RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSC2	YGR244C	RPS6B	P0CX38	236 aa	Predicted RBP	10.85	□□□□□ -0.67
LSC2	YGR244C	PHO8	P11491	566 aa		10.85	□□□□□ -0.67
LSC2	YGR244C	PHO13	P19881	312 aa		10.85	□□□□□ -0.67
LSC2	YGR244C	ETP1	P38748	585 aa	Known RBP	10.85	□□□□□ -0.67
LSC2	YGR244C	RTT107	P38850	1070 aa		10.85	□□□□□ -0.67
LSC2	YGR244C	MXR1	P40029	184 aa		10.85	□□□□□ -0.67
LSC2	YGR244C	PSP2	P50109	593 aa	Known RBP	10.85	□□□□□ -0.67
LSC2	YGR244C	YDL057W	Q07379	328 aa		10.85	□□□□□ -0.67
LSC2	YGR244C	TCO89	Q08921	799 aa		10.85	□□□□□ -0.67
LSC2	YGR244C	SPO11	P23179	398 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.84	□□□□□ -0.67	not detected
LSC2	YGR244C	APL1	P27351	700 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	SMC3	P47037	1230 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	COS5	P47187	383 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	CUR1	Q06469	252 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	PLP2	Q12017	286 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	ATG9	Q12142	997 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	OSW2	Q12202	724 aa		10.84	□□□□□ -0.67
LSC2	YGR244C	SSB1	P11484	613 aa	Known RBP	10.83	□□□□□ -0.68
LSC2	YGR244C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	10.83	□□□□□ -0.68	not detected
LSC2	YGR244C	YSC83	P32792	385 aa		10.83	□□□□□ -0.68
LSC2	YGR244C	DBP7	P36120	742 aa	Known RBP	10.83	□□□□□ -0.68
LSC2	YGR244C	PGM2	P37012	569 aa	Known RBP	10.83	□□□□□ -0.68
LSC2	YGR244C	EFM2	P38347	419 aa		10.83	□□□□□ -0.68
LSC2	YGR244C	EAF5	P39995	279 aa		10.83	□□□□□ -0.68
LSC2	YGR244C	SSB2	P40150	613 aa	Known RBP	10.83	□□□□□ -0.68
LSC2	YGR244C	RPS7B	P48164	190 aa	Known RBP	10.83	□□□□□ -0.68
LSC2	YGR244C	YMR321C	Q04898	105 aa		10.83	□□□□□ -0.68
LSC2	YGR244C	MLH2	Q07980	695 aa		10.83	□□□□□ -0.68
LSC2	YGR244C	NCR1	Q12200	1170 aa		10.83	□□□□□ -0.68
LSC2	YGR244C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	10.82	□□□□□ -0.68	not detected
LSC2	YGR244C	RRP43	P25359	394 aa	Predicted RBP	10.82	□□□□□ -0.68
LSC2	YGR244C	YUR1	P26725	428 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	TRK2	P28584	889 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	TIM23	P32897	222 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	NIP100	P33420	868 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	SMC2	P38989	1170 aa	Known RBP	10.82	□□□□□ -0.68
LSC2	YGR244C	ARK1	P53974	638 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	CTR9	P89105	1077 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	APL4	Q12028	832 aa		10.82	□□□□□ -0.68
LSC2	YGR244C	CWC2	Q12046	339 aa	Predicted RBP	10.82	□□□□□ -0.68
LSC2	YGR244C	DED1	P06634	604 aa	Known RBP	10.81	□□□□□ -0.68
LSC2	YGR244C	CHS2	P14180	963 aa		10.81	□□□□□ -0.68
LSC2	YGR244C	IRE1	P32361	1115 aa		10.81	□□□□□ -0.68
LSC2	YGR244C	COT1	P32798	439 aa		10.81	□□□□□ -0.68
LSC2	YGR244C	XRS2	P33301	854 aa		10.81	□□□□□ -0.68
LSC2	YGR244C	GPT2	P36148	743 aa		10.81	□□□□□ -0.68
LSC2	YGR244C	STU2	P46675	888 aa		10.81	□□□□□ -0.68
LSC2	YGR244C	YEL1	P34225	687 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	SHM1	P37292	490 aa	Predicted RBP	10.8	□□□□□ -0.68
LSC2	YGR244C	ERC1	P38767	581 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	YAP5	P40574	245 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	AVT1	P47082	602 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.8	□□□□□ -0.68	not detected
LSC2	YGR244C	STR2	P47164	639 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	RTT102	P53330	157 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	UME1	Q03010	460 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	UTP5	Q04177	643 aa	Known RBP	10.8	□□□□□ -0.68
LSC2	YGR244C	VPS38	Q05919	439 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	OPY2	Q06810	360 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	YOL098C	Q12496	1037 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	SRF1	Q12516	437 aa		10.8	□□□□□ -0.68
LSC2	YGR244C	MAS2	P11914	482 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	POX1	P13711	748 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	NAM7	P30771	971 aa	Known RBP	10.79	□□□□□ -0.68
LSC2	YGR244C	SMC1	P32908	1225 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	CAJ1	P39101	391 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	VFA1	P40080	203 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	ACF4	P47129	309 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	ROD1	Q02805	837 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	YPR078C	Q06813	372 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	RLP24	Q07915	199 aa	Known RBP	10.79	□□□□□ -0.68
LSC2	YGR244C	HMI1	Q12039	706 aa		10.79	□□□□□ -0.68
LSC2	YGR244C	TPO2	P53283	614 aa		10.78	□□□□□ -0.68
LSC2	YGR244C	TIM8	P57744	87 aa		10.78	□□□□□ -0.68
LSC2	YGR244C	COQ9	Q05779	260 aa		10.78	□□□□□ -0.68
LSC2	YGR244C	HIF1	Q12373	385 aa		10.78	□□□□□ -0.68
LSC2	YGR244C	UBC1	P21734	215 aa	Known RBP	10.77	□□□□□ -0.69
LSC2	YGR244C	MUD1	P32605	298 aa	Known RBP	10.77	□□□□□ -0.69
LSC2	YGR244C	KTR2	P33550	425 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	PCH2	P38126	564 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	UBP5	P39944	805 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	PSF2	P40359	213 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	HFM1	P51979	1187 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	TAM41	P53230	385 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	CAF130	P53280	1122 aa	Predicted RBP	10.77	□□□□□ -0.69
LSC2	YGR244C	DUS1	P53759	423 aa	Known RBP	10.77	□□□□□ -0.69
LSC2	YGR244C	ICL2	Q12031	575 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	HFI1	Q12060	488 aa		10.77	□□□□□ -0.69
LSC2	YGR244C	MTF2	P10849	440 aa		10.76	□□□□□ -0.69
LSC2	YGR244C	SPO12	P17123	173 aa		10.76	□□□□□ -0.69
LSC2	YGR244C	PET123	P17558	318 aa		10.76	□□□□□ -0.69
LSC2	YGR244C	EFT1	P32324	842 aa	Known RBP	10.76	□□□□□ -0.69
LSC2	YGR244C	RME1	P32338	300 aa	Known RBP	10.76	□□□□□ -0.69
LSC2	YGR244C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.76	□□□□□ -0.69	not detected
LSC2	YGR244C	YKL023W	P36103	277 aa	Known RBP	10.76	□□□□□ -0.69
LSC2	YGR244C	GUA1	P38625	525 aa	Known RBP	10.76	□□□□□ -0.69
LSC2	YGR244C	ATG3	P40344	310 aa		10.76	□□□□□ -0.69
LSC2	YGR244C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.76	□□□□□ -0.69	RIP-Chip
LSC2	YGR244C	YJR107W	P47145	328 aa		10.76	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms