RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W BIM1P40013 344 aa8.15□□□□□ -1.11
PEX28YHR150W PGA2P53903 129 aa8.15□□□□□ -1.11
PEX28YHR150W MFM1Q02783 413 aa8.15□□□□□ -1.11
PEX28YHR150W VTI1Q04338 217 aa8.15□□□□□ -1.11
PEX28YHR150W SDH5Q08230 162 aa8.15□□□□□ -1.11
PEX28YHR150W YPL225WQ08971 146 aaKnown RBP8.15□□□□□ -1.11
PEX28YHR150W YKR023WP36119 530 aaKnown RBP8.14□□□□□ -1.11
PEX28YHR150W ISW1P38144 1129 aa8.14□□□□□ -1.11
PEX28YHR150W SIP3P38717 1229 aa8.14□□□□□ -1.11
PEX28YHR150W PAN5P38787 379 aa8.14□□□□□ -1.11
PEX28YHR150W MMM1P41800 426 aa8.14□□□□□ -1.11
PEX28YHR150W GUP1P53154 560 aa8.14□□□□□ -1.11
PEX28YHR150W STE23Q06010 1027 aa8.14□□□□□ -1.11
PEX28YHR150W MAK16P10962 306 aaPredicted RBP8.13□□□□□ -1.11
PEX28YHR150W DAL7P21826 554 aa8.13□□□□□ -1.11
PEX28YHR150W APL1P27351 700 aa8.13□□□□□ -1.11
PEX28YHR150W RTG2P32608 588 aaKnown RBP8.13□□□□□ -1.11
PEX28YHR150W RIM101P33400 625 aa8.13□□□□□ -1.11
PEX28YHR150W LAS1P36146 502 aaPredicted RBP8.13□□□□□ -1.11
PEX28YHR150W UBP5P39944 805 aa8.13□□□□□ -1.11
PEX28YHR150W YPR078CQ06813 372 aa8.13□□□□□ -1.11
PEX28YHR150W SUB2Q07478 446 aaKnown RBP8.13□□□□□ -1.11
PEX28YHR150W GSC2P40989 1895 aa8.13□□□□□ -1.11
PEX28YHR150W OLA1P38219 394 aaKnown RBP8.12□□□□□ -1.11
PEX28YHR150W PIH1P38768 344 aa8.12□□□□□ -1.11
PEX28YHR150W YFL034WP43564 1073 aa8.12□□□□□ -1.11
PEX28YHR150W BTN2P53286 410 aa8.12□□□□□ -1.11
PEX28YHR150W DIG1Q03063 452 aaKnown RBP8.12□□□□□ -1.11
PEX28YHR150W OYE2Q03558 400 aaKnown RBP8.12□□□□□ -1.11
PEX28YHR150W MLH2Q07980 695 aa8.12□□□□□ -1.11
PEX28YHR150W ARP6Q12509 438 aa8.12□□□□□ -1.11
PEX28YHR150W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
PEX28YHR150W ERG11P10614 530 aa8.12□□□□□ -1.11
PEX28YHR150W GCG1P32656 232 aaKnown RBP8.12□□□□□ -1.11
PEX28YHR150W TDA3P38758 523 aa8.12□□□□□ -1.11
PEX28YHR150W TRS85P46944 698 aa8.12□□□□□ -1.11
PEX28YHR150W TOF1P53840 1238 aa8.12□□□□□ -1.11
PEX28YHR150W PEX29Q03370 554 aa8.12□□□□□ -1.11
PEX28YHR150W YML037CQ03703 340 aa8.12□□□□□ -1.11
PEX28YHR150W UTP14Q04500 899 aaKnown RBP8.12□□□□□ -1.11
PEX28YHR150W SVF1Q05515 481 aa8.12□□□□□ -1.11
PEX28YHR150W YDL057WQ07379 328 aa8.12□□□□□ -1.11
PEX28YHR150W APL5Q08951 932 aaKnown RBP8.12□□□□□ -1.11
PEX28YHR150W ZRT2Q12436 422 aa8.12□□□□□ -1.11
PEX28YHR150W RAD18P10862 487 aa8.11□□□□□ -1.11
PEX28YHR150W TRK2P28584 889 aa8.11□□□□□ -1.11
PEX28YHR150W PHO88P38264 188 aaPredicted RBP8.11□□□□□ -1.11
PEX28YHR150W SPP381P38282 291 aaPredicted RBP8.11□□□□□ -1.11
PEX28YHR150W NBP1P52919 319 aaPredicted RBP8.11□□□□□ -1.11
PEX28YHR150W TCO89Q08921 799 aa8.11□□□□□ -1.11
PEX28YHR150W CSR2Q12734 1121 aa8.11□□□□□ -1.11
PEX28YHR150W SAM1P10659 382 aaKnown RBP8.1□□□□□ -1.11
PEX28YHR150W PFK1P16861 987 aaKnown RBP8.1□□□□□ -1.11
PEX28YHR150W SEC8P32855 1065 aa8.1□□□□□ -1.11
PEX28YHR150W ROG3P43602 733 aa8.1□□□□□ -1.11
PEX28YHR150W KAP114P53067 1004 aa8.1□□□□□ -1.11
PEX28YHR150W LIF1P53150 421 aa8.1□□□□□ -1.11
PEX28YHR150W ORC4P54791 529 aa8.1□□□□□ -1.11
PEX28YHR150W ARG4P04076 463 aaPredicted RBP8.09□□□□□ -1.11
PEX28YHR150W FBP1P09201 348 aa8.09□□□□□ -1.11
PEX28YHR150W SWE1P32944 819 aa8.09□□□□□ -1.11
PEX28YHR150W PGM1P33401 570 aaKnown RBP8.09□□□□□ -1.11
PEX28YHR150W ULP2P40537 1034 aaPredicted RBP8.09□□□□□ -1.11
PEX28YHR150W RPC17P47076 161 aa8.09□□□□□ -1.11
PEX28YHR150W DIP5P53388 608 aa8.09□□□□□ -1.11
PEX28YHR150W YNL035CP53962 389 aaKnown RBP8.09□□□□□ -1.11
PEX28YHR150W ECI1Q05871 280 aa8.09□□□□□ -1.11
PEX28YHR150W YLR278CQ05854 1341 aa8.09□□□□□ -1.11
PEX28YHR150W JIP3O13555 125 aa8.09□□□□□ -1.11
PEX28YHR150W SUP45P12385 437 aaKnown RBP8.09□□□□□ -1.11
PEX28YHR150W PRE10P21242 288 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
PEX28YHR150W KTR2P33550 425 aa8.09□□□□□ -1.11
PEX28YHR150W YKL023WP36103 277 aaKnown RBP8.09□□□□□ -1.11
PEX28YHR150W CCT2P39076 527 aaKnown RBP8.09□□□□□ -1.11
PEX28YHR150W VHR2P40041 505 aa8.09□□□□□ -1.11
PEX28YHR150W NUP82P40368 713 aa8.09□□□□□ -1.11
PEX28YHR150W YNL320WP42840 284 aa8.09□□□□□ -1.11
PEX28YHR150W SGM1P47166 707 aa8.09□□□□□ -1.11
PEX28YHR150W HUL5P53119 910 aa8.09□□□□□ -1.11
PEX28YHR150W CNM67P53865 581 aaKnown RBP8.09□□□□□ -1.11
PEX28YHR150W CLN3P13365 580 aa8.08□□□□□ -1.12
PEX28YHR150W UGA4P32837 571 aa8.08□□□□□ -1.12
PEX28YHR150W UBC6P33296 250 aaPredicted RBP8.08□□□□□ -1.12
PEX28YHR150W OCT1P35999 772 aa8.08□□□□□ -1.12
PEX28YHR150W RPN3P40016 523 aaKnown RBP8.08□□□□□ -1.12
PEX28YHR150W YJL007CP47080 104 aa8.08□□□□□ -1.12
PEX28YHR150W YGR021WP53212 290 aa8.08□□□□□ -1.12
PEX28YHR150W GIR2Q03768 265 aaPredicted RBP8.08□□□□□ -1.12
PEX28YHR150W CSR1Q06705 408 aaKnown RBP8.08□□□□□ -1.12
PEX28YHR150W FAL1Q12099 399 aaKnown RBP8.08□□□□□ -1.12
PEX28YHR150W MED1Q12321 566 aa8.08□□□□□ -1.12
PEX28YHR150W TRP2P00899 507 aaKnown RBP8.07□□□□□ -1.12
PEX28YHR150W PHR1P05066 565 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
PEX28YHR150W PRP16P15938 1071 aaPredicted RBP8.07□□□□□ -1.12
PEX28YHR150W MRF1P30775 413 aaPredicted RBP8.07□□□□□ -1.12
PEX28YHR150W SEC5P89102 971 aa8.07□□□□□ -1.12
PEX28YHR150W CWC15Q03772 175 aaKnown RBP8.07□□□□□ -1.12
PEX28YHR150W TMA64Q04600 565 aaKnown RBP8.07□□□□□ -1.12
PEX28YHR150W YDR338CQ05497 695 aa8.07□□□□□ -1.12
PEX28YHR150W TSR1Q07381 788 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms