RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	TOK1	P40310	691 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	TED1	P40533	473 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	LCD1	Q04377	747 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	ADE8	P04161	214 aa		3.46	□□□□□ -1.86
TFB1	YDR311W	DAL3	P32459	195 aa		3.46	□□□□□ -1.86
TFB1	YDR311W	PGM1	P33401	570 aa	Known RBP	3.46	□□□□□ -1.86
TFB1	YDR311W	YKL151C	P36059	337 aa		3.46	□□□□□ -1.86
TFB1	YDR311W	YAR028W	P39548	234 aa		3.46	□□□□□ -1.86
TFB1	YDR311W	GCV1	P48015	400 aa		3.46	□□□□□ -1.86
TFB1	YDR311W	ARI1	P53111	347 aa	Known RBP	3.46	□□□□□ -1.86
TFB1	YDR311W	RSC3	Q06639	885 aa		3.46	□□□□□ -1.86
TFB1	YDR311W	GAL1	P04385	528 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	RET1	P22276	1149 aa	Known RBP	3.45	□□□□□ -1.86
TFB1	YDR311W	KIP1	P28742	1111 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	YKL222C	P35995	705 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	PCM1	P38628	557 aa	Known RBP	3.45	□□□□□ -1.86
TFB1	YDR311W	GPB2	P39717	880 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	POL5	P39985	1022 aa	Known RBP	3.45	□□□□□ -1.86
TFB1	YDR311W	CAF16	P43569	289 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	PIP2	P52960	996 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	AIM14	P53109	570 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	YGR045C	P53229	120 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	MET14	Q02196	202 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	LAP2	Q10740	671 aa		3.45	□□□□□ -1.86
TFB1	YDR311W	ERS1	P17261	260 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	CDC12	P32468	407 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	REC104	P33323	182 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	HSP78	P33416	811 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	YBR238C	P38330	731 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	QNS1	P38795	714 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	CKB2	P38930	258 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	ERP2	P39704	215 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	OAF1	P39720	1047 aa	Predicted RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	YFL054C	P43549	646 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	YGR283C	P53336	341 aa	Predicted RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	VMS1	Q04311	632 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	TMA64	Q04600	565 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	TY1A-NL1	Q12391	440 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	SPO21	Q12411	609 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	NKP1	Q12493	238 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	PGI1	P12709	554 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	YEL1	P34225	687 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	MCD4	P36051	919 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	NMD3	P38861	518 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	LEM3	P42838	414 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	VPS53	P47061	822 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	KIP3	P53086	805 aa	Known RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	YRB30	P53107	440 aa	Predicted RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	ELA1	P53861	379 aa	Predicted RBP	3.44	□□□□□ -1.86
TFB1	YDR311W	UBX4	P54730	416 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	HRQ1	Q05549	1077 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	AVO1	Q08236	1176 aa		3.44	□□□□□ -1.86
TFB1	YDR311W	APA1	P16550	321 aa	Known RBP	3.43	□□□□□ -1.86
TFB1	YDR311W	PER1	P25625	357 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	GPP2	P40106	250 aa	Known RBP	3.43	□□□□□ -1.86
TFB1	YDR311W	VID27	P40157	782 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	NIT2	P47016	307 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	SPC105	P53148	917 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.43	□□□□□ -1.86	not detected
TFB1	YDR311W	DSE4	P53753	1117 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	RSA3	Q05942	220 aa	Known RBP	3.43	□□□□□ -1.86
TFB1	YDR311W	ATG33	Q06485	197 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	GUD1	Q07729	489 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	YPL260W	Q08977	551 aa		3.43	□□□□□ -1.86
TFB1	YDR311W	YTM1	Q12024	460 aa	Predicted RBP	3.43	□□□□□ -1.86
TFB1	YDR311W	AEP2	P22136	580 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	SLA2	P33338	968 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	STO1	P34160	861 aa	Known RBP	3.42	□□□□□ -1.86
TFB1	YDR311W	DUG1	P43616	481 aa	Known RBP	3.42	□□□□□ -1.86
TFB1	YDR311W	NCE103	P53615	221 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	SRP1	Q02821	542 aa	Known RBP	3.42	□□□□□ -1.86
TFB1	YDR311W	ATP25	Q03153	612 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	YMR074C	Q04773	145 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	YDR338C	Q05497	695 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	MET7	Q08645	548 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	ENV7	Q12003	364 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	HMG1	P12683	1054 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	RSC6	P25632	483 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	DPB3	P27344	201 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	NIC96	P34077	839 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	TSL1	P38427	1098 aa	Known RBP	3.42	□□□□□ -1.86
TFB1	YDR311W	GZF3	P42944	551 aa	Known RBP	3.42	□□□□□ -1.86
TFB1	YDR311W	COG4	Q06096	861 aa		3.42	□□□□□ -1.86
TFB1	YDR311W	URN1	Q06525	465 aa	Known RBP	3.42	□□□□□ -1.86
TFB1	YDR311W	MIH1	P23748	554 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	PRO1	P32264	428 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	HOG1	P32485	435 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	EMC3	P36039	253 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	UGA2	P38067	497 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	NPP2	P39997	493 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	PBP1	P53297	722 aa	Known RBP	3.41	□□□□□ -1.86
TFB1	YDR311W	GUP2	Q08929	609 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	ACM1	Q08981	209 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	ELG1	Q12050	791 aa		3.41	□□□□□ -1.86
TFB1	YDR311W	PTP2	P29461	750 aa		3.4	□□□□□ -1.86
TFB1	YDR311W	HSE1	P38753	452 aa		3.4	□□□□□ -1.86
TFB1	YDR311W	RRP8	P38961	392 aa	Known RBP	3.4	□□□□□ -1.86
TFB1	YDR311W	AIM21	P40563	679 aa		3.4	□□□□□ -1.86
TFB1	YDR311W	RSC8	P43609	557 aa	Known RBP	3.4	□□□□□ -1.86
TFB1	YDR311W	CCM1	P48237	864 aa	Predicted RBP	3.4	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms