RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C PHO92Q06390 306 aa5.22□□□□□ -1.57
SEC9YGR009C NOP6Q07623 225 aaKnown RBP5.22□□□□□ -1.57
SEC9YGR009C YDR056CQ12025 205 aa5.22□□□□□ -1.57
SEC9YGR009C SCM3Q12334 223 aa5.22□□□□□ -1.57
SEC9YGR009C ARG81P05085 880 aa5.21□□□□□ -1.58
SEC9YGR009C PHO8P11491 566 aa5.21□□□□□ -1.58
SEC9YGR009C LCB1P25045 558 aaKnown RBP5.21□□□□□ -1.58
SEC9YGR009C NAM7P30771 971 aaKnown RBP5.21□□□□□ -1.58
SEC9YGR009C MCM10P32354 571 aa5.21□□□□□ -1.58
SEC9YGR009C MRP4P32902 394 aa5.21□□□□□ -1.58
SEC9YGR009C AFR1P33304 620 aa5.21□□□□□ -1.58
SEC9YGR009C LHS1P36016 881 aa5.21□□□□□ -1.58
SEC9YGR009C PKP1P40530 394 aa5.21□□□□□ -1.58
SEC9YGR009C LOC1P43586 204 aaPredicted RBP5.21□□□□□ -1.58
SEC9YGR009C YPP1P46951 817 aa5.21□□□□□ -1.58
SEC9YGR009C SNX4P47057 423 aa5.21□□□□□ -1.58
SEC9YGR009C PIP2P52960 996 aa5.21□□□□□ -1.58
SEC9YGR009C RNT1Q02555 471 aa5.21□□□□□ -1.58
SEC9YGR009C GYP1Q08484 637 aa5.21□□□□□ -1.58
SEC9YGR009C CHS3P29465 1165 aa5.2□□□□□ -1.58
SEC9YGR009C LYP1P32487 611 aa5.2□□□□□ -1.58
SEC9YGR009C NIP1P32497 812 aaKnown RBP5.2□□□□□ -1.58
SEC9YGR009C STV1P37296 890 aa5.2□□□□□ -1.58
SEC9YGR009C NEO1P40527 1151 aa5.2□□□□□ -1.58
SEC9YGR009C ROK1P45818 564 aaPredicted RBP5.2□□□□□ -1.58
SEC9YGR009C AIP1P46680 615 aaKnown RBP5.2□□□□□ -1.58
SEC9YGR009C FYV8P46949 817 aaKnown RBP5.2□□□□□ -1.58
SEC9YGR009C ENT3P47160 408 aa5.2□□□□□ -1.58
SEC9YGR009C INP2Q03824 705 aa5.2□□□□□ -1.58
SEC9YGR009C ARO80Q04052 950 aa5.2□□□□□ -1.58
SEC9YGR009C PUT4P15380 627 aa5.2□□□□□ -1.58
SEC9YGR009C TIM23P32897 222 aa5.2□□□□□ -1.58
SEC9YGR009C DOM34P33309 386 aa5.2□□□□□ -1.58
SEC9YGR009C CUE2P36075 443 aaKnown RBP5.2□□□□□ -1.58
SEC9YGR009C RRM3P38766 723 aa5.2□□□□□ -1.58
SEC9YGR009C RLP7P40693 322 aaKnown RBP5.2□□□□□ -1.58
SEC9YGR009C UBP15P50101 1230 aa5.2□□□□□ -1.58
SEC9YGR009C YNL193WP53870 558 aa5.2□□□□□ -1.58
SEC9YGR009C RPM2Q02773 1202 aa5.2□□□□□ -1.58
SEC9YGR009C PRP42Q03776 544 aaKnown RBP5.2□□□□□ -1.58
SEC9YGR009C APL4Q12028 832 aa5.2□□□□□ -1.58
SEC9YGR009C YLR125WQ12138 136 aa5.2□□□□□ -1.58
SEC9YGR009C SES1P07284 462 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C ILS1P09436 1072 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C HAP4P14064 554 aa5.19□□□□□ -1.58
SEC9YGR009C HSP60P19882 572 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C PRP28P23394 588 aa5.19□□□□□ -1.58
SEC9YGR009C PRP22P24384 1145 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C BMH1P29311 267 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C UGA2P38067 497 aa5.19□□□□□ -1.58
SEC9YGR009C YRO2P38079 344 aa5.19□□□□□ -1.58
SEC9YGR009C PBY1P38254 753 aa5.19□□□□□ -1.58
SEC9YGR009C CCZ1P38273 704 aa5.19□□□□□ -1.58
SEC9YGR009C MSG5P38590 489 aa5.19□□□□□ -1.58
SEC9YGR009C RFC1P38630 861 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C OSH3P38713 996 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C VPS45P38932 577 aa5.19□□□□□ -1.58
SEC9YGR009C YJR061WP40355 935 aa5.19□□□□□ -1.58
SEC9YGR009C GCN20P43535 752 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C YFL066CP43538 392 aa5.19□□□□□ -1.58
SEC9YGR009C APS3P47064 194 aa5.19□□□□□ -1.58
SEC9YGR009C RET3P53600 189 aa5.19□□□□□ -1.58
SEC9YGR009C IVY1Q04934 453 aa5.19□□□□□ -1.58
SEC9YGR009C CUE5Q08412 411 aaKnown RBP5.19□□□□□ -1.58
SEC9YGR009C SSP2Q08646 371 aa5.19□□□□□ -1.58
SEC9YGR009C RPN2P32565 945 aaKnown RBP5.18□□□□□ -1.58
SEC9YGR009C DUR3P33413 735 aa5.18□□□□□ -1.58
SEC9YGR009C FTH1P38310 465 aa5.18□□□□□ -1.58
SEC9YGR009C SRP72P38688 640 aaKnown RBP5.18□□□□□ -1.58
SEC9YGR009C THI12P42883 340 aa5.18□□□□□ -1.58
SEC9YGR009C THI5P43534 340 aa5.18□□□□□ -1.58
SEC9YGR009C SPO74P45819 413 aa5.18□□□□□ -1.58
SEC9YGR009C CSN12P47130 423 aa5.18□□□□□ -1.58
SEC9YGR009C THI11P47183 340 aa5.18□□□□□ -1.58
SEC9YGR009C LYS4P49367 693 aaPredicted RBP5.18□□□□□ -1.58
SEC9YGR009C RNR4P49723 345 aaKnown RBP5.18□□□□□ -1.58
SEC9YGR009C PSD2P53037 1138 aaKnown RBP5.18□□□□□ -1.58
SEC9YGR009C RPN14P53196 417 aa5.18□□□□□ -1.58
SEC9YGR009C YNR063WP53749 607 aa5.18□□□□□ -1.58
SEC9YGR009C THI13Q07748 340 aa5.18□□□□□ -1.58
SEC9YGR009C ADR1P07248 1323 aa5.18□□□□□ -1.58
SEC9YGR009C STE3P06783 470 aa5.18□□□□□ -1.58
SEC9YGR009C DOA4P32571 926 aa5.18□□□□□ -1.58
SEC9YGR009C UBC6P33296 250 aaPredicted RBP5.18□□□□□ -1.58
SEC9YGR009C FYV10P40492 516 aa5.18□□□□□ -1.58
SEC9YGR009C MKT1P40850 830 aaKnown RBP5.18□□□□□ -1.58
SEC9YGR009C SKP2P42843 763 aa5.18□□□□□ -1.58
SEC9YGR009C BNA6P43619 295 aa5.18□□□□□ -1.58
SEC9YGR009C MTO1P53070 669 aa5.18□□□□□ -1.58
SEC9YGR009C MED4Q12343 284 aa5.18□□□□□ -1.58
SEC9YGR009C AHC1Q12433 566 aa5.18□□□□□ -1.58
SEC9YGR009C STE6P12866 1290 aa5.17□□□□□ -1.58
SEC9YGR009C RPL8AP17076 256 aaKnown RBP5.17□□□□□ -1.58
SEC9YGR009C YAP1P19880 650 aaKnown RBP5.17□□□□□ -1.58
SEC9YGR009C CLN2P20438 545 aa5.17□□□□□ -1.58
SEC9YGR009C HCA4P20448 770 aaKnown RBP5.17□□□□□ -1.58
SEC9YGR009C MRPL8P22353 238 aa5.17□□□□□ -1.58
SEC9YGR009C VPH2P32341 215 aa5.17□□□□□ -1.58
SEC9YGR009C YME2P32843 850 aa5.17□□□□□ -1.58
SEC9YGR009C VPS17P32913 551 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms