RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C RIF1P29539 1916 aa5.12□□□□□ -1.59
PXR1YGR280C DAL5P15365 543 aa5.11□□□□□ -1.59
PXR1YGR280C CCL1P37366 393 aa5.11□□□□□ -1.59
PXR1YGR280C LEU5P38702 357 aa5.11□□□□□ -1.59
PXR1YGR280C YHL050CP38721 697 aa5.11□□□□□ -1.59
PXR1YGR280C MED6P38782 295 aa5.11□□□□□ -1.59
PXR1YGR280C YER158CP40095 573 aa5.11□□□□□ -1.59
PXR1YGR280C RSM26P47141 266 aa5.11□□□□□ -1.59
PXR1YGR280C ISM1P48526 1002 aa5.11□□□□□ -1.59
PXR1YGR280C LSB1P53281 241 aa5.11□□□□□ -1.59
PXR1YGR280C FOL1P53848 824 aa5.11□□□□□ -1.59
PXR1YGR280C VPS30Q02948 557 aa5.11□□□□□ -1.59
PXR1YGR280C UBC1P21734 215 aaKnown RBP5.1□□□□□ -1.59
PXR1YGR280C PEX34P25584 144 aa5.1□□□□□ -1.59
PXR1YGR280C PEX2P32800 271 aa5.1□□□□□ -1.59
PXR1YGR280C CSE2P33308 149 aa5.1□□□□□ -1.59
PXR1YGR280C NDT80P38830 627 aa5.1□□□□□ -1.59
PXR1YGR280C RRP8P38961 392 aaKnown RBP5.1□□□□□ -1.59
PXR1YGR280C HMF1P40037 129 aaKnown RBP5.1□□□□□ -1.59
PXR1YGR280C LSB6P42951 607 aa5.1□□□□□ -1.59
PXR1YGR280C FMS1P50264 508 aa5.1□□□□□ -1.59
PXR1YGR280C TMN2Q04562 672 aa5.1□□□□□ -1.59
PXR1YGR280C OSH2Q12451 1283 aa5.1□□□□□ -1.59
PXR1YGR280C RAD27P26793 382 aa5.09□□□□□ -1.59
PXR1YGR280C TRK2P28584 889 aa5.09□□□□□ -1.59
PXR1YGR280C NUD1P32336 851 aa5.09□□□□□ -1.59
PXR1YGR280C SFP1P32432 683 aa5.09□□□□□ -1.59
PXR1YGR280C TVP38P36164 337 aa5.09□□□□□ -1.59
PXR1YGR280C YHL026CP38740 315 aa5.09□□□□□ -1.59
PXR1YGR280C YMR147WP40218 223 aaKnown RBP5.09□□□□□ -1.59
PXR1YGR280C LSB3P43603 459 aaKnown RBP5.09□□□□□ -1.59
PXR1YGR280C MDR1P53258 950 aa5.09□□□□□ -1.59
PXR1YGR280C PCD1Q12524 340 aa5.09□□□□□ -1.59
PXR1YGR280C LAA1P39526 2014 aa5.09□□□□□ -1.6
PXR1YGR280C PCF11P39081 626 aaPredicted RBP5.08□□□□□ -1.6
PXR1YGR280C GIP4P39732 760 aa5.08□□□□□ -1.6
PXR1YGR280C YPP1P46951 817 aa5.08□□□□□ -1.6
PXR1YGR280C CSL4P53859 292 aaPredicted RBP5.08□□□□□ -1.6
PXR1YGR280C YML083CQ04526 418 aa5.08□□□□□ -1.6
PXR1YGR280C MAS1P10507 462 aa5.07□□□□□ -1.6
PXR1YGR280C PRP9P19736 530 aaKnown RBP5.07□□□□□ -1.6
PXR1YGR280C PDE1P22434 369 aa5.07□□□□□ -1.6
PXR1YGR280C PRO3P32263 286 aaKnown RBP5.07□□□□□ -1.6
PXR1YGR280C SPT16P32558 1035 aaKnown RBP5.07□□□□□ -1.6
PXR1YGR280C CSE1P33307 960 aa5.07□□□□□ -1.6
PXR1YGR280C MIC60P36112 540 aa5.07□□□□□ -1.6
PXR1YGR280C RFC1P38630 861 aaKnown RBP5.07□□□□□ -1.6
PXR1YGR280C YEL025CP39991 1188 aa5.07□□□□□ -1.6
PXR1YGR280C GYP8P43570 497 aa5.07□□□□□ -1.6
PXR1YGR280C ACF4P47129 309 aa5.07□□□□□ -1.6
PXR1YGR280C YGR130CP53278 816 aa5.07□□□□□ -1.6
PXR1YGR280C HED1Q03937 162 aa5.07□□□□□ -1.6
PXR1YGR280C CSI1Q04368 295 aa5.07□□□□□ -1.6
PXR1YGR280C PDH1Q12428 516 aaKnown RBP5.07□□□□□ -1.6
PXR1YGR280C MEC1P38111 2368 aa5.07□□□□□ -1.6
PXR1YGR280C SES1P07284 462 aaKnown RBP5.06□□□□□ -1.6
PXR1YGR280C NUC1P08466 329 aa5.06□□□□□ -1.6
PXR1YGR280C HSF1P10961 833 aa5.06□□□□□ -1.6
PXR1YGR280C PWP2P25635 923 aaKnown RBP5.06□□□□□ -1.6
PXR1YGR280C RME1P32338 300 aaKnown RBP5.06□□□□□ -1.6
PXR1YGR280C TCD2P36101 447 aaKnown RBP5.06□□□□□ -1.6
PXR1YGR280C POL12P38121 705 aaPredicted RBP5.06□□□□□ -1.6
PXR1YGR280C UBX7P38349 436 aa5.06□□□□□ -1.6
PXR1YGR280C SPO1P53541 631 aa5.06□□□□□ -1.6
PXR1YGR280C OPT2Q06593 877 aa5.06□□□□□ -1.6
PXR1YGR280C FMP25Q08023 583 aa5.06□□□□□ -1.6
PXR1YGR280C YDL206WQ12424 762 aa5.06□□□□□ -1.6
PXR1YGR280C TY1A-DR4O74302 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-HP0C2I4 478 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C TY1A-AP0CX57 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-PR1P0CX58 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-ORP0CX59 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-PR2P0CX60 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-DR5P0CX65 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-ER2P0CX66 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-GR3P0CX67 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-LR1P0CX68 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-MR2P0CX69 440 aa5.05□□□□□ -1.6
PXR1YGR280C RPL8BP29453 256 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C YBR238CP38330 731 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C SBE2P42223 864 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C TY1A-JR2P47099 440 aa5.05□□□□□ -1.6
PXR1YGR280C ENT3P47160 408 aa5.05□□□□□ -1.6
PXR1YGR280C NRD1P53617 575 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
PXR1YGR280C IMP4P53941 290 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C TY1A-DR1Q03856 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-ML1Q04706 440 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C ESC8Q08119 714 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-BRQ12217 440 aa5.05□□□□□ -1.6
PXR1YGR280C PKH2Q12236 1081 aaKnown RBP5.05□□□□□ -1.6
PXR1YGR280C TY1A-NL2Q12470 440 aa5.05□□□□□ -1.6
PXR1YGR280C TY1A-GR2Q12485 440 aa5.05□□□□□ -1.6
PXR1YGR280C RLF2Q12495 606 aa5.05□□□□□ -1.6
PXR1YGR280C NCB2Q92317 146 aa5.05□□□□□ -1.6
PXR1YGR280C MPD2Q99316 277 aa5.05□□□□□ -1.6
PXR1YGR280C RIT1P23796 513 aa5.04□□□□□ -1.6
PXR1YGR280C PGS1P25578 521 aa5.04□□□□□ -1.6
PXR1YGR280C NEM1P38757 446 aa5.04□□□□□ -1.6
PXR1YGR280C DUG1P43616 481 aaKnown RBP5.04□□□□□ -1.6
PXR1YGR280C JIP5Q06214 492 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 184.9 ms