RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C RAD53P22216 821 aa4.49□□□□□ -1.69
VAB2YEL005C SLA2P33338 968 aa4.49□□□□□ -1.69
VAB2YEL005C NMD2P38798 1089 aaKnown RBP4.49□□□□□ -1.69
VAB2YEL005C NUP82P40368 713 aa4.49□□□□□ -1.69
VAB2YEL005C RRT14P40470 206 aa4.49□□□□□ -1.69
VAB2YEL005C SEC26P41810 973 aaKnown RBP4.49□□□□□ -1.69
VAB2YEL005C YFL054CP43549 646 aa4.49□□□□□ -1.69
VAB2YEL005C GUS1P46655 708 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
VAB2YEL005C ENV11P53246 860 aa4.49□□□□□ -1.69
VAB2YEL005C RNH70P53331 553 aa4.49□□□□□ -1.69
VAB2YEL005C YPR196WQ06595 470 aa4.49□□□□□ -1.69
VAB2YEL005C RCL1Q08096 367 aaPredicted RBP4.49□□□□□ -1.69
VAB2YEL005C BI4P03879 638 aa4.48□□□□□ -1.69
VAB2YEL005C CAN1P04817 590 aa4.48□□□□□ -1.69
VAB2YEL005C PHO8P11491 566 aa4.48□□□□□ -1.69
VAB2YEL005C TIM23P32897 222 aa4.48□□□□□ -1.69
VAB2YEL005C DOM34P33309 386 aa4.48□□□□□ -1.69
VAB2YEL005C YBR284WP38150 797 aa4.48□□□□□ -1.69
VAB2YEL005C GCN5Q03330 439 aa4.48□□□□□ -1.69
VAB2YEL005C RSM24Q03976 319 aa4.48□□□□□ -1.69
VAB2YEL005C YLL058WQ12198 575 aa4.48□□□□□ -1.69
VAB2YEL005C CIT2P08679 460 aa4.47□□□□□ -1.69
VAB2YEL005C LAM1P38851 1228 aa4.47□□□□□ -1.69
VAB2YEL005C MEF2P39677 819 aa4.47□□□□□ -1.69
VAB2YEL005C SIT1P39980 628 aa4.47□□□□□ -1.69
VAB2YEL005C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
VAB2YEL005C TAF8Q03750 510 aa4.47□□□□□ -1.69
VAB2YEL005C LCD1Q04377 747 aa4.47□□□□□ -1.69
VAB2YEL005C POB3Q04636 552 aaKnown RBP4.47□□□□□ -1.69
VAB2YEL005C OSW2Q12202 724 aa4.47□□□□□ -1.69
VAB2YEL005C ACE2P21192 770 aa4.46□□□□□ -1.7
VAB2YEL005C HCM1P25364 564 aa4.46□□□□□ -1.7
VAB2YEL005C APL1P27351 700 aa4.46□□□□□ -1.7
VAB2YEL005C THI4P32318 326 aa4.46□□□□□ -1.7
VAB2YEL005C CDC12P32468 407 aaKnown RBP4.46□□□□□ -1.7
VAB2YEL005C HBS1P32769 611 aaKnown RBP4.46□□□□□ -1.7
VAB2YEL005C RRP14P36080 434 aaKnown RBP4.46□□□□□ -1.7
VAB2YEL005C CCM1P48237 864 aaPredicted RBP4.46□□□□□ -1.7
VAB2YEL005C CTF4Q01454 927 aa4.46□□□□□ -1.7
VAB2YEL005C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7 RIP-Chip
VAB2YEL005C HRQ1Q05549 1077 aa4.46□□□□□ -1.7
VAB2YEL005C SGD1Q06132 899 aa4.46□□□□□ -1.7
VAB2YEL005C MDM38Q08179 573 aa4.46□□□□□ -1.7
VAB2YEL005C YPR071WQ12346 211 aa4.46□□□□□ -1.7
VAB2YEL005C HBN1Q96VH4 193 aa4.46□□□□□ -1.7
VAB2YEL005C REC104P33323 182 aa4.45□□□□□ -1.7
VAB2YEL005C YER158CP40095 573 aa4.45□□□□□ -1.7
VAB2YEL005C BUD6P41697 788 aa4.45□□□□□ -1.7
VAB2YEL005C NIT3P49954 291 aa4.45□□□□□ -1.7
VAB2YEL005C ATG13Q06628 738 aa4.45□□□□□ -1.7
VAB2YEL005C CDC48P25694 835 aaKnown RBP4.44□□□□□ -1.7
VAB2YEL005C FUN30P31380 1131 aa4.44□□□□□ -1.7
VAB2YEL005C PET10P36139 283 aa4.44□□□□□ -1.7
VAB2YEL005C YKR078WP36158 585 aaKnown RBP4.44□□□□□ -1.7
VAB2YEL005C BRN1P38170 754 aa4.44□□□□□ -1.7
VAB2YEL005C HSV2P50079 448 aaPredicted RBP4.44□□□□□ -1.7
VAB2YEL005C ALG12P53730 551 aa4.44□□□□□ -1.7
VAB2YEL005C ERR1P0CX10 437 aa4.43□□□□□ -1.7
VAB2YEL005C ERR2P0CX11 437 aa4.43□□□□□ -1.7
VAB2YEL005C MSD1P15179 658 aaKnown RBP4.43□□□□□ -1.7
VAB2YEL005C RFA1P22336 621 aaKnown RBP4.43□□□□□ -1.7
VAB2YEL005C CHS7P38843 316 aa4.43□□□□□ -1.7
VAB2YEL005C FPR3P38911 411 aaKnown RBP4.43□□□□□ -1.7
VAB2YEL005C UBP6P43593 499 aaKnown RBP4.43□□□□□ -1.7
VAB2YEL005C VPS30Q02948 557 aa4.43□□□□□ -1.7
VAB2YEL005C SRT1Q03175 343 aa4.43□□□□□ -1.7
VAB2YEL005C PPM2Q08282 695 aa4.43□□□□□ -1.7
VAB2YEL005C TOP3P13099 656 aa4.42□□□□□ -1.7
VAB2YEL005C ENA1P13587 1091 aa4.42□□□□□ -1.7
VAB2YEL005C RPC82P32349 654 aa4.42□□□□□ -1.7
VAB2YEL005C BET3P36149 193 aa4.42□□□□□ -1.7
VAB2YEL005C AIM21P40563 679 aa4.42□□□□□ -1.7
VAB2YEL005C GYP7P48365 746 aa4.42□□□□□ -1.7
VAB2YEL005C PSP2P50109 593 aaKnown RBP4.42□□□□□ -1.7
VAB2YEL005C ENA2Q01896 1091 aa4.42□□□□□ -1.7
VAB2YEL005C ENA5Q12691 1091 aa4.42□□□□□ -1.7
VAB2YEL005C PHR1P05066 565 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
VAB2YEL005C GSY1P23337 708 aa4.41□□□□□ -1.7
VAB2YEL005C GIC1P38785 314 aa4.41□□□□□ -1.7
VAB2YEL005C TOK1P40310 691 aa4.41□□□□□ -1.7
VAB2YEL005C ALG2P43636 503 aa4.41□□□□□ -1.7
VAB2YEL005C HFM1P51979 1187 aa4.41□□□□□ -1.7
VAB2YEL005C RTA1P53047 317 aa4.41□□□□□ -1.7
VAB2YEL005C ROT1Q03691 256 aa4.41□□□□□ -1.7
VAB2YEL005C UTP14Q04500 899 aaKnown RBP4.41□□□□□ -1.7
VAB2YEL005C NTO1Q12311 748 aa4.41□□□□□ -1.7
VAB2YEL005C CYC1P00044 109 aaPredicted RBP4.4□□□□□ -1.71
VAB2YEL005C CMP2P14747 604 aa4.4□□□□□ -1.71
VAB2YEL005C SFP1P32432 683 aa4.4□□□□□ -1.71
VAB2YEL005C YKL151CP36059 337 aa4.4□□□□□ -1.71
VAB2YEL005C YAP1801P38856 637 aa4.4□□□□□ -1.71
VAB2YEL005C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
VAB2YEL005C RPS9AO13516 197 aaKnown RBP4.39□□□□□ -1.71
VAB2YEL005C RPP2AP05319 106 aaKnown RBP4.39□□□□□ -1.71
VAB2YEL005C NPP1P25353 742 aa4.39□□□□□ -1.71
VAB2YEL005C PMI40P29952 429 aaKnown RBP4.39□□□□□ -1.71
VAB2YEL005C SRP101P32916 621 aa4.39□□□□□ -1.71
VAB2YEL005C TSL1P38427 1098 aaKnown RBP4.39□□□□□ -1.71
VAB2YEL005C MNN1P39106 762 aa4.39□□□□□ -1.71
VAB2YEL005C DSS1P39112 969 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms