RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	MNN2	P38069	597 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	YHL050C	P38721	697 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	YHR219W	P38900	624 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	TRF5	P48561	642 aa	Known RBP	4.79	□□□□□ -1.64
GDE1	YPL110C	MIG2	P53035	382 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	SPO1	P53541	631 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	INA17	Q02888	182 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	YDR090C	Q03193	310 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	YEL077C	Q3E7X8	1277 aa		4.79	□□□□□ -1.64
GDE1	YPL110C	TAL1	P15019	335 aa	Known RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	VAN1	P23642	535 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	HSP30	P25619	332 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	COQ8	P27697	501 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	VPH1	P32563	840 aa	Known RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	BAP2	P38084	609 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
GDE1	YPL110C	YAP1801	P38856	637 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	RTT105	P40063	208 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	RTT106	P40161	455 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	GCD10	P41814	478 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	CTK3	P46963	296 aa	Predicted RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	JJJ2	P46997	583 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	CWH41	P53008	833 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	YGR266W	P53326	701 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	GYL1	Q04322	720 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	LCB5	Q06147	687 aa	Known RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
GDE1	YPL110C	MNL2	Q12205	849 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	YML002W	P0CF17	737 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	CYC8	P14922	966 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	AAD3	P25612	363 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	ATP3	P38077	311 aa	Known RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	MBP1	P39678	833 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	MMR1	Q06324	491 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	ATP16	Q12165	160 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	PGI1	P12709	554 aa	Known RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	KRR1	P25586	316 aa	Predicted RBP	4.78	□□□□□ -1.64
GDE1	YPL110C	RFC5	P38251	354 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	NUP85	P46673	744 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	MDV1	P47025	714 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	RIM21	P48565	533 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	SSL2	Q00578	843 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	FAR8	Q05040	523 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	YOR378W	Q08902	515 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	ATG9	Q12142	997 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	GPR1	Q12361	961 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	DPH6	Q12429	685 aa		4.78	□□□□□ -1.64
GDE1	YPL110C	PIF1	P07271	859 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	RPB2	P08518	1224 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	RSR1	P13856	272 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	ACE2	P21192	770 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	HEL1	P36113	551 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	YHR020W	P38708	688 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	DSS1	P39112	969 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	YER156C	P40093	338 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	YJL070C	P40361	888 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	RRT14	P40470	206 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	ATH1	P48016	1211 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	UBP15	P50101	1230 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	UBA2	P52488	636 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	SDA1	P53313	767 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	VPS16	Q03308	798 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	YOL036W	Q08206	761 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	RTT10	Q08924	1013 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	MED4	Q12343	284 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	FOB1	O13329	566 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	NMT1	P14743	455 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	VPH2	P32341	215 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	YEL043W	P32618	956 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	ECM4	P36156	370 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	ALG14	P38242	237 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	POP2	P39008	433 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	MPS2	P53159	387 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	PEX8	P53248	589 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	GIM3	P53900	129 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	CRN1	Q06440	651 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	KRS1	P15180	591 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	SLA2	P33338	968 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	DUR3	P33413	735 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	TGL4	P36165	910 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	JNM1	P36224	373 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	RRM3	P38766	723 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	HXT6	P39003	570 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	HXT7	P39004	570 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
GDE1	YPL110C	CIR1	P42940	261 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	ALB1	P47019	175 aa	Predicted RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	SRB7	P47822	140 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	NCS2	P53923	493 aa	Predicted RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	EMI2	Q04409	500 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	BDF2	Q07442	638 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	RVB2	Q12464	471 aa	Known RBP	4.77	□□□□□ -1.65
GDE1	YPL110C	SMC6	Q12749	1114 aa		4.77	□□□□□ -1.65
GDE1	YPL110C	FUS1	P11710	512 aa		4.76	□□□□□ -1.65
GDE1	YPL110C	AFR1	P33304	620 aa		4.76	□□□□□ -1.65
GDE1	YPL110C	FCY21	P40039	528 aa		4.76	□□□□□ -1.65
GDE1	YPL110C	RSM25	P40496	264 aa		4.76	□□□□□ -1.65
GDE1	YPL110C	UBP2	Q01476	1272 aa		4.76	□□□□□ -1.65
GDE1	YPL110C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
GDE1	YPL110C	RAT1	Q02792	1006 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms