RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	PGK1	P00560	416 aa	Known RBP	10.37	□□□□□ -0.75
DBP1	YPL119C	PRP22	P24384	1145 aa	Known RBP	10.37	□□□□□ -0.75
DBP1	YPL119C	YEL043W	P32618	956 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	OCT1	P35999	772 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	PNT1	P38969	423 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	MMM1	P41800	426 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	SMC3	P47037	1230 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	NGL3	Q03210	505 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	PHM6	Q05637	104 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	SPH1	Q06160	661 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	UBX5	Q06682	500 aa		10.37	□□□□□ -0.75
DBP1	YPL119C	CCT4	P39078	528 aa	Known RBP	10.36	□□□□□ -0.75
DBP1	YPL119C	BUD16	P39988	312 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	FAL1	Q12099	399 aa	Known RBP	10.36	□□□□□ -0.75
DBP1	YPL119C	SWI6	P09959	803 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	CKI1	P20485	582 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	YDJ1	P25491	409 aa	Known RBP	10.36	□□□□□ -0.75
DBP1	YPL119C	PAP1	P29468	568 aa	Known RBP	10.36	□□□□□ -0.75
DBP1	YPL119C	KTR2	P33550	425 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	RRP1	P35178	278 aa	Predicted RBP	10.36	□□□□□ -0.75
DBP1	YPL119C	KIC1	P38692	1080 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	VID30	P53076	958 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	MAL13	P53338	473 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	NCS2	P53923	493 aa	Predicted RBP	10.36	□□□□□ -0.75
DBP1	YPL119C	ARK1	P53974	638 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	ATG23	Q06671	453 aa		10.36	□□□□□ -0.75
DBP1	YPL119C	PCK1	P10963	549 aa		10.35	□□□□□ -0.75
DBP1	YPL119C	CDC48	P25694	835 aa	Known RBP	10.35	□□□□□ -0.75
DBP1	YPL119C	UBP13	P38187	747 aa		10.35	□□□□□ -0.75
DBP1	YPL119C	MLH2	Q07980	695 aa		10.35	□□□□□ -0.75
DBP1	YPL119C	NCR1	Q12200	1170 aa		10.35	□□□□□ -0.75
DBP1	YPL119C	OSH2	Q12451	1283 aa		10.35	□□□□□ -0.75
DBP1	YPL119C	YKL068W-A	Q3E826	78 aa		10.35	□□□□□ -0.75
DBP1	YPL119C	CLB5	P30283	435 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	MCR1	P36060	302 aa	Known RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	BYE1	P36106	594 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	SET5	P38890	526 aa	Known RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	FIS1	P40515	155 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	HUL5	P53119	910 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	PTA1	Q01329	785 aa	Predicted RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	CHS2	P14180	963 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	RPO26	P20435	155 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	DBP5	P20449	482 aa	Known RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	PER1	P25625	357 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	ERC1	P38767	581 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	CIN4	P39110	191 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	PEA2	P40091	420 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	ZPR1	P53303	486 aa	Known RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	YMR114C	Q04471	368 aa	Known RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	UTP14	Q04500	899 aa	Known RBP	10.34	□□□□□ -0.75
DBP1	YPL119C	GUD1	Q07729	489 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	DAS2	Q12084	232 aa		10.34	□□□□□ -0.75
DBP1	YPL119C	UTR4	P32626	227 aa		10.33	□□□□□ -0.76
DBP1	YPL119C	ATG19	P35193	415 aa		10.33	□□□□□ -0.76
DBP1	YPL119C	VAB2	P40003	282 aa		10.33	□□□□□ -0.76
DBP1	YPL119C	YLR297W	Q05899	129 aa		10.33	□□□□□ -0.76
DBP1	YPL119C	SIL1	Q08199	421 aa		10.33	□□□□□ -0.76
DBP1	YPL119C	PHO8	P11491	566 aa		10.32	□□□□□ -0.76
DBP1	YPL119C	HXT1	P32465	570 aa		10.32	□□□□□ -0.76
DBP1	YPL119C	MCD4	P36051	919 aa		10.32	□□□□□ -0.76
DBP1	YPL119C	CWC15	Q03772	175 aa	Known RBP	10.32	□□□□□ -0.76
DBP1	YPL119C	UTP13	Q05946	817 aa	Known RBP	10.32	□□□□□ -0.76
DBP1	YPL119C	GFA1	P14742	717 aa	Known RBP	10.32	□□□□□ -0.76
DBP1	YPL119C	SAP1	P39955	897 aa	Known RBP	10.32	□□□□□ -0.76
DBP1	YPL119C	LCB2	P40970	561 aa		10.32	□□□□□ -0.76
DBP1	YPL119C	COS5	P47187	383 aa		10.32	□□□□□ -0.76
DBP1	YPL119C	CSR1	Q06705	408 aa	Known RBP	10.32	□□□□□ -0.76
DBP1	YPL119C	TY1B-A	O13527	1196 aa	Known RBP	10.31	□□□□□ -0.76
DBP1	YPL119C	VMA2	P16140	517 aa	Known RBP	10.31	□□□□□ -0.76
DBP1	YPL119C	UBP15	P50101	1230 aa		10.31	□□□□□ -0.76
DBP1	YPL119C	TIM8	P57744	87 aa		10.31	□□□□□ -0.76
DBP1	YPL119C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.31	□□□□□ -0.76	not detected
DBP1	YPL119C	NOC3	Q07896	663 aa	Predicted RBP	10.31	□□□□□ -0.76
DBP1	YPL119C	TCP1	P12612	559 aa	Known RBP	10.3	□□□□□ -0.76
DBP1	YPL119C	CWC22	P53333	577 aa	Known RBP	10.3	□□□□□ -0.76
DBP1	YPL119C	TRP2	P00899	507 aa	Known RBP	10.3	□□□□□ -0.76
DBP1	YPL119C	YSC83	P32792	385 aa		10.3	□□□□□ -0.76
DBP1	YPL119C	YKR018C	P36114	725 aa		10.3	□□□□□ -0.76
DBP1	YPL119C	REG2	P38232	338 aa		10.3	□□□□□ -0.76
DBP1	YPL119C	AVT1	P47082	602 aa		10.3	□□□□□ -0.76
DBP1	YPL119C	YML082W	Q04533	649 aa	Known RBP	10.3	□□□□□ -0.76
DBP1	YPL119C	TSR1	Q07381	788 aa	Known RBP	10.3	□□□□□ -0.76
DBP1	YPL119C	ISA1	Q07821	250 aa	Predicted RBP	10.3	□□□□□ -0.76
DBP1	YPL119C	ERG11	P10614	530 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	CNS1	P33313	385 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	SDS3	P40505	327 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	VPS53	P47061	822 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	DIG1	Q03063	452 aa	Known RBP	10.29	□□□□□ -0.76
DBP1	YPL119C	PUS5	Q06244	254 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	CUR1	Q06469	252 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	SLX4	Q12098	748 aa		10.29	□□□□□ -0.76
DBP1	YPL119C	SPT2	P06843	333 aa	Predicted RBP	10.28	□□□□□ -0.76
DBP1	YPL119C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.28	□□□□□ -0.76	not detected
DBP1	YPL119C	NAM7	P30771	971 aa	Known RBP	10.28	□□□□□ -0.76
DBP1	YPL119C	BTN2	P53286	410 aa		10.28	□□□□□ -0.76
DBP1	YPL119C	POB3	Q04636	552 aa	Known RBP	10.28	□□□□□ -0.76
DBP1	YPL119C	RLP24	Q07915	199 aa	Known RBP	10.28	□□□□□ -0.76
DBP1	YPL119C	TKL1	P23254	680 aa	Known RBP	10.27	□□□□□ -0.76
DBP1	YPL119C	HXT8	P40886	569 aa		10.27	□□□□□ -0.76
DBP1	YPL119C	FIG4	P42837	879 aa		10.27	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms