RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SPE1P08432 466 aa5.92□□□□□ -1.46
SSO1YPL232W HMG2P12684 1045 aa5.92□□□□□ -1.46
SSO1YPL232W CDC48P25694 835 aaKnown RBP5.92□□□□□ -1.46
SSO1YPL232W CCT3P39077 534 aaKnown RBP5.92□□□□□ -1.46
SSO1YPL232W VID28P40547 921 aa5.92□□□□□ -1.46
SSO1YPL232W LSB6P42951 607 aa5.92□□□□□ -1.46
SSO1YPL232W LAM5P43560 674 aa5.92□□□□□ -1.46
SSO1YPL232W ZAP1P47043 880 aa5.92□□□□□ -1.46
SSO1YPL232W CNM67P53865 581 aaKnown RBP5.92□□□□□ -1.46
SSO1YPL232W LEE1Q02799 301 aaKnown RBP5.92□□□□□ -1.46
SSO1YPL232W YML053CQ04978 212 aa5.92□□□□□ -1.46
SSO1YPL232W COQ9Q05779 260 aa5.92□□□□□ -1.46
SSO1YPL232W NSE1Q07913 336 aa5.92□□□□□ -1.46
SSO1YPL232W MEX67Q99257 599 aaKnown RBP5.92□□□□□ -1.46
SSO1YPL232W RPS9AO13516 197 aaKnown RBP5.91□□□□□ -1.46
SSO1YPL232W SGF29P25554 259 aa5.91□□□□□ -1.46
SSO1YPL232W RAD27P26793 382 aa5.91□□□□□ -1.46
SSO1YPL232W AAP1P37898 856 aaKnown RBP5.91□□□□□ -1.46
SSO1YPL232W EAF5P39995 279 aa5.91□□□□□ -1.46
SSO1YPL232W EST2Q06163 884 aa5.91□□□□□ -1.46
SSO1YPL232W ADE4P04046 510 aaKnown RBP5.9□□□□□ -1.46
SSO1YPL232W GLN3P18494 730 aa5.9□□□□□ -1.46
SSO1YPL232W SRO9P25567 434 aaKnown RBP5.9□□□□□ -1.46
SSO1YPL232W IMP2'P32351 346 aa5.9□□□□□ -1.46
SSO1YPL232W TMT1P32643 299 aa5.9□□□□□ -1.46
SSO1YPL232W ECM32P32644 1121 aaKnown RBP5.9□□□□□ -1.46
SSO1YPL232W PGM1P33401 570 aaKnown RBP5.9□□□□□ -1.46
SSO1YPL232W ATH1P48016 1211 aa5.9□□□□□ -1.46
SSO1YPL232W YGR273CP53329 174 aa5.9□□□□□ -1.46
SSO1YPL232W ROD1Q02805 837 aa5.9□□□□□ -1.46
SSO1YPL232W YDR341CQ05506 607 aaKnown RBP5.9□□□□□ -1.46
SSO1YPL232W SMC5Q08204 1093 aa5.9□□□□□ -1.46
SSO1YPL232W PKH2Q12236 1081 aaKnown RBP5.9□□□□□ -1.46
SSO1YPL232W RPS14AP06367 137 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W HOM2P13663 365 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W STI1P15705 589 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SSO1YPL232W HCA4P20448 770 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W MAK11P20484 414 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W RSA4P25382 515 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W PEP3P27801 918 aa5.89□□□□□ -1.47
SSO1YPL232W PEX2P32800 271 aa5.89□□□□□ -1.47
SSO1YPL232W RPT1P33299 467 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W DCW1P36091 449 aa5.89□□□□□ -1.47
SSO1YPL232W RXT2P38255 430 aa5.89□□□□□ -1.47
SSO1YPL232W SAP30P38429 201 aa5.89□□□□□ -1.47
SSO1YPL232W SFB3P38810 929 aa5.89□□□□□ -1.47
SSO1YPL232W RPS14BP39516 138 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W FIS1P40515 155 aa5.89□□□□□ -1.47
SSO1YPL232W DAN4P47179 1161 aa5.89□□□□□ -1.47
SSO1YPL232W FAA4P47912 694 aaKnown RBP5.89□□□□□ -1.47
SSO1YPL232W ENV11P53246 860 aa5.89□□□□□ -1.47
SSO1YPL232W SFB2P53953 876 aa5.89□□□□□ -1.47
SSO1YPL232W NSE5Q03718 556 aa5.89□□□□□ -1.47
SSO1YPL232W AIM33Q04516 312 aa5.89□□□□□ -1.47
SSO1YPL232W YML083CQ04526 418 aa5.89□□□□□ -1.47
SSO1YPL232W PLP2Q12017 286 aa5.89□□□□□ -1.47
SSO1YPL232W MET6P05694 767 aaKnown RBP5.88□□□□□ -1.47
SSO1YPL232W ATP1P07251 545 aaKnown RBP5.88□□□□□ -1.47
SSO1YPL232W HMT1P38074 348 aa5.88□□□□□ -1.47
SSO1YPL232W CIC1P38779 376 aaKnown RBP5.88□□□□□ -1.47
SSO1YPL232W LSB3P43603 459 aaKnown RBP5.88□□□□□ -1.47
SSO1YPL232W TAM41P53230 385 aa5.88□□□□□ -1.47
SSO1YPL232W YDL129WQ07555 291 aa5.88□□□□□ -1.47
SSO1YPL232W ESC8Q08119 714 aa5.88□□□□□ -1.47
SSO1YPL232W ILV1P00927 576 aaKnown RBP5.87□□□□□ -1.47
SSO1YPL232W COX4P04037 155 aa5.87□□□□□ -1.47
SSO1YPL232W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SSO1YPL232W HAP2P06774 265 aa5.87□□□□□ -1.47
SSO1YPL232W CLN3P13365 580 aa5.87□□□□□ -1.47
SSO1YPL232W PGS1P25578 521 aa5.87□□□□□ -1.47
SSO1YPL232W RAD54P32863 898 aa5.87□□□□□ -1.47
SSO1YPL232W HEL1P36113 551 aa5.87□□□□□ -1.47
SSO1YPL232W NMD3P38861 518 aaKnown RBP5.87□□□□□ -1.47
SSO1YPL232W FMO1P38866 432 aa5.87□□□□□ -1.47
SSO1YPL232W GAA1P39012 614 aa5.87□□□□□ -1.47
SSO1YPL232W BRE2P43132 505 aa5.87□□□□□ -1.47
SSO1YPL232W BFA1P47113 574 aa5.87□□□□□ -1.47
SSO1YPL232W ISM1P48526 1002 aa5.87□□□□□ -1.47
SSO1YPL232W NUT1P53114 1132 aa5.87□□□□□ -1.47
SSO1YPL232W TPO2P53283 614 aa5.87□□□□□ -1.47
SSO1YPL232W DIP5P53388 608 aa5.87□□□□□ -1.47
SSO1YPL232W BNI5P53890 448 aaKnown RBP5.87□□□□□ -1.47
SSO1YPL232W MFM1Q02783 413 aa5.87□□□□□ -1.47
SSO1YPL232W YHM2Q04013 314 aa5.87□□□□□ -1.47
SSO1YPL232W NKP2Q06162 153 aa5.87□□□□□ -1.47
SSO1YPL232W RAD50P12753 1312 aa5.87□□□□□ -1.47
SSO1YPL232W FUS1P11710 512 aa5.86□□□□□ -1.47
SSO1YPL232W SUP45P12385 437 aaKnown RBP5.86□□□□□ -1.47
SSO1YPL232W MCM3P24279 971 aaKnown RBP5.86□□□□□ -1.47
SSO1YPL232W PRP22P24384 1145 aaKnown RBP5.86□□□□□ -1.47
SSO1YPL232W PEX34P25584 144 aa5.86□□□□□ -1.47
SSO1YPL232W VPH1P32563 840 aaKnown RBP5.86□□□□□ -1.47
SSO1YPL232W SAS3P34218 831 aa5.86□□□□□ -1.47
SSO1YPL232W PCM1P38628 557 aaKnown RBP5.86□□□□□ -1.47
SSO1YPL232W MNP1P53163 194 aaPredicted RBP5.86□□□□□ -1.47
SSO1YPL232W YGR130CP53278 816 aa5.86□□□□□ -1.47
SSO1YPL232W RLF2Q12495 606 aa5.86□□□□□ -1.47
SSO1YPL232W PGA3Q12746 312 aaKnown RBP5.86□□□□□ -1.47
SSO1YPL232W MAS1P10507 462 aa5.85□□□□□ -1.47
SSO1YPL232W MRF1P30775 413 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms