RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX1	YGR193C	GLE1	Q12315	538 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	RRI2	Q12348	645 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	TAD3	Q9URQ3	322 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	CYC1	P00044	109 aa	Predicted RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	SUP35	P05453	685 aa	Known RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	CDC31	P06704	161 aa	Known RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	TOM70	P07213	617 aa	Known RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	PHO4	P07270	312 aa	Known RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	NAT1	P12945	854 aa	Known RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	APN1	P22936	367 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	ADD66	P36040	267 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	RKM3	P38222	552 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	ATG14	P38270	344 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	APE4	P38821	490 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	LAM1	P38851	1228 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	TAT2	P38967	592 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PDX1	YGR193C	CAJ1	P39101	391 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	MEF2	P39677	819 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	VPS53	P47061	822 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	SRB7	P47822	140 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	HNT2	P49775	206 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	YGL140C	P53120	1219 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	RPN4	Q03465	531 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	PLB2	Q03674	706 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	ATG16	Q03818	150 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	RKM2	Q03942	479 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	RPN7	Q06103	429 aa	Known RBP	4.09	□□□□□ -1.75
PDX1	YGR193C	SPO21	Q12411	609 aa		4.09	□□□□□ -1.75
PDX1	YGR193C	INH1	P01097	85 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	CMP2	P14747	604 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	ACE2	P21192	770 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	KIP1	P28742	1111 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	IME2	P32581	645 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	YKL100C	P34248	587 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PDX1	YGR193C	RRP8	P38961	392 aa	Known RBP	4.08	□□□□□ -1.76
PDX1	YGR193C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PDX1	YGR193C	RSC8	P43609	557 aa	Known RBP	4.08	□□□□□ -1.76
PDX1	YGR193C	YJL049W	P47048	450 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	CWC21	Q03375	135 aa	Known RBP	4.08	□□□□□ -1.76
PDX1	YGR193C	ROT1	Q03691	256 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	RRB1	Q04225	511 aa	Known RBP	4.08	□□□□□ -1.76
PDX1	YGR193C	YLR352W	Q06479	807 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	IRC3	Q06683	689 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	VIP1	Q06685	1146 aa	Known RBP	4.08	□□□□□ -1.76
PDX1	YGR193C	MDM38	Q08179	573 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	NBA1	Q08229	501 aa	Known RBP	4.08	□□□□□ -1.76
PDX1	YGR193C	PNS1	Q12412	539 aa		4.08	□□□□□ -1.76
PDX1	YGR193C	COQ4	O13525	335 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	MTC2	P34246	357 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	RXT2	P38255	430 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	PAF1	P38351	445 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	DOT6	P40059	670 aa	Known RBP	4.07	□□□□□ -1.76
PDX1	YGR193C	DAK2	P43550	591 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	IOC3	P43596	787 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	DSL1	P53847	754 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	SPC19	Q03954	165 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	SPO20	Q04359	397 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	DUS4	Q06063	367 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	YLH47	Q06493	454 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	MSC6	Q08818	692 aa	Known RBP	4.07	□□□□□ -1.76
PDX1	YGR193C	PCL8	Q08966	492 aa		4.07	□□□□□ -1.76
PDX1	YGR193C	HOM3	P10869	527 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	RED1	P14291	827 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PDX1	YGR193C	KAR2	P16474	682 aa	Known RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	KAR3	P17119	729 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	TPM1	P17536	199 aa	Known RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	SNF5	P18480	905 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	AAD3	P25612	363 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	SMY1	P32364	656 aa	Known RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	APL2	P36000	726 aa	Predicted RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	BAP2	P38084	609 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	YHL050C	P38721	697 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	YHR219W	P38900	624 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	MNN1	P39106	762 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	SWD1	P39706	426 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	MXR1	P40029	184 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	VID27	P40157	782 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	BUD6	P41697	788 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	POL32	P47110	350 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	YJR142W	P47173	342 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	CCM1	P48237	864 aa	Predicted RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	YGR016W	P53209	190 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	YPL109C	Q02981	657 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	ESF1	Q06344	628 aa	Known RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	ISA1	Q07821	250 aa	Predicted RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	CLP1	Q08685	445 aa	Predicted RBP	4.06	□□□□□ -1.76
PDX1	YGR193C	YOR378W	Q08902	515 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	YPL191C	Q08930	360 aa		4.06	□□□□□ -1.76
PDX1	YGR193C	SEC23	P15303	768 aa	Known RBP	4.05	□□□□□ -1.76
PDX1	YGR193C	PET123	P17558	318 aa		4.05	□□□□□ -1.76
PDX1	YGR193C	CLN1	P20437	546 aa		4.05	□□□□□ -1.76
PDX1	YGR193C	RAD27	P26793	382 aa		4.05	□□□□□ -1.76
PDX1	YGR193C	MET4	P32389	672 aa		4.05	□□□□□ -1.76
PDX1	YGR193C	VPH1	P32563	840 aa	Known RBP	4.05	□□□□□ -1.76
PDX1	YGR193C	DOM34	P33309	386 aa		4.05	□□□□□ -1.76
PDX1	YGR193C	VPS35	P34110	944 aa		4.05	□□□□□ -1.76
PDX1	YGR193C	STO1	P34160	861 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms