RNA–Protein interactions for RNA: YOR357C

SNX3, Transcript of Sorting nexin for late-Golgi enzymes, yeastyeast

Gene SNX3, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX3YOR357C KIC1P38692 1080 aa9.26□□□□□ -0.93
SNX3YOR357C SGM1P47166 707 aa9.26□□□□□ -0.93
SNX3YOR357C CWC22P53333 577 aaKnown RBP9.26□□□□□ -0.93
SNX3YOR357C RNT1Q02555 471 aa9.26□□□□□ -0.93
SNX3YOR357C TRM44Q02648 567 aaKnown RBP9.26□□□□□ -0.93
SNX3YOR357C GIR2Q03768 265 aaPredicted RBP9.26□□□□□ -0.93
SNX3YOR357C RUD3Q12234 484 aaKnown RBP9.26□□□□□ -0.93
SNX3YOR357C SRD1P09007 221 aa9.25□□□□□ -0.93
SNX3YOR357C PCK1P10963 549 aa9.25□□□□□ -0.93
SNX3YOR357C GFA1P14742 717 aaKnown RBP9.25□□□□□ -0.93
SNX3YOR357C CLB1P24868 471 aa9.25□□□□□ -0.93
SNX3YOR357C ECM32P32644 1121 aaKnown RBP9.25□□□□□ -0.93
SNX3YOR357C GCG1P32656 232 aaKnown RBP9.25□□□□□ -0.93
SNX3YOR357C RGD1P38339 666 aa9.25□□□□□ -0.93
SNX3YOR357C HXT8P40886 569 aa9.25□□□□□ -0.93
SNX3YOR357C COS5P47187 383 aa9.25□□□□□ -0.93
SNX3YOR357C CNM67P53865 581 aaKnown RBP9.25□□□□□ -0.93
SNX3YOR357C ATG20Q07528 640 aa9.25□□□□□ -0.93
SNX3YOR357C SCP160P06105 1222 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
SNX3YOR357C ERG11P10614 530 aa9.24□□□□□ -0.93
SNX3YOR357C CLN3P13365 580 aa9.24□□□□□ -0.93
SNX3YOR357C KRS1P15180 591 aaKnown RBP9.24□□□□□ -0.93
SNX3YOR357C NIT1P40447 199 aa9.24□□□□□ -0.93
SNX3YOR357C ULP2P40537 1034 aaPredicted RBP9.24□□□□□ -0.93
SNX3YOR357C GPD2P41911 440 aaKnown RBP9.24□□□□□ -0.93
SNX3YOR357C FIG4P42837 879 aa9.24□□□□□ -0.93
SNX3YOR357C KAP114P53067 1004 aa9.24□□□□□ -0.93
SNX3YOR357C YGL140CP53120 1219 aa9.24□□□□□ -0.93
SNX3YOR357C LIF1P53150 421 aa9.24□□□□□ -0.93
SNX3YOR357C YGR021WP53212 290 aa9.24□□□□□ -0.93
SNX3YOR357C ENV11P53246 860 aa9.24□□□□□ -0.93
SNX3YOR357C DIP5P53388 608 aa9.24□□□□□ -0.93
SNX3YOR357C YLR297WQ05899 129 aa9.24□□□□□ -0.93
SNX3YOR357C CUR1Q06469 252 aa9.24□□□□□ -0.93
SNX3YOR357C CSR1Q06705 408 aaKnown RBP9.24□□□□□ -0.93
SNX3YOR357C RAD1P06777 1100 aa9.23□□□□□ -0.93
SNX3YOR357C SWI6P09959 803 aa9.23□□□□□ -0.93
SNX3YOR357C SUP45P12385 437 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C PRP22P24384 1145 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C PGM2P37012 569 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C PHO88P38264 188 aaPredicted RBP9.23□□□□□ -0.93
SNX3YOR357C SAP1P39955 897 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C ALD6P54115 500 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C URH1Q04179 340 aa9.23□□□□□ -0.93
SNX3YOR357C WHI4Q07655 649 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C HAA1Q12753 694 aaKnown RBP9.23□□□□□ -0.93
SNX3YOR357C TRP2P00899 507 aaKnown RBP9.22□□□□□ -0.93
SNX3YOR357C PHR1P05066 565 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
SNX3YOR357C RAD18P10862 487 aa9.22□□□□□ -0.93
SNX3YOR357C PHO8P11491 566 aa9.22□□□□□ -0.93
SNX3YOR357C ESS1P22696 170 aa9.22□□□□□ -0.93
SNX3YOR357C SUV3P32580 737 aa9.22□□□□□ -0.93
SNX3YOR357C GLC3P32775 704 aa9.22□□□□□ -0.93
SNX3YOR357C PTC4P38089 393 aa9.22□□□□□ -0.93
SNX3YOR357C UBP13P38187 747 aa9.22□□□□□ -0.93
SNX3YOR357C OLA1P38219 394 aaKnown RBP9.22□□□□□ -0.93
SNX3YOR357C RPN3P40016 523 aaKnown RBP9.22□□□□□ -0.93
SNX3YOR357C VHR2P40041 505 aa9.22□□□□□ -0.93
SNX3YOR357C ESBP6P53918 673 aa9.22□□□□□ -0.93
SNX3YOR357C UTP14Q04500 899 aaKnown RBP9.22□□□□□ -0.93
SNX3YOR357C PHM6Q05637 104 aa9.22□□□□□ -0.93
SNX3YOR357C STE23Q06010 1027 aa9.22□□□□□ -0.93
SNX3YOR357C SFH1Q06168 426 aa9.22□□□□□ -0.93
SNX3YOR357C APL5Q08951 932 aaKnown RBP9.22□□□□□ -0.93
SNX3YOR357C PGK1P00560 416 aaKnown RBP9.21□□□□□ -0.94
SNX3YOR357C CBP1P07252 654 aa9.21□□□□□ -0.94
SNX3YOR357C HPR1P17629 752 aaKnown RBP9.21□□□□□ -0.94
SNX3YOR357C CLB5P30283 435 aa9.21□□□□□ -0.94
SNX3YOR357C YEL1P34225 687 aa9.21□□□□□ -0.94
SNX3YOR357C UBP11P36026 717 aa9.21□□□□□ -0.94
SNX3YOR357C MCD4P36051 919 aa9.21□□□□□ -0.94
SNX3YOR357C LAS1P36146 502 aaPredicted RBP9.21□□□□□ -0.94
SNX3YOR357C GDT1P38301 280 aaPredicted RBP9.21□□□□□ -0.94
SNX3YOR357C ACA1P39970 489 aa9.21□□□□□ -0.94
SNX3YOR357C RPC17P47076 161 aa9.21□□□□□ -0.94
SNX3YOR357C YJR079WP47126 109 aa9.21□□□□□ -0.94
SNX3YOR357C YGR117CP53270 476 aa9.21□□□□□ -0.94
SNX3YOR357C YGR130CP53278 816 aa9.21□□□□□ -0.94
SNX3YOR357C SYH1Q02875 849 aaKnown RBP9.21□□□□□ -0.94
SNX3YOR357C ECI1Q05871 280 aa9.21□□□□□ -0.94
SNX3YOR357C YLR326WQ06170 240 aaKnown RBP9.21□□□□□ -0.94
SNX3YOR357C SUB2Q07478 446 aaKnown RBP9.21□□□□□ -0.94
SNX3YOR357C RLP24Q07915 199 aaKnown RBP9.21□□□□□ -0.94
SNX3YOR357C YOR223WQ12015 292 aa9.21□□□□□ -0.94
SNX3YOR357C ZRT2Q12436 422 aa9.21□□□□□ -0.94
SNX3YOR357C CHS2P14180 963 aa9.2□□□□□ -0.94
SNX3YOR357C UBC6P33296 250 aaPredicted RBP9.2□□□□□ -0.94
SNX3YOR357C SLD2P34252 453 aa9.2□□□□□ -0.94
SNX3YOR357C BLI1P35727 113 aa9.2□□□□□ -0.94
SNX3YOR357C YKL023WP36103 277 aaKnown RBP9.2□□□□□ -0.94
SNX3YOR357C SPP381P38282 291 aaPredicted RBP9.2□□□□□ -0.94
SNX3YOR357C RCK2P38623 610 aa9.2□□□□□ -0.94
SNX3YOR357C FIS1P40515 155 aa9.2□□□□□ -0.94
SNX3YOR357C PXA1P41909 870 aa9.2□□□□□ -0.94
SNX3YOR357C DIG1Q03063 452 aaKnown RBP9.2□□□□□ -0.94
SNX3YOR357C YML037CQ03703 340 aa9.2□□□□□ -0.94
SNX3YOR357C YMR018WQ04364 514 aa9.2□□□□□ -0.94
SNX3YOR357C RIO1Q12196 484 aaKnown RBP9.2□□□□□ -0.94
SNX3YOR357C GAP1P19145 602 aaPredicted RBP9.19□□□□□ -0.94
SNX3YOR357C YKR023WP36119 530 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 136.2 ms