RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W LCD1Q04377 747 aa17.09■□□□□ 0.33
CCC1YLR220W CLC1P17891 233 aa17.08■□□□□ 0.32
CCC1YLR220W EAF5P39995 279 aa17.08■□□□□ 0.32
CCC1YLR220W GFD1Q04839 188 aaKnown RBP17.08■□□□□ 0.32
CCC1YLR220W NOC3Q07896 663 aaPredicted RBP17.08■□□□□ 0.32
CCC1YLR220W MAM3Q12296 706 aa17.08■□□□□ 0.32
CCC1YLR220W DAL7P21826 554 aa17.07■□□□□ 0.32
CCC1YLR220W RPC53P25441 422 aa17.07■□□□□ 0.32
CCC1YLR220W AVT1P47082 602 aa17.07■□□□□ 0.32
CCC1YLR220W HCR1Q05775 265 aaKnown RBP17.07■□□□□ 0.32
CCC1YLR220W MAK16P10962 306 aaPredicted RBP17.06■□□□□ 0.32
CCC1YLR220W TRK2P28584 889 aa17.06■□□□□ 0.32
CCC1YLR220W NAM7P30771 971 aaKnown RBP17.06■□□□□ 0.32
CCC1YLR220W MNN4P36044 1178 aa17.06■□□□□ 0.32
CCC1YLR220W MRPL10P36520 322 aa17.06■□□□□ 0.32
CCC1YLR220W PSY4P38193 441 aa17.06■□□□□ 0.32
CCC1YLR220W GUA1P38625 525 aaKnown RBP17.06■□□□□ 0.32
CCC1YLR220W ERC1P38767 581 aa17.06■□□□□ 0.32
CCC1YLR220W RTT102P53330 157 aa17.06■□□□□ 0.32
CCC1YLR220W CUS1Q02554 436 aaPredicted RBP17.06■□□□□ 0.32
CCC1YLR220W YPR148CQ06523 435 aa17.06■□□□□ 0.32
CCC1YLR220W ECM30Q06673 1274 aa17.06■□□□□ 0.32
CCC1YLR220W YOL075CQ08234 1294 aa17.06■□□□□ 0.32
CCC1YLR220W IES4Q08561 116 aa17.06■□□□□ 0.32
CCC1YLR220W TFC8Q12308 588 aa17.06■□□□□ 0.32
CCC1YLR220W MED1Q12321 566 aa17.06■□□□□ 0.32
CCC1YLR220W SDH2P21801 266 aa17.05■□□□□ 0.32
CCC1YLR220W PSO2P30620 661 aa17.05■□□□□ 0.32
CCC1YLR220W VPS35P34110 944 aa17.05■□□□□ 0.32
CCC1YLR220W YEL1P34225 687 aa17.05■□□□□ 0.32
CCC1YLR220W EBS1Q03466 884 aaKnown RBP17.05■□□□□ 0.32
CCC1YLR220W HIF1Q12373 385 aa17.05■□□□□ 0.32
CCC1YLR220W HEM1P09950 548 aaPredicted RBP17.04■□□□□ 0.32
CCC1YLR220W PHO8P11491 566 aa17.04■□□□□ 0.32
CCC1YLR220W OM45P16547 393 aa17.04■□□□□ 0.32
CCC1YLR220W TFG2P41896 400 aaPredicted RBP17.04■□□□□ 0.32
CCC1YLR220W JJJ3P47138 172 aa17.04■□□□□ 0.32
CCC1YLR220W TAM41P53230 385 aa17.04■□□□□ 0.32
CCC1YLR220W WAR1Q03631 944 aa17.04■□□□□ 0.32
CCC1YLR220W COG4Q06096 861 aa17.04■□□□□ 0.32
CCC1YLR220W PIB1Q06651 286 aa17.04■□□□□ 0.32
CCC1YLR220W YPL216WQ08964 1102 aa17.04■□□□□ 0.32
CCC1YLR220W VPS13Q07878 3144 aa17.03■□□□□ 0.32
CCC1YLR220W MRF1P30775 413 aaPredicted RBP17.03■□□□□ 0.32
CCC1YLR220W DPH2P32461 534 aa17.03■□□□□ 0.32
CCC1YLR220W DUR3P33413 735 aa17.03■□□□□ 0.32
CCC1YLR220W UBP5P39944 805 aa17.03■□□□□ 0.32
CCC1YLR220W HFI1Q12060 488 aa17.03■□□□□ 0.32
CCC1YLR220W MRC1P25588 1096 aa17.02■□□□□ 0.32
CCC1YLR220W MSS51P32335 436 aa17.02■□□□□ 0.32
CCC1YLR220W ACF4P47129 309 aa17.02■□□□□ 0.32
CCC1YLR220W CCM1P48237 864 aaPredicted RBP17.02■□□□□ 0.32
CCC1YLR220W TMA16Q08687 178 aa17.02■□□□□ 0.32
CCC1YLR220W CDC53Q12018 815 aaKnown RBP17.02■□□□□ 0.32
CCC1YLR220W MOT1P32333 1867 aa17.01■□□□□ 0.31
CCC1YLR220W TMT1P32643 299 aa17.01■□□□□ 0.31
CCC1YLR220W MPE1P35728 441 aaKnown RBP17.01■□□□□ 0.31
CCC1YLR220W PAM1P37304 830 aaKnown RBP17.01■□□□□ 0.31
CCC1YLR220W SAD1P43589 448 aa17.01■□□□□ 0.31
CCC1YLR220W TOS3P43637 560 aa17.01■□□□□ 0.31
CCC1YLR220W YNL146WP53906 100 aa17.01■□□□□ 0.31
CCC1YLR220W FMP30Q02883 468 aa17.01■□□□□ 0.31
CCC1YLR220W OSW2Q12202 724 aa17.01■□□□□ 0.31
CCC1YLR220W CDC37P06101 506 aaKnown RBP17■□□□□ 0.31
CCC1YLR220W KTR2P33550 425 aa17■□□□□ 0.31
CCC1YLR220W ALD5P40047 520 aaKnown RBP17■□□□□ 0.31
CCC1YLR220W AZR1P50080 613 aa17■□□□□ 0.31
CCC1YLR220W YPL034WQ03083 165 aa17■□□□□ 0.31
CCC1YLR220W YET1P35723 206 aa16.99■□□□□ 0.31
CCC1YLR220W LCB2P40970 561 aa16.99■□□□□ 0.31
CCC1YLR220W VTC3Q02725 835 aa16.99■□□□□ 0.31
CCC1YLR220W ECM7Q06200 448 aa16.99■□□□□ 0.31
CCC1YLR220W YAP7Q08182 245 aa16.99■□□□□ 0.31
CCC1YLR220W ENV11P53246 860 aa16.98■□□□□ 0.31
CCC1YLR220W VPS72Q03388 795 aa16.98■□□□□ 0.31
CCC1YLR220W LDB19Q12502 818 aa16.98■□□□□ 0.31
CCC1YLR220W SHE10P53075 577 aa16.97■□□□□ 0.31
CCC1YLR220W YDR524C-BQ3E6R4 66 aa16.97■□□□□ 0.31
CCC1YLR220W RLP24Q07915 199 aaKnown RBP16.96■□□□□ 0.31
CCC1YLR220W PXL1P36166 706 aa16.95■□□□□ 0.3
CCC1YLR220W EFM2P38347 419 aa16.95■□□□□ 0.3
CCC1YLR220W FIG4P42837 879 aa16.95■□□□□ 0.3
CCC1YLR220W CUL3P53202 744 aa16.95■□□□□ 0.3
CCC1YLR220W DON1Q05610 365 aa16.95■□□□□ 0.3
CCC1YLR220W FAL1Q12099 399 aaKnown RBP16.95■□□□□ 0.3
CCC1YLR220W SCP160P06105 1222 aaKnown RBP RIP-Chip data16.94■□□□□ 0.3not detected
CCC1YLR220W WHI2P12611 486 aa16.94■□□□□ 0.3
CCC1YLR220W CTM1P38818 585 aa16.94■□□□□ 0.3
CCC1YLR220W TVP23P38962 199 aa16.94■□□□□ 0.3
CCC1YLR220W MNP1P53163 194 aaPredicted RBP16.94■□□□□ 0.3
CCC1YLR220W SSD1P24276 1250 aaKnown RBP RIP-Chip data16.93■□□□□ 0.3not detected
CCC1YLR220W YFL040WP43562 540 aa16.93■□□□□ 0.3
CCC1YLR220W MUK1Q02866 612 aa16.93■□□□□ 0.3
CCC1YLR220W SPO11P23179 398 aa16.92■□□□□ 0.3
CCC1YLR220W SAP190P36123 1033 aa16.92■□□□□ 0.3
CCC1YLR220W MRX3P38172 270 aa16.92■□□□□ 0.3
CCC1YLR220W MIP6P38760 659 aaKnown RBP16.92■□□□□ 0.3
CCC1YLR220W YDR090CQ03193 310 aa16.92■□□□□ 0.3
CCC1YLR220W RIF1P29539 1916 aa16.92■□□□□ 0.3
CCC1YLR220W APL1P27351 700 aa16.91■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms