RNA–Protein interactions for RNA: YNL032W

SIW14, Transcript of Tyrosine phosphatase involved in actin organization and endocytosis, yeast

Gene SIW14, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIW14	YNL032W	OSM1	P21375	501 aa	Known RBP	4.69	□□□□□ -1.66
SIW14	YNL032W	PRO1	P32264	428 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	YHL017W	P38745	532 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	SAM37	P50110	327 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	ALT1	P52893	592 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	CTR9	P89105	1077 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	YIG1	Q08956	461 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	SAC3	P46674	1301 aa		4.69	□□□□□ -1.66
SIW14	YNL032W	RPL22A	P05749	121 aa	Known RBP	4.68	□□□□□ -1.66
SIW14	YNL032W	OPI1	P21957	404 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	MRPL10	P36520	322 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	TCD1	P38756	429 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	CCT5	P40413	562 aa	Known RBP	4.68	□□□□□ -1.66
SIW14	YNL032W	STU2	P46675	888 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	YBP2	P53169	641 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	YGR122W	P53272	402 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	MRPL22	P53881	309 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	ATG13	Q06628	738 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	PEX19	Q07418	342 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	NOC3	Q07896	663 aa	Predicted RBP	4.68	□□□□□ -1.66
SIW14	YNL032W	ALE1	Q08548	619 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	ALG6	Q12001	544 aa	Known RBP	4.68	□□□□□ -1.66
SIW14	YNL032W	WHI5	Q12416	295 aa		4.68	□□□□□ -1.66
SIW14	YNL032W	HTS1	P07263	546 aa	Known RBP	4.67	□□□□□ -1.66
SIW14	YNL032W	LPD1	P09624	499 aa	Known RBP	4.67	□□□□□ -1.66
SIW14	YNL032W	HEM3	P28789	327 aa		4.67	□□□□□ -1.66
SIW14	YNL032W	MET4	P32389	672 aa		4.67	□□□□□ -1.66
SIW14	YNL032W	PRX1	P34227	261 aa	Known RBP	4.67	□□□□□ -1.66
SIW14	YNL032W	PBY1	P38254	753 aa		4.67	□□□□□ -1.66
SIW14	YNL032W	TFG2	P41896	400 aa	Predicted RBP	4.67	□□□□□ -1.66
SIW14	YNL032W	MRPS35	P53292	345 aa		4.67	□□□□□ -1.66
SIW14	YNL032W	YPL150W	Q12152	901 aa		4.67	□□□□□ -1.66
SIW14	YNL032W	YDL177C	Q12257	170 aa		4.67	□□□□□ -1.66
SIW14	YNL032W	DDP1	Q99321	188 aa	Known RBP	4.67	□□□□□ -1.66
SIW14	YNL032W	FLP1	P03870	423 aa		4.66	□□□□□ -1.66
SIW14	YNL032W	PHO4	P07270	312 aa	Known RBP	4.66	□□□□□ -1.66
SIW14	YNL032W	GRX1	P25373	110 aa	Known RBP	4.66	□□□□□ -1.66
SIW14	YNL032W	SWC3	P31376	625 aa		4.66	□□□□□ -1.66
SIW14	YNL032W	SPC110	P32380	944 aa		4.66	□□□□□ -1.66
SIW14	YNL032W	GCD6	P32501	712 aa	Known RBP	4.66	□□□□□ -1.66
SIW14	YNL032W	CIC1	P38779	376 aa	Known RBP	4.66	□□□□□ -1.66
SIW14	YNL032W	TPM2	P40414	161 aa		4.66	□□□□□ -1.66
SIW14	YNL032W	RIM8	P53179	542 aa		4.66	□□□□□ -1.66
SIW14	YNL032W	ADE16	P54113	591 aa	Known RBP	4.66	□□□□□ -1.66
SIW14	YNL032W	COB	P00163	385 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	PIF1	P07271	859 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	MATALPHA2	P0CY08	210 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	HMLALPHA2	P0CY09	210 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	PGI1	P12709	554 aa	Known RBP	4.65	□□□□□ -1.67
SIW14	YNL032W	NPR1	P22211	790 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	VPS35	P34110	944 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	RFT1	P38206	574 aa	Predicted RBP	4.65	□□□□□ -1.67
SIW14	YNL032W	PTC7	P38797	343 aa		4.65	□□□□□ -1.67
SIW14	YNL032W	SSF2	Q12153	453 aa	Predicted RBP	4.65	□□□□□ -1.67
SIW14	YNL032W	SSK22	P25390	1331 aa	Predicted RBP	4.65	□□□□□ -1.67
SIW14	YNL032W	CYC8	P14922	966 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	NFS1	P25374	497 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	ASF1	P32447	279 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	DUR3	P33413	735 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SIW14	YNL032W	YKL133C	P36066	463 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	REI1	P38344	393 aa	Predicted RBP	4.64	□□□□□ -1.67
SIW14	YNL032W	RIM11	P38615	370 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	ENP2	P48234	707 aa	Known RBP	4.64	□□□□□ -1.67
SIW14	YNL032W	YKE2	P52553	114 aa		4.64	□□□□□ -1.67
SIW14	YNL032W	CMR1	Q12510	522 aa	Known RBP	4.64	□□□□□ -1.67
SIW14	YNL032W	PEP3	P27801	918 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	MCM2	P29469	868 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	TOD6	P34219	525 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	YKT6	P36015	200 aa	Known RBP	4.63	□□□□□ -1.67
SIW14	YNL032W	NPR3	P38742	1146 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	DAK2	P43550	591 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	NUT1	P53114	1132 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	ZDS2	P54786	942 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	HOS3	Q02959	697 aa	Known RBP	4.63	□□□□□ -1.67
SIW14	YNL032W	GSF2	Q04697	403 aa	Known RBP	4.63	□□□□□ -1.67
SIW14	YNL032W	YCS4	Q06156	1176 aa		4.63	□□□□□ -1.67
SIW14	YNL032W	SNU66	Q12420	587 aa	Predicted RBP	4.63	□□□□□ -1.67
SIW14	YNL032W	CPA2	P03965	1118 aa	Known RBP	4.62	□□□□□ -1.67
SIW14	YNL032W	PET111	P08468	800 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	CBP3	P21560	335 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	ETP1	P38748	585 aa	Known RBP	4.62	□□□□□ -1.67
SIW14	YNL032W	GTS1	P40956	396 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	CEP3	P40969	608 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	YPT11	P48559	417 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	CTF18	P49956	741 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	UTP22	P53254	1237 aa	Predicted RBP	4.62	□□□□□ -1.67
SIW14	YNL032W	ELA1	P53861	379 aa	Predicted RBP	4.62	□□□□□ -1.67
SIW14	YNL032W	ARP5	P53946	755 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	PKH1	Q03407	766 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	VPS64	Q03944	604 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	YLR407W	Q06070	228 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	PMT7	Q06644	662 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	OXR1	Q08952	273 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	YPL277C	Q08989	487 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	ADR1	P07248	1323 aa		4.62	□□□□□ -1.67
SIW14	YNL032W	DUR1,2	P32528	1835 aa	Known RBP	4.62	□□□□□ -1.67
SIW14	YNL032W	SOD2	P00447	233 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	ATE1	P16639	503 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	DID4	P36108	232 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms