RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	PRE8	P23639	250 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	MSH3	P25336	1018 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	SEC65	P29478	273 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	DAL1	P32375	460 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	ASF1	P32447	279 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	YET1	P35723	206 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	SHM1	P37292	490 aa	Predicted RBP	5.23	□□□□□ -1.57
SUP35	YDR172W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
SUP35	YDR172W	VPS75	P53853	264 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	HOS3	Q02959	697 aa	Known RBP	5.23	□□□□□ -1.57
SUP35	YDR172W	HCR1	Q05775	265 aa	Known RBP	5.23	□□□□□ -1.57
SUP35	YDR172W	YOL075C	Q08234	1294 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	TIP41	Q12199	356 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	NOP58	Q12499	511 aa	Known RBP	5.23	□□□□□ -1.57
SUP35	YDR172W	RPL22A	P05749	121 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	SAM2	P19358	384 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	SRM1	P21827	482 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	RRP43	P25359	394 aa	Predicted RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	PSO2	P30620	661 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	HIR1	P32479	840 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	PXL1	P36166	706 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	ERG7	P38604	731 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	SUE1	Q06524	206 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	PCL8	Q08966	492 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	CDC37	P06101	506 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	HPR1	P17629	752 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	ADP1	P25371	1049 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	PET10	P36139	283 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	TOM71	P38825	639 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	SPT8	P38915	602 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	DAK2	P43550	591 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	UBA2	P52488	636 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	MTC3	P53077	123 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	SDA1	P53313	767 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	UBP2	Q01476	1272 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	EBS1	Q03466	884 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	GFD1	Q04839	188 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	YDL124W	Q07551	312 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	SLK19	Q08581	821 aa	Known RBP	5.22	□□□□□ -1.57
SUP35	YDR172W	TY1A-BL	Q12266	440 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	TY1A-DR3	Q12441	440 aa		5.22	□□□□□ -1.57
SUP35	YDR172W	THR4	P16120	514 aa	Known RBP	5.21	□□□□□ -1.58
SUP35	YDR172W	PHO13	P19881	312 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	MRC1	P25588	1096 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	YBL028C	P38202	106 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	CCT3	P39077	534 aa	Known RBP	5.21	□□□□□ -1.58
SUP35	YDR172W	FET4	P40988	552 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	CIT3	P43635	486 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	SNU71	P53207	620 aa	Known RBP	5.21	□□□□□ -1.58
SUP35	YDR172W	RTC4	P53850	401 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	ADY4	Q05955	493 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	SKG3	Q06315	1026 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	TLG2	Q08144	397 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	YPL216W	Q08964	1102 aa		5.21	□□□□□ -1.58
SUP35	YDR172W	CLF1	Q12309	687 aa	Predicted RBP	5.21	□□□□□ -1.58
SUP35	YDR172W	PMA1	P05030	918 aa	Known RBP	5.2	□□□□□ -1.58
SUP35	YDR172W	MCM1	P11746	286 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	VAN1	P23642	535 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	SUV3	P32580	737 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	NDT80	P38830	627 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	AIP1	P46680	615 aa	Known RBP	5.2	□□□□□ -1.58
SUP35	YDR172W	YGR153W	P48238	217 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	SCW11	P53189	542 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	RET3	P53600	189 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	DSE4	P53753	1117 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	SPP382	Q06411	708 aa	Predicted RBP	5.2	□□□□□ -1.58
SUP35	YDR172W	CDC19	P00549	500 aa	Known RBP	5.2	□□□□□ -1.58
SUP35	YDR172W	THS1	P04801	734 aa	Known RBP	5.2	□□□□□ -1.58
SUP35	YDR172W	SSA1	P10591	642 aa	Known RBP	5.2	□□□□□ -1.58
SUP35	YDR172W	SAP190	P36123	1033 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	CST26	P38226	397 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	CTM1	P38818	585 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	PES4	P39684	611 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	YCG1	Q06680	1035 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	ATG9	Q12142	997 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	SFI1	Q12369	946 aa		5.2	□□□□□ -1.58
SUP35	YDR172W	CBP1	P07252	654 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	PET123	P17558	318 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	GAR1	P28007	205 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	SAS3	P34218	831 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	RPC25	P35718	212 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	MIP6	P38760	659 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	BCD1	P38772	366 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	ALA1	P40825	983 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	CEP3	P40969	608 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	THI6	P41835	540 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	YGR117C	P53270	476 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	COG4	Q06096	861 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	OXR1	Q08952	273 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	LAP2	Q10740	671 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	RPS31	P05759	152 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	RAD53	P22216	821 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	YKL091C	P33324	310 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	OSH7	P38755	437 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	VPS45	P38932	577 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	SEC9	P40357	651 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	BNI5	P53890	448 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	YNL165W	P53891	406 aa		5.19	□□□□□ -1.58
SUP35	YDR172W	CWC15	Q03772	175 aa	Known RBP	5.19	□□□□□ -1.58
SUP35	YDR172W	AIM33	Q04516	312 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms