RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W RRD1P40454 393 aaKnown RBP4.03□□□□□ -1.76
MSD1YPL104W SQS1P53866 767 aaKnown RBP4.03□□□□□ -1.76
MSD1YPL104W MDM1Q01846 1127 aa4.03□□□□□ -1.76
MSD1YPL104W SPP1Q03012 353 aa4.03□□□□□ -1.76
MSD1YPL104W MMR1Q06324 491 aa4.03□□□□□ -1.76
MSD1YPL104W RGA2Q06407 1009 aa4.03□□□□□ -1.76
MSD1YPL104W UBX5Q06682 500 aa4.03□□□□□ -1.76
MSD1YPL104W YOR296WQ08748 1289 aa4.03□□□□□ -1.76
MSD1YPL104W OXR1Q08952 273 aa4.03□□□□□ -1.76
MSD1YPL104W PTC5Q12511 572 aa4.03□□□□□ -1.76
MSD1YPL104W HIS4P00815 799 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W PRT1P06103 763 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W HPR1P17629 752 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W GSY2P27472 705 aa4.02□□□□□ -1.77
MSD1YPL104W YBL028CP38202 106 aa4.02□□□□□ -1.77
MSD1YPL104W VPS45P38932 577 aa4.02□□□□□ -1.77
MSD1YPL104W CCT3P39077 534 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W FET4P40988 552 aa4.02□□□□□ -1.77
MSD1YPL104W SAM37P50110 327 aa4.02□□□□□ -1.77
MSD1YPL104W RTC4P53850 401 aa4.02□□□□□ -1.77
MSD1YPL104W YNL011CP53980 444 aa4.02□□□□□ -1.77
MSD1YPL104W VIP1Q06685 1146 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W THR4P16120 514 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W RAD53P22216 821 aa4.02□□□□□ -1.77
MSD1YPL104W UTR2P32623 467 aa4.02□□□□□ -1.77
MSD1YPL104W SEC61P32915 480 aa4.02□□□□□ -1.77
MSD1YPL104W TPM2P40414 161 aa4.02□□□□□ -1.77
MSD1YPL104W YGR153WP48238 217 aa4.02□□□□□ -1.77
MSD1YPL104W RET3P53600 189 aa4.02□□□□□ -1.77
MSD1YPL104W BNI5P53890 448 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W CDC55Q00362 526 aa4.02□□□□□ -1.77
MSD1YPL104W POB3Q04636 552 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W EIS1Q05050 843 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W SMD2Q06217 110 aaKnown RBP4.02□□□□□ -1.77
MSD1YPL104W LAP2Q10740 671 aa4.02□□□□□ -1.77
MSD1YPL104W TUB2P02557 457 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W DAT1P13483 248 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W SAM2P19358 384 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W SAC6P32599 642 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W KTR2P33550 425 aa4.01□□□□□ -1.77
MSD1YPL104W MNR2P35724 969 aa4.01□□□□□ -1.77
MSD1YPL104W EBP2P36049 427 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W KEL1P38853 1164 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W STT3P39007 718 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W NOC2P39744 710 aaKnown RBP4.01□□□□□ -1.77
MSD1YPL104W LYS14P40971 790 aa4.01□□□□□ -1.77
MSD1YPL104W YGR117CP53270 476 aa4.01□□□□□ -1.77
MSD1YPL104W DSE4P53753 1117 aa4.01□□□□□ -1.77
MSD1YPL104W YDR344CQ05510 147 aa4.01□□□□□ -1.77
MSD1YPL104W YLR278CQ05854 1341 aa4.01□□□□□ -1.77
MSD1YPL104W CBP1P07252 654 aa4□□□□□ -1.77
MSD1YPL104W RPL8AP17076 256 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W CDC15P27636 974 aa4□□□□□ -1.77
MSD1YPL104W SPT16P32558 1035 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W TIF4631P39935 952 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W NIT1P40447 199 aa4□□□□□ -1.77
MSD1YPL104W TFG2P41896 400 aaPredicted RBP4□□□□□ -1.77
MSD1YPL104W ASE1P50275 885 aa4□□□□□ -1.77
MSD1YPL104W HUL5P53119 910 aa4□□□□□ -1.77
MSD1YPL104W LSB1P53281 241 aa4□□□□□ -1.77
MSD1YPL104W WAR1Q03631 944 aa4□□□□□ -1.77
MSD1YPL104W HCR1Q05775 265 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W YDL129WQ07555 291 aa4□□□□□ -1.77
MSD1YPL104W LDB19Q12502 818 aa4□□□□□ -1.77
MSD1YPL104W THS1P04801 734 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W PRI2P20457 528 aa4□□□□□ -1.77
MSD1YPL104W KIP2P28743 706 aa4□□□□□ -1.77
MSD1YPL104W HIR1P32479 840 aa4□□□□□ -1.77
MSD1YPL104W FAA3P39002 694 aa4□□□□□ -1.77
MSD1YPL104W CIT3P43635 486 aa4□□□□□ -1.77
MSD1YPL104W ARH1P48360 493 aa4□□□□□ -1.77
MSD1YPL104W SDA1P53313 767 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W CSM3Q04659 317 aa4□□□□□ -1.77
MSD1YPL104W GFD1Q04839 188 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W NOC3Q07896 663 aaPredicted RBP4□□□□□ -1.77
MSD1YPL104W PSR2Q07949 397 aa4□□□□□ -1.77
MSD1YPL104W SLK19Q08581 821 aaKnown RBP4□□□□□ -1.77
MSD1YPL104W YPR015CQ12531 247 aa4□□□□□ -1.77
MSD1YPL104W TUF1P02992 437 aaKnown RBP3.99□□□□□ -1.77
MSD1YPL104W MRPL33P20084 86 aa3.99□□□□□ -1.77
MSD1YPL104W SRO9P25567 434 aaKnown RBP3.99□□□□□ -1.77
MSD1YPL104W ADE17P38009 592 aaKnown RBP3.99□□□□□ -1.77
MSD1YPL104W PSY4P38193 441 aa3.99□□□□□ -1.77
MSD1YPL104W YHL008CP38750 627 aa3.99□□□□□ -1.77
MSD1YPL104W MNN1P39106 762 aa3.99□□□□□ -1.77
MSD1YPL104W UBA2P52488 636 aa3.99□□□□□ -1.77
MSD1YPL104W ESC2Q06340 456 aa3.99□□□□□ -1.77
MSD1YPL104W SUE1Q06524 206 aa3.99□□□□□ -1.77
MSD1YPL104W UTP4Q06679 776 aaKnown RBP3.99□□□□□ -1.77
MSD1YPL104W AFT2Q08957 416 aa3.99□□□□□ -1.77
MSD1YPL104W SSB1P11484 613 aaKnown RBP3.98□□□□□ -1.77
MSD1YPL104W GSY1P23337 708 aa3.98□□□□□ -1.77
MSD1YPL104W PWP2P25635 923 aaKnown RBP3.98□□□□□ -1.77
MSD1YPL104W MNN4P36044 1178 aa3.98□□□□□ -1.77
MSD1YPL104W TBS1P38114 1094 aa3.98□□□□□ -1.77
MSD1YPL104W HXT5P38695 592 aa3.98□□□□□ -1.77
MSD1YPL104W GAA1P39012 614 aa3.98□□□□□ -1.77
MSD1YPL104W ACA1P39970 489 aa3.98□□□□□ -1.77
MSD1YPL104W SSB2P40150 613 aaKnown RBP3.98□□□□□ -1.77
MSD1YPL104W FAA4P47912 694 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms