RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	ECM21	P38167	1117 aa	Known RBP	4.11	□□□□□ -1.75
HAA1	YPR008W	ZRG8	P40021	1076 aa		4.11	□□□□□ -1.75
HAA1	YPR008W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
HAA1	YPR008W	PFD1	P46988	109 aa		4.11	□□□□□ -1.75
HAA1	YPR008W	CDA1	Q06702	301 aa		4.11	□□□□□ -1.75
HAA1	YPR008W	SSF2	Q12153	453 aa	Predicted RBP	4.11	□□□□□ -1.75
HAA1	YPR008W	SKI3	P17883	1432 aa	Known RBP	4.11	□□□□□ -1.75
HAA1	YPR008W	YBR184W	P38299	523 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	TMA10	Q06177	86 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	ADY3	Q07732	790 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	ENA1	P13587	1091 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	SRP101	P32916	621 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	ENA2	Q01896	1091 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	TDA5	Q06417	326 aa	Known RBP	4.1	□□□□□ -1.75
HAA1	YPR008W	ENA5	Q12691	1091 aa		4.1	□□□□□ -1.75
HAA1	YPR008W	MYO2	P19524	1574 aa	Known RBP	4.09	□□□□□ -1.75
HAA1	YPR008W	GRX1	P25373	110 aa	Known RBP	4.09	□□□□□ -1.75
HAA1	YPR008W	FUN30	P31380	1131 aa		4.09	□□□□□ -1.75
HAA1	YPR008W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	RIP-Chip
HAA1	YPR008W	YDR306C	Q06640	478 aa		4.09	□□□□□ -1.75
HAA1	YPR008W	HBS1	P32769	611 aa	Known RBP	4.09	□□□□□ -1.76
HAA1	YPR008W	YGR012W	P53206	393 aa		4.09	□□□□□ -1.76
HAA1	YPR008W	PBP1	P53297	722 aa	Known RBP	4.09	□□□□□ -1.76
HAA1	YPR008W	WHI4	Q07655	649 aa	Known RBP	4.09	□□□□□ -1.76
HAA1	YPR008W	YPK9	Q12697	1472 aa		4.08	□□□□□ -1.76
HAA1	YPR008W	TSL1	P38427	1098 aa	Known RBP	4.08	□□□□□ -1.76
HAA1	YPR008W	PLB1	P39105	664 aa		4.08	□□□□□ -1.76
HAA1	YPR008W	MET12	P46151	657 aa		4.08	□□□□□ -1.76
HAA1	YPR008W	MRP8	P35719	219 aa		4.07	□□□□□ -1.76
HAA1	YPR008W	POA1	P38218	177 aa		4.07	□□□□□ -1.76
HAA1	YPR008W	SNF7	P39929	240 aa	Known RBP	4.07	□□□□□ -1.76
HAA1	YPR008W	IRR1	P40541	1150 aa		4.07	□□□□□ -1.76
HAA1	YPR008W	PBY1	P38254	753 aa		4.07	□□□□□ -1.76
HAA1	YPR008W	CHA4	P43634	648 aa		4.07	□□□□□ -1.76
HAA1	YPR008W	GYP7	P48365	746 aa		4.07	□□□□□ -1.76
HAA1	YPR008W	MCM6	P53091	1017 aa	Known RBP	4.07	□□□□□ -1.76
HAA1	YPR008W	SRP1	Q02821	542 aa	Known RBP	4.07	□□□□□ -1.76
HAA1	YPR008W	BUL2	Q03758	920 aa	Known RBP	4.07	□□□□□ -1.76
HAA1	YPR008W	PHO23	P50947	330 aa		4.06	□□□□□ -1.76
HAA1	YPR008W	NOP12	Q08208	459 aa	Known RBP	4.06	□□□□□ -1.76
HAA1	YPR008W	HIS5	P07172	385 aa		4.06	□□□□□ -1.76
HAA1	YPR008W	SPE1	P08432	466 aa		4.06	□□□□□ -1.76
HAA1	YPR008W	YKE2	P52553	114 aa		4.06	□□□□□ -1.76
HAA1	YPR008W	FMP25	Q08023	583 aa		4.06	□□□□□ -1.76
HAA1	YPR008W	YER158C	P40095	573 aa		4.05	□□□□□ -1.76
HAA1	YPR008W	UBX5	Q06682	500 aa		4.05	□□□□□ -1.76
HAA1	YPR008W	KCS1	Q12494	1050 aa		4.05	□□□□□ -1.76
HAA1	YPR008W	POL1	P13382	1468 aa		4.05	□□□□□ -1.76
HAA1	YPR008W	SCC2	Q04002	1493 aa		4.05	□□□□□ -1.76
HAA1	YPR008W	PPH3	P32345	308 aa		4.04	□□□□□ -1.76
HAA1	YPR008W	AAR2	P32357	355 aa	Predicted RBP	4.04	□□□□□ -1.76
HAA1	YPR008W	KRI1	P42846	591 aa	Known RBP	4.04	□□□□□ -1.76
HAA1	YPR008W	MNN10	P50108	393 aa	Known RBP	4.04	□□□□□ -1.76
HAA1	YPR008W	WRS1	Q12109	432 aa	Known RBP	4.04	□□□□□ -1.76
HAA1	YPR008W	LAS17	Q12446	633 aa		4.04	□□□□□ -1.76
HAA1	YPR008W	HSF1	P10961	833 aa		4.04	□□□□□ -1.76
HAA1	YPR008W	RPL8B	P29453	256 aa	Known RBP	4.04	□□□□□ -1.76
HAA1	YPR008W	YRO2	P38079	344 aa		4.04	□□□□□ -1.76
HAA1	YPR008W	YBR284W	P38150	797 aa		4.04	□□□□□ -1.76
HAA1	YPR008W	SIT1	P39980	628 aa		4.04	□□□□□ -1.76
HAA1	YPR008W	ALR2	P43553	858 aa		4.03	□□□□□ -1.76
HAA1	YPR008W	SSL1	Q04673	461 aa	Predicted RBP	4.03	□□□□□ -1.76
HAA1	YPR008W	RPO31	P04051	1460 aa		4.03	□□□□□ -1.76
HAA1	YPR008W	STE11	P23561	717 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	TOK1	P40310	691 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	URM1	P40554	99 aa	Predicted RBP	4.02	□□□□□ -1.77
HAA1	YPR008W	NCS6	P53088	359 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	YPR196W	Q06595	470 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	YPR071W	Q12346	211 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	STU1	P38198	1513 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	TOP3	P13099	656 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	RAD4	P14736	754 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	HCM1	P25364	564 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	CDC48	P25694	835 aa	Known RBP	4.02	□□□□□ -1.77
HAA1	YPR008W	DCG1	P32460	244 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	YKR078W	P36158	585 aa	Known RBP	4.02	□□□□□ -1.77
HAA1	YPR008W	YBR238C	P38330	731 aa	Known RBP	4.02	□□□□□ -1.77
HAA1	YPR008W	CCC2	P38995	1004 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	EXG2	P52911	562 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	UTP8	P53276	713 aa	Known RBP	4.02	□□□□□ -1.77
HAA1	YPR008W	NTO1	Q12311	748 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	UFD4	P33202	1483 aa		4.02	□□□□□ -1.77
HAA1	YPR008W	PMA1	P05030	918 aa	Known RBP	4.01	□□□□□ -1.77
HAA1	YPR008W	RPD3	P32561	433 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	SLU7	Q02775	382 aa	Known RBP	4.01	□□□□□ -1.77
HAA1	YPR008W	HBN1	Q96VH4	193 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	ADE8	P04161	214 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	NOT3	P06102	836 aa	Known RBP	4.01	□□□□□ -1.77
HAA1	YPR008W	STE14	P32584	239 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	YHR020W	P38708	688 aa	Known RBP	4.01	□□□□□ -1.77
HAA1	YPR008W	SLI1	P53304	468 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	NAN1	Q02931	896 aa	Known RBP	4.01	□□□□□ -1.77
HAA1	YPR008W	EAF1	Q06337	982 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	UPC2	Q12151	913 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	NPC2	Q12408	173 aa		4.01	□□□□□ -1.77
HAA1	YPR008W	TUB2	P02557	457 aa	Known RBP	4	□□□□□ -1.77
HAA1	YPR008W	RAI1	P53063	387 aa	Known RBP	4	□□□□□ -1.77
HAA1	YPR008W	SUN4	P53616	420 aa		4	□□□□□ -1.77
HAA1	YPR008W	TOP2	P06786	1428 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms