RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	HRQ1	Q05549	1077 aa		4	□□□□□ -1.77
ECO1	YFR027W	SGD1	Q06132	899 aa		4	□□□□□ -1.77
ECO1	YFR027W	MDM38	Q08179	573 aa		4	□□□□□ -1.77
ECO1	YFR027W	WRS1	Q12109	432 aa	Known RBP	4	□□□□□ -1.77
ECO1	YFR027W	SMC4	Q12267	1418 aa		4	□□□□□ -1.77
ECO1	YFR027W	MYO4	P32492	1471 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	YPK9	Q12697	1472 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	IRC20	Q06554	1556 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	PET111	P08468	800 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	SRM1	P21827	482 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	APL1	P27351	700 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	CDC12	P32468	407 aa	Known RBP	3.99	□□□□□ -1.77
ECO1	YFR027W	STE5	P32917	917 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	LAM1	P38851	1228 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	YJL049W	P47048	450 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	NNF2	P53253	936 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	MSC2	Q03455	724 aa		3.99	□□□□□ -1.77
ECO1	YFR027W	GAL10	P04397	699 aa		3.98	□□□□□ -1.77
ECO1	YFR027W	CMP2	P14747	604 aa		3.98	□□□□□ -1.77
ECO1	YFR027W	SRP54	P20424	541 aa	Known RBP	3.98	□□□□□ -1.77
ECO1	YFR027W	GRX1	P25373	110 aa	Known RBP	3.98	□□□□□ -1.77
ECO1	YFR027W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
ECO1	YFR027W	AIM3	P38266	947 aa	Known RBP	3.98	□□□□□ -1.77
ECO1	YFR027W	MEF2	P39677	819 aa		3.98	□□□□□ -1.77
ECO1	YFR027W	SRP1	Q02821	542 aa	Known RBP	3.98	□□□□□ -1.77
ECO1	YFR027W	NAN1	Q02931	896 aa	Known RBP	3.98	□□□□□ -1.77
ECO1	YFR027W	PRP3	Q03338	469 aa	Predicted RBP	3.98	□□□□□ -1.77
ECO1	YFR027W	YPL277C	Q08989	487 aa		3.98	□□□□□ -1.77
ECO1	YFR027W	THO2	P53552	1597 aa	Known RBP	3.97	□□□□□ -1.77
ECO1	YFR027W	RPS13	P05756	151 aa	Known RBP	3.97	□□□□□ -1.77
ECO1	YFR027W	FUN30	P31380	1131 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	LTV1	P34078	463 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	YBR184W	P38299	523 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	SIC1	P38634	284 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	GIC1	P38785	314 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	YAP1801	P38856	637 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	SAH1	P39954	449 aa	Known RBP	3.97	□□□□□ -1.77
ECO1	YFR027W	SIT1	P39980	628 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	RAD26	P40352	1085 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	PFD1	P46988	109 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	SRT1	Q03175	343 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	GCN5	Q03330	439 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	PLB2	Q03674	706 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	DUS3	Q06053	668 aa	Known RBP	3.97	□□□□□ -1.77
ECO1	YFR027W	DUS4	Q06063	367 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	FMP25	Q08023	583 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	YOR352W	Q08816	343 aa		3.97	□□□□□ -1.77
ECO1	YFR027W	TOP1	P04786	769 aa		3.96	□□□□□ -1.78
ECO1	YFR027W	PRP9	P19736	530 aa	Known RBP	3.96	□□□□□ -1.78
ECO1	YFR027W	YKR078W	P36158	585 aa	Known RBP	3.96	□□□□□ -1.78
ECO1	YFR027W	GYP7	P48365	746 aa		3.96	□□□□□ -1.78
ECO1	YFR027W	PBP1	P53297	722 aa	Known RBP	3.96	□□□□□ -1.78
ECO1	YFR027W	YSH1	Q06224	779 aa	Predicted RBP	3.96	□□□□□ -1.78
ECO1	YFR027W	RLP24	Q07915	199 aa	Known RBP	3.96	□□□□□ -1.78
ECO1	YFR027W	XYL2	Q07993	356 aa		3.96	□□□□□ -1.78
ECO1	YFR027W	SSM4	P40318	1319 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	CDC6	P09119	513 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	RPC82	P32349	654 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	SCT1	P32784	759 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	DOM34	P33309	386 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	NPP2	P39997	493 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	DSN1	P40568	576 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	UTP8	P53276	713 aa	Known RBP	3.95	□□□□□ -1.78
ECO1	YFR027W	TPO2	P53283	614 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	ROT1	Q03691	256 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	YDR306C	Q06640	478 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
ECO1	YFR027W	OSW2	Q12202	724 aa		3.95	□□□□□ -1.78
ECO1	YFR027W	PDR10	P51533	1564 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	RAD4	P14736	754 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
ECO1	YFR027W	RPL8B	P29453	256 aa	Known RBP	3.94	□□□□□ -1.78
ECO1	YFR027W	SWI3	P32591	825 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	HBS1	P32769	611 aa	Known RBP	3.94	□□□□□ -1.78
ECO1	YFR027W	AFR1	P33304	620 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	ECM21	P38167	1117 aa	Known RBP	3.94	□□□□□ -1.78
ECO1	YFR027W	YBR238C	P38330	731 aa	Known RBP	3.94	□□□□□ -1.78
ECO1	YFR027W	TSL1	P38427	1098 aa	Known RBP	3.94	□□□□□ -1.78
ECO1	YFR027W	TCD1	P38756	429 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	MND2	P40577	368 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	NNF1	P47149	201 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	SPO75	Q07798	868 aa		3.94	□□□□□ -1.78
ECO1	YFR027W	ETT1	Q08421	412 aa	Known RBP	3.94	□□□□□ -1.78
ECO1	YFR027W	PPH3	P32345	308 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	AAR2	P32357	355 aa	Predicted RBP	3.93	□□□□□ -1.78
ECO1	YFR027W	TOD6	P34219	525 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	VPS24	P36095	224 aa	Known RBP	3.93	□□□□□ -1.78
ECO1	YFR027W	YER158C	P40095	573 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	YKE2	P52553	114 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	ERP6	P53198	216 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	VPS62	P53285	467 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	TLG1	Q03322	224 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	BUL2	Q03758	920 aa	Known RBP	3.93	□□□□□ -1.78
ECO1	YFR027W	RPN7	Q06103	429 aa	Known RBP	3.93	□□□□□ -1.78
ECO1	YFR027W	CDA1	Q06702	301 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	RXT3	Q07458	294 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	ADY3	Q07732	790 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	HMI1	Q12039	706 aa		3.93	□□□□□ -1.78
ECO1	YFR027W	NOP14	Q99207	810 aa	Known RBP	3.93	□□□□□ -1.78
ECO1	YFR027W	ADE8	P04161	214 aa		3.92	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms