RNA–Protein interactions for RNA: YNL139C

THO2, Transcript of Subunit of the THO complex, yeast

Gene THO2, Length 4,794 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THO2	YNL139C	FLC1	Q08967	793 aa		0.61	□□□□□ -2.31
THO2	YNL139C	REC8	Q12188	680 aa		0.61	□□□□□ -2.31
THO2	YNL139C	TY1A-NL1	Q12391	440 aa	Known RBP	0.61	□□□□□ -2.31
THO2	YNL139C	YPR109W	Q06104	294 aa		0.61	□□□□□ -2.31
THO2	YNL139C	YAP7	Q08182	245 aa		0.61	□□□□□ -2.31
THO2	YNL139C	NEW1	Q08972	1196 aa	Known RBP	0.61	□□□□□ -2.31
THO2	YNL139C	NGR1	P32831	672 aa	Known RBP	0.61	□□□□□ -2.31
THO2	YNL139C	RAD54	P32863	898 aa		0.61	□□□□□ -2.31
THO2	YNL139C	LRG1	P35688	1017 aa		0.61	□□□□□ -2.31
THO2	YNL139C	BUD16	P39988	312 aa		0.61	□□□□□ -2.31
THO2	YNL139C	CHZ1	P40019	153 aa	Predicted RBP	0.61	□□□□□ -2.31
THO2	YNL139C	PSF2	P40359	213 aa		0.61	□□□□□ -2.31
THO2	YNL139C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	RIP-Chip
THO2	YNL139C	DUS3	Q06053	668 aa	Known RBP	0.61	□□□□□ -2.31
THO2	YNL139C	CDC48	P25694	835 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	CDC60	P26637	1090 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	SWC3	P31376	625 aa		0.6	□□□□□ -2.31
THO2	YNL139C	ASG1	P40467	964 aa		0.6	□□□□□ -2.31
THO2	YNL139C	MET13	P53128	600 aa		0.6	□□□□□ -2.31
THO2	YNL139C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
THO2	YNL139C	HIS4	P00815	799 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	SEC18	P18759	758 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	SDS24	P38314	527 aa		0.6	□□□□□ -2.31
THO2	YNL139C	RRT2	P38332	387 aa		0.6	□□□□□ -2.31
THO2	YNL139C	YHL008C	P38750	627 aa		0.6	□□□□□ -2.31
THO2	YNL139C	MRK1	P50873	501 aa		0.6	□□□□□ -2.31
THO2	YNL139C	PUS6	P53294	404 aa		0.6	□□□□□ -2.31
THO2	YNL139C	NIS1	P53939	407 aa		0.6	□□□□□ -2.31
THO2	YNL139C	SIZ1	Q04195	904 aa		0.6	□□□□□ -2.31
THO2	YNL139C	HFD1	Q04458	532 aa		0.6	□□□□□ -2.31
THO2	YNL139C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
THO2	YNL139C	LDB16	P25587	256 aa		0.6	□□□□□ -2.31
THO2	YNL139C	DOT6	P40059	670 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	VID27	P40157	782 aa		0.6	□□□□□ -2.31
THO2	YNL139C	YJR030C	P47101	745 aa		0.6	□□□□□ -2.31
THO2	YNL139C	ARP4	P80428	489 aa		0.6	□□□□□ -2.31
THO2	YNL139C	SCW10	Q04951	389 aa		0.6	□□□□□ -2.31
THO2	YNL139C	MOT1	P32333	1867 aa		0.6	□□□□□ -2.31
THO2	YNL139C	SWI6	P09959	803 aa		0.6	□□□□□ -2.31
THO2	YNL139C	GAS1	P22146	559 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	ISF1	P32488	338 aa		0.6	□□□□□ -2.31
THO2	YNL139C	KSP1	P38691	1029 aa	Known RBP	0.6	□□□□□ -2.31
THO2	YNL139C	IRC8	P47046	822 aa		0.6	□□□□□ -2.31
THO2	YNL139C	LYS4	P49367	693 aa	Predicted RBP	0.6	□□□□□ -2.31
THO2	YNL139C	SCS3	P53012	380 aa		0.6	□□□□□ -2.31
THO2	YNL139C	YDR090C	Q03193	310 aa		0.6	□□□□□ -2.31
THO2	YNL139C	SPO71	Q03868	1245 aa		0.6	□□□□□ -2.31
THO2	YNL139C	DSF2	P38213	736 aa		0.59	□□□□□ -2.31
THO2	YNL139C	MVP1	P40959	511 aa	Known RBP	0.59	□□□□□ -2.31
THO2	YNL139C	SKP2	P42843	763 aa		0.59	□□□□□ -2.31
THO2	YNL139C	TIM44	Q01852	431 aa		0.59	□□□□□ -2.31
THO2	YNL139C	PIG1	Q06216	648 aa		0.59	□□□□□ -2.31
THO2	YNL139C	AAD4	Q07747	329 aa		0.59	□□□□□ -2.31
THO2	YNL139C	PHO2	P07269	559 aa		0.59	□□□□□ -2.31
THO2	YNL139C	ESS1	P22696	170 aa		0.59	□□□□□ -2.31
THO2	YNL139C	MBR1	P23493	339 aa		0.59	□□□□□ -2.31
THO2	YNL139C	SRO9	P25567	434 aa	Known RBP	0.59	□□□□□ -2.31
THO2	YNL139C	TTI1	P36097	1038 aa		0.59	□□□□□ -2.31
THO2	YNL139C	NEM1	P38757	446 aa		0.59	□□□□□ -2.31
THO2	YNL139C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
THO2	YNL139C	SAH1	P39954	449 aa	Known RBP	0.59	□□□□□ -2.31
THO2	YNL139C	VAB2	P40003	282 aa		0.59	□□□□□ -2.31
THO2	YNL139C	NCE103	P53615	221 aa		0.59	□□□□□ -2.31
THO2	YNL139C	RRN11	Q04712	507 aa		0.59	□□□□□ -2.31
THO2	YNL139C	YLR281C	Q05863	155 aa		0.59	□□□□□ -2.31
THO2	YNL139C	TY1B-A	O13527	1196 aa	Known RBP	0.59	□□□□□ -2.32
THO2	YNL139C	TUB3	P09734	445 aa	Known RBP	0.59	□□□□□ -2.32
THO2	YNL139C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.32	not detected
THO2	YNL139C	EFT1	P32324	842 aa	Known RBP	0.59	□□□□□ -2.32
THO2	YNL139C	SEC8	P32855	1065 aa		0.59	□□□□□ -2.32
THO2	YNL139C	PPE1	P38796	400 aa		0.59	□□□□□ -2.32
THO2	YNL139C	MKT1	P40850	830 aa	Known RBP	0.59	□□□□□ -2.32
THO2	YNL139C	MCA1	Q08601	432 aa		0.59	□□□□□ -2.32
THO2	YNL139C	TMS1	Q12116	473 aa		0.59	□□□□□ -2.32
THO2	YNL139C	YPR117W	Q06116	2489 aa		0.59	□□□□□ -2.32
THO2	YNL139C	SEC3	P33332	1336 aa	Known RBP	0.59	□□□□□ -2.32
THO2	YNL139C	CYC7	P00045	113 aa		0.58	□□□□□ -2.32
THO2	YNL139C	TOM70	P07213	617 aa	Known RBP	0.58	□□□□□ -2.32
THO2	YNL139C	HCA4	P20448	770 aa	Known RBP	0.58	□□□□□ -2.32
THO2	YNL139C	SLY41	P22215	453 aa		0.58	□□□□□ -2.32
THO2	YNL139C	PRP45	P28004	379 aa	Predicted RBP	0.58	□□□□□ -2.32
THO2	YNL139C	YKU70	P32807	602 aa		0.58	□□□□□ -2.32
THO2	YNL139C	UIP5	P36137	443 aa		0.58	□□□□□ -2.32
THO2	YNL139C	SHM2	P37291	469 aa	Known RBP	0.58	□□□□□ -2.32
THO2	YNL139C	GTS1	P40956	396 aa		0.58	□□□□□ -2.32
THO2	YNL139C	LYS14	P40971	790 aa		0.58	□□□□□ -2.32
THO2	YNL139C	NUP53	Q03790	475 aa		0.58	□□□□□ -2.32
THO2	YNL139C	MSH6	Q03834	1242 aa		0.58	□□□□□ -2.32
THO2	YNL139C	SEG1	Q04279	960 aa		0.58	□□□□□ -2.32
THO2	YNL139C	COX6	P00427	148 aa		0.58	□□□□□ -2.32
THO2	YNL139C	KTR2	P33550	425 aa		0.58	□□□□□ -2.32
THO2	YNL139C	GPT2	P36148	743 aa		0.58	□□□□□ -2.32
THO2	YNL139C	PGM2	P37012	569 aa	Known RBP	0.58	□□□□□ -2.32
THO2	YNL139C	RPL34B	P40525	121 aa	Known RBP	0.58	□□□□□ -2.32
THO2	YNL139C	MEP2	P41948	499 aa		0.58	□□□□□ -2.32
THO2	YNL139C	APL6	P46682	809 aa		0.58	□□□□□ -2.32
THO2	YNL139C	MRPL22	P53881	309 aa		0.58	□□□□□ -2.32
THO2	YNL139C	FCP1	Q03254	732 aa		0.58	□□□□□ -2.32
THO2	YNL139C	FRT1	Q99332	602 aa		0.58	□□□□□ -2.32
THO2	YNL139C	SMY2	P32909	740 aa	Known RBP	0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms