RNA–Protein interactions for RNA: YHL038C

CBP2, Required for splicing of the group I intron bI5 of the COB pre-mRNA, yeastyeast

Gene CBP2, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBP2YHL038C NUG1P40010 520 aaKnown RBP3.8□□□□□ -1.8
CBP2YHL038C MXR1P40029 184 aa3.8□□□□□ -1.8
CBP2YHL038C ATG36P46983 293 aa3.8□□□□□ -1.8
CBP2YHL038C MAL11P53048 616 aa3.8□□□□□ -1.8
CBP2YHL038C SDA1P53313 767 aaKnown RBP3.8□□□□□ -1.8
CBP2YHL038C LCD1Q04377 747 aa3.8□□□□□ -1.8
CBP2YHL038C MDM12Q92328 271 aa3.8□□□□□ -1.8
CBP2YHL038C VBA3P25594 458 aa3.79□□□□□ -1.8
CBP2YHL038C SMY2P32909 740 aaKnown RBP3.79□□□□□ -1.8
CBP2YHL038C TSA1P34760 196 aaKnown RBP3.79□□□□□ -1.8
CBP2YHL038C FLR1P38124 548 aa3.79□□□□□ -1.8
CBP2YHL038C NMD3P38861 518 aaKnown RBP3.79□□□□□ -1.8
CBP2YHL038C THI73Q07904 523 aa3.79□□□□□ -1.8
CBP2YHL038C ACM1Q08981 209 aa3.79□□□□□ -1.8
CBP2YHL038C THS1P04801 734 aaKnown RBP3.79□□□□□ -1.8
CBP2YHL038C DBP2P24783 546 aaKnown RBP3.79□□□□□ -1.8
CBP2YHL038C MEF1P25039 761 aa3.79□□□□□ -1.8
CBP2YHL038C PRO1P32264 428 aa3.79□□□□□ -1.8
CBP2YHL038C GPT2P36148 743 aa3.79□□□□□ -1.8
CBP2YHL038C RPN3P40016 523 aaKnown RBP3.79□□□□□ -1.8
CBP2YHL038C YJL045WP47052 634 aa3.79□□□□□ -1.8
CBP2YHL038C FOL1P53848 824 aa3.79□□□□□ -1.8
CBP2YHL038C TPP1Q03796 238 aa3.79□□□□□ -1.8
CBP2YHL038C YOL057WQ08225 711 aa3.79□□□□□ -1.8
CBP2YHL038C FAP7Q12055 197 aaPredicted RBP3.79□□□□□ -1.8
CBP2YHL038C KOG1P38873 1557 aa3.78□□□□□ -1.8
CBP2YHL038C GCD1P09032 578 aaPredicted RBP3.78□□□□□ -1.8
CBP2YHL038C REC104P33323 182 aa3.78□□□□□ -1.8
CBP2YHL038C CCM1P48237 864 aaPredicted RBP3.78□□□□□ -1.8
CBP2YHL038C TNA1P53322 534 aa3.78□□□□□ -1.8
CBP2YHL038C HOS3Q02959 697 aaKnown RBP3.78□□□□□ -1.8
CBP2YHL038C UME1Q03010 460 aa3.78□□□□□ -1.8
CBP2YHL038C GSF2Q04697 403 aaKnown RBP3.78□□□□□ -1.8
CBP2YHL038C CDC12P32468 407 aaKnown RBP3.77□□□□□ -1.81
CBP2YHL038C TOK1P40310 691 aa3.77□□□□□ -1.81
CBP2YHL038C YFR016CP43597 1233 aaKnown RBP3.77□□□□□ -1.81
CBP2YHL038C COQ4O13525 335 aa3.77□□□□□ -1.81
CBP2YHL038C RAD18P10862 487 aa3.77□□□□□ -1.81
CBP2YHL038C UGA2P38067 497 aa3.77□□□□□ -1.81
CBP2YHL038C PAF1P38351 445 aa3.77□□□□□ -1.81
CBP2YHL038C NIT3P49954 291 aa3.77□□□□□ -1.81
CBP2YHL038C PUS7Q08647 676 aaKnown RBP3.77□□□□□ -1.81
CBP2YHL038C TMA17Q12513 150 aa3.77□□□□□ -1.81
CBP2YHL038C RPS4AP0CX35 261 aaKnown RBP3.76□□□□□ -1.81
CBP2YHL038C RPS4BP0CX36 261 aaKnown RBP3.76□□□□□ -1.81
CBP2YHL038C YSC84P32793 468 aa3.76□□□□□ -1.81
CBP2YHL038C SLA2P33338 968 aa3.76□□□□□ -1.81
CBP2YHL038C SPC29P33419 253 aa3.76□□□□□ -1.81
CBP2YHL038C TPM2P40414 161 aa3.76□□□□□ -1.81
CBP2YHL038C DAM1P53267 343 aa3.76□□□□□ -1.81
CBP2YHL038C NCE103P53615 221 aa3.76□□□□□ -1.81
CBP2YHL038C HRQ1Q05549 1077 aa3.76□□□□□ -1.81
CBP2YHL038C SGS1P35187 1447 aa3.76□□□□□ -1.81
CBP2YHL038C CDC9P04819 755 aa3.75□□□□□ -1.81
CBP2YHL038C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
CBP2YHL038C TYS1P36421 394 aaKnown RBP3.75□□□□□ -1.81
CBP2YHL038C BAP2P38084 609 aa3.75□□□□□ -1.81
CBP2YHL038C CCZ1P38273 704 aa3.75□□□□□ -1.81
CBP2YHL038C SEC26P41810 973 aaKnown RBP3.75□□□□□ -1.81
CBP2YHL038C HFD1Q04458 532 aa3.75□□□□□ -1.81
CBP2YHL038C SRD1P09007 221 aa3.75□□□□□ -1.81
CBP2YHL038C STO1P34160 861 aaKnown RBP3.75□□□□□ -1.81
CBP2YHL038C ERT1P38140 529 aa3.75□□□□□ -1.81
CBP2YHL038C YBR238CP38330 731 aaKnown RBP3.75□□□□□ -1.81
CBP2YHL038C YDR514CQ04408 483 aa3.75□□□□□ -1.81
CBP2YHL038C YPR196WQ06595 470 aa3.75□□□□□ -1.81
CBP2YHL038C YLR001CQ07895 862 aa3.75□□□□□ -1.81
CBP2YHL038C NPP1P25353 742 aa3.74□□□□□ -1.81
CBP2YHL038C YEL1P34225 687 aa3.74□□□□□ -1.81
CBP2YHL038C ALT1P52893 592 aa3.74□□□□□ -1.81
CBP2YHL038C YGR283CP53336 341 aaPredicted RBP3.74□□□□□ -1.81
CBP2YHL038C RSB1Q08417 382 aa3.74□□□□□ -1.81
CBP2YHL038C CDC48P25694 835 aaKnown RBP3.73□□□□□ -1.81
CBP2YHL038C EMC3P36039 253 aa3.73□□□□□ -1.81
CBP2YHL038C YKL151CP36059 337 aa3.73□□□□□ -1.81
CBP2YHL038C YKR078WP36158 585 aaKnown RBP3.73□□□□□ -1.81
CBP2YHL038C YER158CP40095 573 aa3.73□□□□□ -1.81
CBP2YHL038C MGS1P40151 587 aa3.73□□□□□ -1.81
CBP2YHL038C YFL054CP43549 646 aa3.73□□□□□ -1.81
CBP2YHL038C GYP8P43570 497 aa3.73□□□□□ -1.81
CBP2YHL038C GYP7P48365 746 aa3.73□□□□□ -1.81
CBP2YHL038C BUL2Q03758 920 aaKnown RBP3.73□□□□□ -1.81
CBP2YHL038C RSC3Q06639 885 aa3.73□□□□□ -1.81
CBP2YHL038C MDM38Q08179 573 aa3.73□□□□□ -1.81
CBP2YHL038C MET7Q08645 548 aa3.73□□□□□ -1.81
CBP2YHL038C YLL058WQ12198 575 aa3.73□□□□□ -1.81
CBP2YHL038C TMA7Q3E764 64 aaKnown RBP3.73□□□□□ -1.81
CBP2YHL038C BI4P03879 638 aa3.73□□□□□ -1.81
CBP2YHL038C PRP6P19735 899 aaPredicted RBP3.73□□□□□ -1.81
CBP2YHL038C SFL1P20134 766 aa3.73□□□□□ -1.81
CBP2YHL038C AFR1P33304 620 aa3.73□□□□□ -1.81
CBP2YHL038C MTC2P34246 357 aa3.73□□□□□ -1.81
CBP2YHL038C YHL012WP38709 493 aa3.73□□□□□ -1.81
CBP2YHL038C PIK1P39104 1066 aa3.73□□□□□ -1.81
CBP2YHL038C YJR120WP47157 116 aa3.73□□□□□ -1.81
CBP2YHL038C MET13P53128 600 aa3.73□□□□□ -1.81
CBP2YHL038C SUB1P54000 292 aaKnown RBP3.73□□□□□ -1.81
CBP2YHL038C REH1Q06709 432 aa3.73□□□□□ -1.81
CBP2YHL038C GUD1Q07729 489 aa3.73□□□□□ -1.81
CBP2YHL038C NBA1Q08229 501 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 143.6 ms