RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C NBL1Q3E7Y6 73 aa3.99□□□□□ -1.77
VPS53YJL029C FOB1O13329 566 aa3.99□□□□□ -1.77
VPS53YJL029C SRD1P09007 221 aa3.99□□□□□ -1.77
VPS53YJL029C RPL19AP0CX82 189 aaKnown RBP3.99□□□□□ -1.77
VPS53YJL029C RPL19BP0CX83 189 aaPredicted RBP3.99□□□□□ -1.77
VPS53YJL029C BUD16P39988 312 aa3.99□□□□□ -1.77
VPS53YJL029C THI6P41835 540 aa3.99□□□□□ -1.77
VPS53YJL029C CIT3P43635 486 aa3.99□□□□□ -1.77
VPS53YJL029C ISM1P48526 1002 aa3.99□□□□□ -1.77
VPS53YJL029C YGR130CP53278 816 aa3.99□□□□□ -1.77
VPS53YJL029C SEC5P89102 971 aa3.99□□□□□ -1.77
VPS53YJL029C SMD2Q06217 110 aaKnown RBP3.99□□□□□ -1.77
VPS53YJL029C YOR296WQ08748 1289 aa3.99□□□□□ -1.77
VPS53YJL029C OXR1Q08952 273 aa3.99□□□□□ -1.77
VPS53YJL029C MSD1P15179 658 aaKnown RBP3.98□□□□□ -1.77
VPS53YJL029C SYN8P31377 255 aa3.98□□□□□ -1.77
VPS53YJL029C VPS35P34110 944 aa3.98□□□□□ -1.77
VPS53YJL029C ORC6P38826 435 aa3.98□□□□□ -1.77
VPS53YJL029C DAK2P43550 591 aa3.98□□□□□ -1.77
VPS53YJL029C EPL1P43572 832 aa3.98□□□□□ -1.77
VPS53YJL029C CSN12P47130 423 aa3.98□□□□□ -1.77
VPS53YJL029C YGR153WP48238 217 aa3.98□□□□□ -1.77
VPS53YJL029C COQ9Q05779 260 aa3.98□□□□□ -1.77
VPS53YJL029C ILV1P00927 576 aaKnown RBP3.98□□□□□ -1.77
VPS53YJL029C RPL22AP05749 121 aaKnown RBP3.98□□□□□ -1.77
VPS53YJL029C SPT2P06843 333 aaPredicted RBP3.98□□□□□ -1.77
VPS53YJL029C CDC6P09119 513 aa3.98□□□□□ -1.77
VPS53YJL029C RPC31P17890 251 aa3.98□□□□□ -1.77
VPS53YJL029C ADE2P21264 571 aaKnown RBP3.98□□□□□ -1.77
VPS53YJL029C GSY1P23337 708 aa3.98□□□□□ -1.77
VPS53YJL029C TVP23P38962 199 aa3.98□□□□□ -1.77
VPS53YJL029C SLX8P40072 274 aa3.98□□□□□ -1.77
VPS53YJL029C BFA1P47113 574 aa3.98□□□□□ -1.77
VPS53YJL029C GIS4Q04233 774 aa3.98□□□□□ -1.77
VPS53YJL029C SMC6Q12749 1114 aa3.98□□□□□ -1.77
VPS53YJL029C HCA4P20448 770 aaKnown RBP3.97□□□□□ -1.77
VPS53YJL029C MRPL7P36519 292 aa3.97□□□□□ -1.77
VPS53YJL029C RFT1P38206 574 aaPredicted RBP3.97□□□□□ -1.77
VPS53YJL029C SLX1P38324 304 aa3.97□□□□□ -1.77
VPS53YJL029C CTR1P49573 406 aa3.97□□□□□ -1.77
VPS53YJL029C CTF18P49956 741 aa3.97□□□□□ -1.77
VPS53YJL029C SHE10P53075 577 aa3.97□□□□□ -1.77
VPS53YJL029C AIM33Q04516 312 aa3.97□□□□□ -1.77
VPS53YJL029C ECM7Q06200 448 aa3.97□□□□□ -1.77
VPS53YJL029C GPI13Q07830 1017 aa3.97□□□□□ -1.77
VPS53YJL029C DCS2Q12123 353 aa3.97□□□□□ -1.77
VPS53YJL029C AMS1P22855 1083 aa3.97□□□□□ -1.77
VPS53YJL029C COT1P32798 439 aa3.97□□□□□ -1.77
VPS53YJL029C STB5P38699 743 aa3.97□□□□□ -1.77
VPS53YJL029C MMF1P40185 145 aaKnown RBP3.97□□□□□ -1.77
VPS53YJL029C MET13P53128 600 aa3.97□□□□□ -1.77
VPS53YJL029C CAF130P53280 1122 aaPredicted RBP3.97□□□□□ -1.77
VPS53YJL029C TRS120Q04183 1289 aa3.97□□□□□ -1.77
VPS53YJL029C SVF1Q05515 481 aa3.97□□□□□ -1.77
VPS53YJL029C PCD1Q12524 340 aa3.97□□□□□ -1.77
VPS53YJL029C DED1P06634 604 aaKnown RBP3.96□□□□□ -1.78
VPS53YJL029C EAF5P39995 279 aa3.96□□□□□ -1.78
VPS53YJL029C BRE2P43132 505 aa3.96□□□□□ -1.78
VPS53YJL029C PEX14P53112 341 aa3.96□□□□□ -1.78
VPS53YJL029C HEH2Q03281 663 aa3.96□□□□□ -1.78
VPS53YJL029C HSP82P02829 709 aaKnown RBP3.96□□□□□ -1.78
VPS53YJL029C WHI2P12611 486 aa3.96□□□□□ -1.78
VPS53YJL029C BMH1P29311 267 aaKnown RBP3.96□□□□□ -1.78
VPS53YJL029C TMT1P32643 299 aa3.96□□□□□ -1.78
VPS53YJL029C OPT1P40897 799 aa3.96□□□□□ -1.78
VPS53YJL029C CUE3P53137 624 aaKnown RBP3.96□□□□□ -1.78
VPS53YJL029C YNR014WP53719 212 aa3.96□□□□□ -1.78
VPS53YJL029C YLR455WQ06188 304 aa3.96□□□□□ -1.78
VPS53YJL029C YDR461C-AQ2V2P7 80 aa3.96□□□□□ -1.78
VPS53YJL029C TAO3P40468 2376 aa3.95□□□□□ -1.78
VPS53YJL029C PCK1P10963 549 aa3.95□□□□□ -1.78
VPS53YJL029C FRS2P15625 503 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C RGR1P19263 1082 aa3.95□□□□□ -1.78
VPS53YJL029C VPS1P21576 704 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C RPC53P25441 422 aa3.95□□□□□ -1.78
VPS53YJL029C GBP2P25555 427 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
VPS53YJL029C ATG19P35193 415 aa3.95□□□□□ -1.78
VPS53YJL029C MRX3P38172 270 aa3.95□□□□□ -1.78
VPS53YJL029C RFC5P38251 354 aa3.95□□□□□ -1.78
VPS53YJL029C SAF1P38352 637 aa3.95□□□□□ -1.78
VPS53YJL029C ESL1P40456 1118 aa3.95□□□□□ -1.78
VPS53YJL029C HYR1P40581 163 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C GCV2P49095 1034 aa3.95□□□□□ -1.78
VPS53YJL029C PIL1P53252 339 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C CBK1P53894 756 aa3.95□□□□□ -1.78
VPS53YJL029C YNL134CP53912 376 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C NCS2P53923 493 aaPredicted RBP3.95□□□□□ -1.78
VPS53YJL029C MUK1Q02866 612 aa3.95□□□□□ -1.78
VPS53YJL029C MAG2Q06436 670 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C SDH5Q08230 162 aa3.95□□□□□ -1.78
VPS53YJL029C CPA2P03965 1118 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C SKG6P32900 734 aaPredicted RBP3.95□□□□□ -1.78
VPS53YJL029C RPT1P33299 467 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C DID4P36108 232 aa3.95□□□□□ -1.78
VPS53YJL029C APN2P38207 520 aa3.95□□□□□ -1.78
VPS53YJL029C SIP3P38717 1229 aa3.95□□□□□ -1.78
VPS53YJL029C RPN3P40016 523 aaKnown RBP3.95□□□□□ -1.78
VPS53YJL029C OYE3P41816 400 aaPredicted RBP3.95□□□□□ -1.78
VPS53YJL029C VTC2P43585 828 aa3.95□□□□□ -1.78
VPS53YJL029C YJL045WP47052 634 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms