RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W DAP1Q12091 152 aa7.25□□□□□ -1.25
PRE3YJL001W MAS2P11914 482 aa7.24□□□□□ -1.25
PRE3YJL001W ATE1P16639 503 aa7.24□□□□□ -1.25
PRE3YJL001W HXT5P38695 592 aa7.24□□□□□ -1.25
PRE3YJL001W NDT80P38830 627 aa7.24□□□□□ -1.25
PRE3YJL001W VPS45P38932 577 aa7.24□□□□□ -1.25
PRE3YJL001W TRS120Q04183 1289 aa7.24□□□□□ -1.25
PRE3YJL001W BRE1Q07457 700 aaKnown RBP7.24□□□□□ -1.25
PRE3YJL001W RKM4Q12504 494 aa7.24□□□□□ -1.25
PRE3YJL001W ANP1P32629 500 aa7.23□□□□□ -1.25
PRE3YJL001W MSC2Q03455 724 aa7.23□□□□□ -1.25
PRE3YJL001W MET32Q12041 191 aa7.23□□□□□ -1.25
PRE3YJL001W APC11Q12157 165 aa7.23□□□□□ -1.25
PRE3YJL001W ATG11Q12527 1178 aa7.23□□□□□ -1.25
PRE3YJL001W CDC16P09798 840 aa7.22□□□□□ -1.25
PRE3YJL001W MRPL33P20084 86 aa7.22□□□□□ -1.25
PRE3YJL001W SRP54P20424 541 aaKnown RBP7.22□□□□□ -1.25
PRE3YJL001W RPB10P22139 70 aa7.22□□□□□ -1.25
PRE3YJL001W AFT1P22149 690 aa7.22□□□□□ -1.25
PRE3YJL001W RPL8BP29453 256 aaKnown RBP7.22□□□□□ -1.25
PRE3YJL001W MET4P32389 672 aa7.22□□□□□ -1.25
PRE3YJL001W SCD5P34758 872 aa7.22□□□□□ -1.25
PRE3YJL001W MGE1P38523 228 aa7.22□□□□□ -1.25
PRE3YJL001W TVP23P38962 199 aa7.22□□□□□ -1.25
PRE3YJL001W RPS7BP48164 190 aaKnown RBP7.22□□□□□ -1.25
PRE3YJL001W LIF1P53150 421 aa7.22□□□□□ -1.25
PRE3YJL001W HDA1P53973 706 aa7.22□□□□□ -1.25
PRE3YJL001W PTA1Q01329 785 aaPredicted RBP7.22□□□□□ -1.25
PRE3YJL001W ESF1Q06344 628 aaKnown RBP7.22□□□□□ -1.25
PRE3YJL001W RIF1P29539 1916 aa7.22□□□□□ -1.25
PRE3YJL001W TY1B-AO13527 1196 aaKnown RBP7.21□□□□□ -1.26
PRE3YJL001W FMS1P50264 508 aa7.21□□□□□ -1.26
PRE3YJL001W RPT6Q01939 405 aaKnown RBP7.21□□□□□ -1.26
PRE3YJL001W YPL062WQ02781 134 aa7.21□□□□□ -1.26
PRE3YJL001W EMI2Q04409 500 aaKnown RBP7.21□□□□□ -1.26
PRE3YJL001W IRA2P19158 3079 aa7.21□□□□□ -1.26
PRE3YJL001W SWI6P09959 803 aa7.2□□□□□ -1.26
PRE3YJL001W INP51P40559 946 aaKnown RBP7.2□□□□□ -1.26
PRE3YJL001W ALA1P40825 983 aaKnown RBP7.2□□□□□ -1.26
PRE3YJL001W SUT1P53032 299 aaKnown RBP7.2□□□□□ -1.26
PRE3YJL001W LSB1P53281 241 aa7.2□□□□□ -1.26
PRE3YJL001W HST3P53687 447 aa7.2□□□□□ -1.26
PRE3YJL001W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
PRE3YJL001W MYO5Q04439 1219 aaKnown RBP7.2□□□□□ -1.26
PRE3YJL001W CLF1Q12309 687 aaPredicted RBP7.2□□□□□ -1.26
PRE3YJL001W KIN82P25341 720 aa7.19□□□□□ -1.26
PRE3YJL001W UGA4P32837 571 aa7.19□□□□□ -1.26
PRE3YJL001W ALD5P40047 520 aaKnown RBP7.19□□□□□ -1.26
PRE3YJL001W YGR035CP53222 116 aa7.19□□□□□ -1.26
PRE3YJL001W FKS1P38631 1876 aaKnown RBP7.18□□□□□ -1.26
PRE3YJL001W GAR1P28007 205 aaKnown RBP7.18□□□□□ -1.26
PRE3YJL001W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
PRE3YJL001W FMP10P40098 244 aa7.18□□□□□ -1.26
PRE3YJL001W CSM2P40465 213 aa7.18□□□□□ -1.26
PRE3YJL001W SPO74P45819 413 aa7.18□□□□□ -1.26
PRE3YJL001W INP52P50942 1183 aa7.18□□□□□ -1.26
PRE3YJL001W YNL034WP53963 612 aa7.18□□□□□ -1.26
PRE3YJL001W YNL018CP53976 612 aa7.18□□□□□ -1.26
PRE3YJL001W OYE2Q03558 400 aaKnown RBP7.18□□□□□ -1.26
PRE3YJL001W SSF2Q12153 453 aaPredicted RBP7.18□□□□□ -1.26
PRE3YJL001W AIM44Q99299 758 aa7.18□□□□□ -1.26
PRE3YJL001W MAK31P23059 88 aa7.17□□□□□ -1.26
PRE3YJL001W URK1P27515 501 aa7.17□□□□□ -1.26
PRE3YJL001W MET22P32179 357 aa7.17□□□□□ -1.26
PRE3YJL001W RDH54P38086 958 aa7.17□□□□□ -1.26
PRE3YJL001W OYE3P41816 400 aaPredicted RBP7.17□□□□□ -1.26
PRE3YJL001W VID30P53076 958 aa7.17□□□□□ -1.26
PRE3YJL001W GPI13Q07830 1017 aa7.17□□□□□ -1.26
PRE3YJL001W YLL058WQ12198 575 aa7.17□□□□□ -1.26
PRE3YJL001W Q0182Q9ZZW1 134 aa7.17□□□□□ -1.26
PRE3YJL001W POL3P15436 1097 aa7.16□□□□□ -1.26
PRE3YJL001W IDI1P15496 288 aa7.16□□□□□ -1.26
PRE3YJL001W VMA3P25515 160 aa7.16□□□□□ -1.26
PRE3YJL001W GBP2P25555 427 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
PRE3YJL001W FUB1P25659 250 aa7.16□□□□□ -1.26
PRE3YJL001W RER2P35196 286 aa7.16□□□□□ -1.26
PRE3YJL001W CRG1P38892 291 aaRIP-Chip data7.16□□□□□ -1.26not detected
PRE3YJL001W AAD14P42884 376 aa7.16□□□□□ -1.26
PRE3YJL001W MET13P53128 600 aa7.16□□□□□ -1.26
PRE3YJL001W MDM1Q01846 1127 aa7.16□□□□□ -1.26
PRE3YJL001W SPN1Q06505 410 aaPredicted RBP7.16□□□□□ -1.26
PRE3YJL001W MNL2Q12205 849 aa7.16□□□□□ -1.26
PRE3YJL001W RFC1P38630 861 aaKnown RBP7.15□□□□□ -1.26
PRE3YJL001W STB5P38699 743 aa7.15□□□□□ -1.26
PRE3YJL001W HXT8P40886 569 aa7.15□□□□□ -1.26
PRE3YJL001W UBP15P50101 1230 aa7.15□□□□□ -1.26
PRE3YJL001W SKY1Q03656 742 aa7.15□□□□□ -1.26
PRE3YJL001W SVF1Q05515 481 aa7.15□□□□□ -1.26
PRE3YJL001W RIM20Q12033 661 aa7.15□□□□□ -1.26
PRE3YJL001W STB3Q12427 513 aa7.15□□□□□ -1.26
PRE3YJL001W SMC1P32908 1225 aa7.14□□□□□ -1.27
PRE3YJL001W SSN3P39073 555 aa7.14□□□□□ -1.27
PRE3YJL001W YNL165WP53891 406 aa7.14□□□□□ -1.27
PRE3YJL001W CUS1Q02554 436 aaPredicted RBP7.14□□□□□ -1.27
PRE3YJL001W HEH2Q03281 663 aa7.14□□□□□ -1.27
PRE3YJL001W FMP27Q06179 2628 aa7.14□□□□□ -1.27
PRE3YJL001W TFC6Q06339 672 aa7.14□□□□□ -1.27
PRE3YJL001W VIP1Q06685 1146 aaKnown RBP7.14□□□□□ -1.27
PRE3YJL001W DSE3Q08729 430 aa7.14□□□□□ -1.27
PRE3YJL001W PHO4P07270 312 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms