RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	GPG1	P53130	126 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	GYP1	Q08484	637 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	SSK22	P25390	1331 aa	Predicted RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	FUR1	P18562	216 aa	Known RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PFK1	YGR240C	DAL1	P32375	460 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	EFM2	P38347	419 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	SPT8	P38915	602 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	PSY2	P40164	858 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	YGR153W	P48238	217 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	FOL2	P51601	243 aa	Known RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	DSD1	P53095	428 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	TFB2	Q02939	513 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	GIC2	Q06648	383 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	OPY2	Q06810	360 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	LSP1	Q12230	341 aa	Known RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	RME1	P32338	300 aa	Known RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	HSP78	P33416	811 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	MIC60	P36112	540 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	SPF1	P39986	1215 aa	Known RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	SEC5	P89102	971 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	UME1	Q03010	460 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	HEH2	Q03281	663 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	ARP9	Q05123	467 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	ADE13	Q05911	482 aa	Known RBP	4.8	□□□□□ -1.64
PFK1	YGR240C	THI73	Q07904	523 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	YOR352W	Q08816	343 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	YVC1	Q12324	675 aa		4.8	□□□□□ -1.64
PFK1	YGR240C	MRP7	P12687	371 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	PRI2	P20457	528 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	AKL1	P38080	1108 aa	Known RBP	4.79	□□□□□ -1.64
PFK1	YGR240C	CNN1	P43618	361 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	SAM37	P50110	327 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	FDC1	Q03034	503 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	HOT1	Q03213	719 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	YLR287C	Q05881	355 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	YOL036W	Q08206	761 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	RRG1	Q12167	365 aa	Predicted RBP	4.79	□□□□□ -1.64
PFK1	YGR240C	BRR1	Q99177	341 aa	Predicted RBP	4.79	□□□□□ -1.64
PFK1	YGR240C	DHR2	P36009	735 aa	Predicted RBP	4.79	□□□□□ -1.64
PFK1	YGR240C	YFR006W	P43590	535 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	MDE1	P47095	244 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	NUP84	P52891	726 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	VPS30	Q02948	557 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	ESC2	Q06340	456 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	ATG20	Q07528	640 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	GPI13	Q07830	1017 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	GAS4	Q08271	471 aa		4.79	□□□□□ -1.64
PFK1	YGR240C	FAP7	Q12055	197 aa	Predicted RBP	4.79	□□□□□ -1.64
PFK1	YGR240C	ORC2	P32833	620 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	PPQ1	P32945	549 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	NTH2	P35172	780 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	EAP1	P36041	632 aa	Known RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	YHL041W	P38730	149 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	YJL070C	P40361	888 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	FYV8	P46949	817 aa	Known RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	MSB3	P48566	633 aa	Predicted RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	YGR122W	P53272	402 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	PAP2	P53632	584 aa	Known RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	YPR097W	Q06839	1073 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	HSH49	Q99181	213 aa	Predicted RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	TFC4	P33339	1025 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	YPP1	P46951	817 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	RNR4	P49723	345 aa	Known RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	YGR125W	P53273	1036 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	HST2	P53686	357 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	JJJ1	P53863	590 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	MRD1	Q06106	887 aa	Known RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	MCP2	Q06567	569 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	CUE5	Q08412	411 aa	Known RBP	4.78	□□□□□ -1.64
PFK1	YGR240C	YIL002W-A	Q3E7Z5	69 aa		4.78	□□□□□ -1.64
PFK1	YGR240C	UTP10	P42945	1769 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	CYC8	P14922	966 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	NAM7	P30771	971 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	TEF4	P36008	412 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	PRP42	Q03776	544 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	OPI10	Q08202	246 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	TRE2	Q08693	809 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	ENT1	Q12518	454 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	YBL111C	Q3E7Y5	667 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	TRP2	P00899	507 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	CAN1	P04817	590 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	THR4	P16120	514 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	ESS1	P22696	170 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	LYP1	P32487	611 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	SFA1	P32771	386 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	NIC96	P34077	839 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	GGA2	P38817	585 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	ZIM17	P42844	174 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	FAA4	P47912	694 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	MEP3	P53390	489 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	RTC4	P53850	401 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	RRN5	Q02983	363 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	YMR018W	Q04364	514 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	MLC2	Q06580	163 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	ARR2	Q06597	130 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	RTT109	Q07794	436 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	MLH2	Q07980	695 aa		4.77	□□□□□ -1.65
PFK1	YGR240C	ROM2	P51862	1356 aa	Known RBP	4.77	□□□□□ -1.65
PFK1	YGR240C	PHO87	P25360	923 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms