RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C VTC2P43585 828 aa11.21□□□□□ -0.61
YSR3YKR053C RTT102P53330 157 aa11.21□□□□□ -0.61
YSR3YKR053C SEC5P89102 971 aa11.21□□□□□ -0.61
YSR3YKR053C COG8Q04632 607 aa11.21□□□□□ -0.61
YSR3YKR053C IES4Q08561 116 aa11.21□□□□□ -0.61
YSR3YKR053C BMH1P29311 267 aaKnown RBP11.2□□□□□ -0.62
YSR3YKR053C PGM2P37012 569 aaKnown RBP11.2□□□□□ -0.62
YSR3YKR053C SLX1P38324 304 aa11.2□□□□□ -0.62
YSR3YKR053C OPT1P40897 799 aa11.2□□□□□ -0.62
YSR3YKR053C YNL146WP53906 100 aa11.2□□□□□ -0.62
YSR3YKR053C CUR1Q06469 252 aa11.2□□□□□ -0.62
YSR3YKR053C OSW2Q12202 724 aa11.2□□□□□ -0.62
YSR3YKR053C YDR034W-BQ6Q5X2 51 aa11.2□□□□□ -0.62
YSR3YKR053C SPT2P06843 333 aaPredicted RBP11.19□□□□□ -0.62
YSR3YKR053C UBX7P38349 436 aa11.19□□□□□ -0.62
YSR3YKR053C YHL026CP38740 315 aa11.19□□□□□ -0.62
YSR3YKR053C DOT1Q04089 582 aaKnown RBP11.19□□□□□ -0.62
YSR3YKR053C EMI2Q04409 500 aaKnown RBP11.19□□□□□ -0.62
YSR3YKR053C ECM7Q06200 448 aa11.19□□□□□ -0.62
YSR3YKR053C POL3P15436 1097 aa11.18□□□□□ -0.62
YSR3YKR053C IDI1P15496 288 aa11.18□□□□□ -0.62
YSR3YKR053C YSC83P32792 385 aa11.18□□□□□ -0.62
YSR3YKR053C ERC1P38767 581 aa11.18□□□□□ -0.62
YSR3YKR053C SNF7P39929 240 aaKnown RBP11.18□□□□□ -0.62
YSR3YKR053C BUD16P39988 312 aa11.18□□□□□ -0.62
YSR3YKR053C ALT2P52892 507 aa11.18□□□□□ -0.62
YSR3YKR053C MET13P53128 600 aa11.18□□□□□ -0.62
YSR3YKR053C MNP1P53163 194 aaPredicted RBP11.18□□□□□ -0.62
YSR3YKR053C CUL3P53202 744 aa11.18□□□□□ -0.62
YSR3YKR053C YLR455WQ06188 304 aa11.18□□□□□ -0.62
YSR3YKR053C PCK1P10963 549 aa11.17□□□□□ -0.62
YSR3YKR053C HIR1P32479 840 aa11.17□□□□□ -0.62
YSR3YKR053C MRX3P38172 270 aa11.17□□□□□ -0.62
YSR3YKR053C ESL1P40456 1118 aa11.17□□□□□ -0.62
YSR3YKR053C HYR1P40581 163 aaKnown RBP11.17□□□□□ -0.62
YSR3YKR053C HEH2Q03281 663 aa11.17□□□□□ -0.62
YSR3YKR053C PEX19Q07418 342 aa11.17□□□□□ -0.62
YSR3YKR053C RPL22AP05749 121 aaKnown RBP11.16□□□□□ -0.62
YSR3YKR053C GLN3P18494 730 aa11.16□□□□□ -0.62
YSR3YKR053C SKG6P32900 734 aaPredicted RBP11.16□□□□□ -0.62
YSR3YKR053C UBP13P38187 747 aa11.16□□□□□ -0.62
YSR3YKR053C APN2P38207 520 aa11.16□□□□□ -0.62
YSR3YKR053C BDH2P39713 417 aa11.16□□□□□ -0.62
YSR3YKR053C LAM5P43560 674 aa11.16□□□□□ -0.62
YSR3YKR053C YGL081WP53156 320 aa11.16□□□□□ -0.62
YSR3YKR053C TPO2P53283 614 aa11.16□□□□□ -0.62
YSR3YKR053C HST1P53685 503 aa11.16□□□□□ -0.62
YSR3YKR053C TOF1P53840 1238 aa11.16□□□□□ -0.62
YSR3YKR053C LSP1Q12230 341 aaKnown RBP11.16□□□□□ -0.62
YSR3YKR053C NAM7P30771 971 aaKnown RBP11.15□□□□□ -0.62
YSR3YKR053C RPT1P33299 467 aaKnown RBP11.15□□□□□ -0.62
YSR3YKR053C MRPL7P36519 292 aa11.15□□□□□ -0.62
YSR3YKR053C PPS1P38148 807 aa11.15□□□□□ -0.62
YSR3YKR053C FMP10P40098 244 aa11.15□□□□□ -0.62
YSR3YKR053C ISM1P48526 1002 aa11.15□□□□□ -0.62
YSR3YKR053C SHE10P53075 577 aa11.15□□□□□ -0.62
YSR3YKR053C TAM41P53230 385 aa11.15□□□□□ -0.62
YSR3YKR053C YDL057WQ07379 328 aa11.15□□□□□ -0.62
YSR3YKR053C YMR084WA2P2R3 262 aa11.14□□□□□ -0.63
YSR3YKR053C COX4P04037 155 aa11.14□□□□□ -0.63
YSR3YKR053C MNN4P36044 1178 aa11.14□□□□□ -0.63
YSR3YKR053C VID30P53076 958 aa11.14□□□□□ -0.63
YSR3YKR053C ENV11P53246 860 aa11.14□□□□□ -0.63
YSR3YKR053C VTC3Q02725 835 aa11.14□□□□□ -0.63
YSR3YKR053C YDR090CQ03193 310 aa11.14□□□□□ -0.63
YSR3YKR053C PSR2Q07949 397 aa11.14□□□□□ -0.63
YSR3YKR053C YPL277CQ08989 487 aa11.14□□□□□ -0.63
YSR3YKR053C FKS1P38631 1876 aaKnown RBP11.14□□□□□ -0.63
YSR3YKR053C SSD1P24276 1250 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
YSR3YKR053C BIO2P32451 375 aa11.13□□□□□ -0.63
YSR3YKR053C ELM1P32801 640 aa11.13□□□□□ -0.63
YSR3YKR053C VID24P38263 362 aa11.13□□□□□ -0.63
YSR3YKR053C STB5P38699 743 aa11.13□□□□□ -0.63
YSR3YKR053C ADE4P04046 510 aaKnown RBP11.12□□□□□ -0.63
YSR3YKR053C CDC15P27636 974 aa11.12□□□□□ -0.63
YSR3YKR053C YFL034WP43564 1073 aa11.12□□□□□ -0.63
YSR3YKR053C INP52P50942 1183 aa11.12□□□□□ -0.63
YSR3YKR053C YNL034WP53963 612 aa11.12□□□□□ -0.63
YSR3YKR053C YNL018CP53976 612 aa11.12□□□□□ -0.63
YSR3YKR053C PHO8P11491 566 aa11.11□□□□□ -0.63
YSR3YKR053C URK1P27515 501 aa11.11□□□□□ -0.63
YSR3YKR053C YKT6P36015 200 aaKnown RBP11.11□□□□□ -0.63
YSR3YKR053C YGR130CP53278 816 aa11.11□□□□□ -0.63
YSR3YKR053C PNG1Q02890 363 aa11.11□□□□□ -0.63
YSR3YKR053C TRS130Q03660 1102 aa11.11□□□□□ -0.63
YSR3YKR053C CDC53Q12018 815 aaKnown RBP11.11□□□□□ -0.63
YSR3YKR053C YOR022CQ12204 715 aa11.11□□□□□ -0.63
YSR3YKR053C ZPS1Q12512 249 aa11.11□□□□□ -0.63
YSR3YKR053C PRC1P00729 532 aa11.1□□□□□ -0.63
YSR3YKR053C TOM70P07213 617 aaKnown RBP11.1□□□□□ -0.63
YSR3YKR053C RSA4P25382 515 aaKnown RBP11.1□□□□□ -0.63
YSR3YKR053C ADK2P26364 225 aa11.1□□□□□ -0.63
YSR3YKR053C SYN8P31377 255 aa11.1□□□□□ -0.63
YSR3YKR053C CSE2P33308 149 aa11.1□□□□□ -0.63
YSR3YKR053C MMS4P38257 691 aa11.1□□□□□ -0.63
YSR3YKR053C YHR131CP38835 850 aa11.1□□□□□ -0.63
YSR3YKR053C YHR202WP38887 602 aa11.1□□□□□ -0.63
YSR3YKR053C HUL4P40985 892 aa11.1□□□□□ -0.63
YSR3YKR053C YFL052WP43551 465 aa11.1□□□□□ -0.63
YSR3YKR053C NBP1P52919 319 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms