RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C MNN2P38069 597 aa4.79□□□□□ -1.64
GDE1YPL110C YHL050CP38721 697 aa4.79□□□□□ -1.64
GDE1YPL110C YHR219WP38900 624 aa4.79□□□□□ -1.64
GDE1YPL110C TRF5P48561 642 aaKnown RBP4.79□□□□□ -1.64
GDE1YPL110C MIG2P53035 382 aa4.79□□□□□ -1.64
GDE1YPL110C SPO1P53541 631 aa4.79□□□□□ -1.64
GDE1YPL110C INA17Q02888 182 aa4.79□□□□□ -1.64
GDE1YPL110C YDR090CQ03193 310 aa4.79□□□□□ -1.64
GDE1YPL110C YEL077CQ3E7X8 1277 aa4.79□□□□□ -1.64
GDE1YPL110C TAL1P15019 335 aaKnown RBP4.78□□□□□ -1.64
GDE1YPL110C VAN1P23642 535 aa4.78□□□□□ -1.64
GDE1YPL110C HSP30P25619 332 aa4.78□□□□□ -1.64
GDE1YPL110C COQ8P27697 501 aa4.78□□□□□ -1.64
GDE1YPL110C VPH1P32563 840 aaKnown RBP4.78□□□□□ -1.64
GDE1YPL110C BAP2P38084 609 aa4.78□□□□□ -1.64
GDE1YPL110C PBP2P38151 413 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
GDE1YPL110C YAP1801P38856 637 aa4.78□□□□□ -1.64
GDE1YPL110C RTT105P40063 208 aa4.78□□□□□ -1.64
GDE1YPL110C RTT106P40161 455 aa4.78□□□□□ -1.64
GDE1YPL110C GCD10P41814 478 aa4.78□□□□□ -1.64
GDE1YPL110C CTK3P46963 296 aaPredicted RBP4.78□□□□□ -1.64
GDE1YPL110C JJJ2P46997 583 aa4.78□□□□□ -1.64
GDE1YPL110C CWH41P53008 833 aa4.78□□□□□ -1.64
GDE1YPL110C YGR266WP53326 701 aa4.78□□□□□ -1.64
GDE1YPL110C GYL1Q04322 720 aa4.78□□□□□ -1.64
GDE1YPL110C LCB5Q06147 687 aaKnown RBP4.78□□□□□ -1.64
GDE1YPL110C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
GDE1YPL110C MNL2Q12205 849 aa4.78□□□□□ -1.64
GDE1YPL110C YML002WP0CF17 737 aa4.78□□□□□ -1.64
GDE1YPL110C CYC8P14922 966 aa4.78□□□□□ -1.64
GDE1YPL110C AAD3P25612 363 aa4.78□□□□□ -1.64
GDE1YPL110C ATP3P38077 311 aaKnown RBP4.78□□□□□ -1.64
GDE1YPL110C MBP1P39678 833 aa4.78□□□□□ -1.64
GDE1YPL110C MMR1Q06324 491 aa4.78□□□□□ -1.64
GDE1YPL110C ATP16Q12165 160 aa4.78□□□□□ -1.64
GDE1YPL110C PGI1P12709 554 aaKnown RBP4.78□□□□□ -1.64
GDE1YPL110C KRR1P25586 316 aaPredicted RBP4.78□□□□□ -1.64
GDE1YPL110C RFC5P38251 354 aa4.78□□□□□ -1.64
GDE1YPL110C NUP85P46673 744 aa4.78□□□□□ -1.64
GDE1YPL110C MDV1P47025 714 aa4.78□□□□□ -1.64
GDE1YPL110C RIM21P48565 533 aa4.78□□□□□ -1.64
GDE1YPL110C SSL2Q00578 843 aa4.78□□□□□ -1.64
GDE1YPL110C FAR8Q05040 523 aa4.78□□□□□ -1.64
GDE1YPL110C YOR378WQ08902 515 aa4.78□□□□□ -1.64
GDE1YPL110C ATG9Q12142 997 aa4.78□□□□□ -1.64
GDE1YPL110C GPR1Q12361 961 aa4.78□□□□□ -1.64
GDE1YPL110C DPH6Q12429 685 aa4.78□□□□□ -1.64
GDE1YPL110C PIF1P07271 859 aa4.77□□□□□ -1.65
GDE1YPL110C RPB2P08518 1224 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C RSR1P13856 272 aa4.77□□□□□ -1.65
GDE1YPL110C ACE2P21192 770 aa4.77□□□□□ -1.65
GDE1YPL110C HEL1P36113 551 aa4.77□□□□□ -1.65
GDE1YPL110C YHR020WP38708 688 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C DSS1P39112 969 aa4.77□□□□□ -1.65
GDE1YPL110C YER156CP40093 338 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C YJL070CP40361 888 aa4.77□□□□□ -1.65
GDE1YPL110C RRT14P40470 206 aa4.77□□□□□ -1.65
GDE1YPL110C ATH1P48016 1211 aa4.77□□□□□ -1.65
GDE1YPL110C UBP15P50101 1230 aa4.77□□□□□ -1.65
GDE1YPL110C UBA2P52488 636 aa4.77□□□□□ -1.65
GDE1YPL110C SDA1P53313 767 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C VPS16Q03308 798 aa4.77□□□□□ -1.65
GDE1YPL110C YOL036WQ08206 761 aa4.77□□□□□ -1.65
GDE1YPL110C RTT10Q08924 1013 aa4.77□□□□□ -1.65
GDE1YPL110C MED4Q12343 284 aa4.77□□□□□ -1.65
GDE1YPL110C FOB1O13329 566 aa4.77□□□□□ -1.65
GDE1YPL110C NMT1P14743 455 aa4.77□□□□□ -1.65
GDE1YPL110C VPH2P32341 215 aa4.77□□□□□ -1.65
GDE1YPL110C YEL043WP32618 956 aa4.77□□□□□ -1.65
GDE1YPL110C ECM4P36156 370 aa4.77□□□□□ -1.65
GDE1YPL110C ALG14P38242 237 aa4.77□□□□□ -1.65
GDE1YPL110C POP2P39008 433 aa4.77□□□□□ -1.65
GDE1YPL110C MPS2P53159 387 aa4.77□□□□□ -1.65
GDE1YPL110C PEX8P53248 589 aa4.77□□□□□ -1.65
GDE1YPL110C GIM3P53900 129 aa4.77□□□□□ -1.65
GDE1YPL110C CRN1Q06440 651 aa4.77□□□□□ -1.65
GDE1YPL110C KRS1P15180 591 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C SLA2P33338 968 aa4.77□□□□□ -1.65
GDE1YPL110C DUR3P33413 735 aa4.77□□□□□ -1.65
GDE1YPL110C TGL4P36165 910 aa4.77□□□□□ -1.65
GDE1YPL110C JNM1P36224 373 aa4.77□□□□□ -1.65
GDE1YPL110C RRM3P38766 723 aa4.77□□□□□ -1.65
GDE1YPL110C HXT6P39003 570 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C HXT7P39004 570 aa4.77□□□□□ -1.65
GDE1YPL110C MPT5P39016 859 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
GDE1YPL110C CIR1P42940 261 aa4.77□□□□□ -1.65
GDE1YPL110C ALB1P47019 175 aaPredicted RBP4.77□□□□□ -1.65
GDE1YPL110C SRB7P47822 140 aa4.77□□□□□ -1.65
GDE1YPL110C NCS2P53923 493 aaPredicted RBP4.77□□□□□ -1.65
GDE1YPL110C EMI2Q04409 500 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C BDF2Q07442 638 aa4.77□□□□□ -1.65
GDE1YPL110C RVB2Q12464 471 aaKnown RBP4.77□□□□□ -1.65
GDE1YPL110C SMC6Q12749 1114 aa4.77□□□□□ -1.65
GDE1YPL110C FUS1P11710 512 aa4.76□□□□□ -1.65
GDE1YPL110C AFR1P33304 620 aa4.76□□□□□ -1.65
GDE1YPL110C FCY21P40039 528 aa4.76□□□□□ -1.65
GDE1YPL110C RSM25P40496 264 aa4.76□□□□□ -1.65
GDE1YPL110C UBP2Q01476 1272 aa4.76□□□□□ -1.65
GDE1YPL110C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
GDE1YPL110C RAT1Q02792 1006 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms