RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS17	YOR132W	SIN3	P22579	1536 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	ENA1	P13587	1091 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	ARE1	P25628	610 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	RPC82	P32349	654 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	TOD6	P34219	525 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	YRO2	P38079	344 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	ENA2	Q01896	1091 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	DUS4	Q06063	367 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	RXT3	Q07458	294 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	ENA5	Q12691	1091 aa		4.67	□□□□□ -1.66
VPS17	YOR132W	HSP60	P19882	572 aa	Known RBP	4.66	□□□□□ -1.66
VPS17	YOR132W	HBS1	P32769	611 aa	Known RBP	4.66	□□□□□ -1.66
VPS17	YOR132W	DOM34	P33309	386 aa		4.66	□□□□□ -1.66
VPS17	YOR132W	MND2	P40577	368 aa		4.66	□□□□□ -1.66
VPS17	YOR132W	GPB1	Q08886	897 aa		4.66	□□□□□ -1.66
VPS17	YOR132W	THO2	P53552	1597 aa	Known RBP	4.65	□□□□□ -1.66
VPS17	YOR132W	SSK2	P53599	1579 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	CCC2	P38995	1004 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	YER158C	P40095	573 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	YGR012W	P53206	393 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	GTF1	P53260	183 aa	Predicted RBP	4.65	□□□□□ -1.66
VPS17	YOR132W	YGR125W	P53273	1036 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	YPR196W	Q06595	470 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	UBX5	Q06682	500 aa		4.65	□□□□□ -1.66
VPS17	YOR132W	TAF2	P23255	1407 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	YLR358C	O13565	187 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	RPP2A	P05319	106 aa	Known RBP	4.64	□□□□□ -1.67
VPS17	YOR132W	HSF1	P10961	833 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	CDC48	P25694	835 aa	Known RBP	4.64	□□□□□ -1.67
VPS17	YOR132W	POA1	P38218	177 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	TSL1	P38427	1098 aa	Known RBP	4.64	□□□□□ -1.67
VPS17	YOR132W	NPP2	P39997	493 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	SFB2	P53953	876 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	ACK1	Q07622	623 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS17	YOR132W	CIT1	P00890	479 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
VPS17	YOR132W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
VPS17	YOR132W	NPP1	P25353	742 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	SRP101	P32916	621 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	HUL4	P40985	892 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	PSP2	P50109	593 aa	Known RBP	4.64	□□□□□ -1.67
VPS17	YOR132W	HUL5	P53119	910 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	LCD1	Q04377	747 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	NSE3	Q05541	303 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	TPO1	Q07824	586 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	FLC1	Q08967	793 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	YOL098C	Q12496	1037 aa		4.64	□□□□□ -1.67
VPS17	YOR132W	CDC6	P09119	513 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	CDC20	P26309	610 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	AFR1	P33304	620 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	CCM1	P48237	864 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS17	YOR132W	GCV2	P49095	1034 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	VPS62	P53285	467 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	CDA1	Q06702	301 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	BDF2	Q07442	638 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	CDC53	Q12018	815 aa	Known RBP	4.63	□□□□□ -1.67
VPS17	YOR132W	YPR071W	Q12346	211 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	HBN1	Q96VH4	193 aa		4.63	□□□□□ -1.67
VPS17	YOR132W	YBR284W	P38150	797 aa		4.62	□□□□□ -1.67
VPS17	YOR132W	YBR238C	P38330	731 aa	Known RBP	4.62	□□□□□ -1.67
VPS17	YOR132W	YHR020W	P38708	688 aa	Known RBP	4.62	□□□□□ -1.67
VPS17	YOR132W	OCA5	P38738	679 aa		4.62	□□□□□ -1.67
VPS17	YOR132W	MET12	P46151	657 aa		4.62	□□□□□ -1.67
VPS17	YOR132W	YKE2	P52553	114 aa		4.62	□□□□□ -1.67
VPS17	YOR132W	ADY3	Q07732	790 aa		4.62	□□□□□ -1.67
VPS17	YOR132W	HMI1	Q12039	706 aa		4.62	□□□□□ -1.67
VPS17	YOR132W	EMC1	P25574	760 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	SRP40	P32583	406 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	REC104	P33323	182 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	GGA2	P38817	585 aa	Known RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	BUL2	Q03758	920 aa	Known RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	YDL124W	Q07551	312 aa	Known RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	NOP12	Q08208	459 aa	Known RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	YOR131C	Q12486	218 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	SKI3	P17883	1432 aa	Known RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	HIS5	P07172	385 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	PET10	P36139	283 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	FLR1	P38124	548 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	RSP5	P39940	809 aa	Known RBP	4.61	□□□□□ -1.67
VPS17	YOR132W	TOK1	P40310	691 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	IOC3	P43596	787 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
VPS17	YOR132W	ESC8	Q08119	714 aa		4.61	□□□□□ -1.67
VPS17	YOR132W	YTA7	P40340	1379 aa		4.6	□□□□□ -1.67
VPS17	YOR132W	ESP1	Q03018	1630 aa		4.6	□□□□□ -1.67
VPS17	YOR132W	TOP1	P04786	769 aa		4.6	□□□□□ -1.67
VPS17	YOR132W	SPE1	P08432	466 aa		4.6	□□□□□ -1.67
VPS17	YOR132W	RAI1	P53063	387 aa	Known RBP	4.6	□□□□□ -1.67
VPS17	YOR132W	CLU1	Q03690	1277 aa	Known RBP	4.6	□□□□□ -1.67
VPS17	YOR132W	TAF8	Q03750	510 aa		4.6	□□□□□ -1.67
VPS17	YOR132W	YAP6	Q03935	383 aa		4.6	□□□□□ -1.67
VPS17	YOR132W	CHD1	P32657	1468 aa		4.59	□□□□□ -1.67
VPS17	YOR132W	MMS22	Q06164	1454 aa		4.59	□□□□□ -1.67
VPS17	YOR132W	MSD1	P15179	658 aa	Known RBP	4.59	□□□□□ -1.67
VPS17	YOR132W	GAL11	P19659	1081 aa		4.59	□□□□□ -1.67
VPS17	YOR132W	VPS30	Q02948	557 aa		4.59	□□□□□ -1.67
VPS17	YOR132W	YLR224W	Q05947	369 aa		4.59	□□□□□ -1.67
VPS17	YOR132W	CAN1	P04817	590 aa		4.58	□□□□□ -1.68
VPS17	YOR132W	NOT3	P06102	836 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms