP13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Adcy2Q80TL1 1090 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Fam13aQ8BGI4 693 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 DpydQ8CHR6 1025 aa13.72□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Btn2a2A4QPC6 514 aa13.71□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Cdc37l1Q9CZP7 335 aa13.71□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Elf2Q9JHC9 593 aa13.71□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Casz1Q9CWL2 1761 aa13.71□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Znf335A2A5K6 1337 aa13.71□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Atp7bQ64446 1462 aa13.71□□□□□ -0.21
Vamp1-201ENSMUST00000032487 Frmpd2A0A140LI67 1392 aa13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cfap58B2RW38 873 aa13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Tyro3P55144 880 aa13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cadps2Q8BYR5 1297 aa13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 KinQ8K339 391 aa13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Ddx54Q8K4L0 874 aaKnown RBP13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Zbtb22Q9Z0G7 638 aa13.71□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Zfp142G5E869 1843 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Triml2E9PW10 424 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Ranbp1P34022 203 aaKnown RBP13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Tm6sf1P58749 370 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Anapc15P60007 132 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Lrrc8aQ80WG5 810 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Wdr3Q8BHB4 942 aaKnown RBP13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Arid5bQ8BM75 1188 aaKnown RBP13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Ccdc7Q9D541 371 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 NagaQ9QWR8 415 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 MccE9PWI3 1003 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Elmsan1E9Q2I4 1089 aaKnown RBP13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Plcb3P51432 1234 aaKnown RBP13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 EappQ5BU09 281 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cyp46a1Q9WVK8 500 aa13.7□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cd22P35329 862 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Strn4P58404 760 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Trak2Q6P9N8 913 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Nup88Q8CEC0 753 aaKnown RBP13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Aldh1l2Q8K009 923 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Sh3bp5Q9Z131 463 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Fmnl2A2APV2 1086 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 FntaQ61239 377 aa13.69□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Atg4a-psA0A0G2JFS9 396 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Sema6bO54951 886 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Atg4aQ8C9S8 396 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Rab11fip3Q8CHD8 1047 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Gimap6Q8K349 305 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 MecomP14404 1042 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Nol8Q3UHX0 1147 aaKnown RBP13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Tpm4Q6IRU2 248 aa13.68□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Zfp804bA0A0G2JGH6 1343 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Wdr33Q8K4P0 1330 aaKnown RBP13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Gabpb2P81069 414 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Ttll12Q3UDE2 639 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Utp18Q5SSI6 552 aaKnown RBP13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Acbd5Q5XG73 508 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cnksr2Q80YA9 1032 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Gm21190A0A0G2JGJ6 266 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Trim55G3X8Y1 545 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Rnaseh1O70338 285 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 CalcaP70160 136 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 L1td1Q587J6 782 aaKnown RBP13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Dzip1Q8BMD2 852 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Zcchc17Q9ESX4 241 aaKnown RBP13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 DonsonQ9QXP4 560 aa13.67□□□□□ -0.22
Vamp1-201ENSMUST00000032487 MarsQ68FL6 902 aaKnown RBP13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Phf23Q8BSN5 401 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Stx6Q9JKK1 255 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Fbln2P37889 1221 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Arhgef1Q61210 920 aaKnown RBP13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cavin2Q63918 418 aaKnown RBP13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Npdc1Q64322 332 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Polr3gQ6NXY9 223 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Dnaaf2Q8BPI1 814 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Cep83Q9D5R3 692 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Lonp2Q9DBN5 852 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Mcm6P97311 821 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Pdzrn3Q69ZS0 1063 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Dennd6aQ8BH65 605 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 RestQ8VIG1 1082 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 GzmnQ920S1 248 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Saal1Q9D2C2 474 aa13.66□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Atp10bB1AWN4 1474 aa13.65□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Actn3O88990 900 aaKnown RBP13.65□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Ric3Q8BPM6 367 aa13.65□□□□□ -0.22
Vamp1-201ENSMUST00000032487 Q8VDP2 222 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms