RNA–Protein interactions for RNA: YDR115W

YDR115W, Transcript of Putative mitochondrial ribosomal protein of the large subunit, yeast

Gene YDR115W, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR115W	YDR115W	XYL2	Q07993	356 aa		4.22	□□□□□ -1.73
YDR115W	YDR115W	CDC53	Q12018	815 aa	Known RBP	4.22	□□□□□ -1.73
YDR115W	YDR115W	YOR131C	Q12486	218 aa		4.22	□□□□□ -1.73
YDR115W	YDR115W	HSF1	P10961	833 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	GAL11	P19659	1081 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	YRO2	P38079	344 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	TSL1	P38427	1098 aa	Known RBP	4.21	□□□□□ -1.74
YDR115W	YDR115W	YHR020W	P38708	688 aa	Known RBP	4.21	□□□□□ -1.74
YDR115W	YDR115W	HUL5	P53119	910 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	YGR012W	P53206	393 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	ROT1	Q03691	256 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	YPR196W	Q06595	470 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	UBX5	Q06682	500 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	RXT3	Q07458	294 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	YDL124W	Q07551	312 aa	Known RBP	4.21	□□□□□ -1.74
YDR115W	YDR115W	FLC1	Q08967	793 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	YPL277C	Q08989	487 aa		4.21	□□□□□ -1.74
YDR115W	YDR115W	ENA1	P13587	1091 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
YDR115W	YDR115W	ATG19	P35193	415 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	PET10	P36139	283 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	POA1	P38218	177 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	UBP5	P39944	805 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	NPP2	P39997	493 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	IOC3	P43596	787 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	SPT20	P50875	604 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	YKE2	P52553	114 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
YDR115W	YDR115W	ENA2	Q01896	1091 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	PLB2	Q03674	706 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	BUL2	Q03758	920 aa	Known RBP	4.2	□□□□□ -1.74
YDR115W	YDR115W	DUS4	Q06063	367 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	CDA1	Q06702	301 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	GPB1	Q08886	897 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	ENA5	Q12691	1091 aa		4.2	□□□□□ -1.74
YDR115W	YDR115W	NPP1	P25353	742 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	SRP101	P32916	621 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	AFR1	P33304	620 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	VPS62	P53285	467 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	SFB2	P53953	876 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	RPN4	Q03465	531 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	TAF8	Q03750	510 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	ACK1	Q07622	623 aa	Predicted RBP	4.19	□□□□□ -1.74
YDR115W	YDR115W	ADY3	Q07732	790 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	NOP12	Q08208	459 aa	Known RBP	4.19	□□□□□ -1.74
YDR115W	YDR115W	HMI1	Q12039	706 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	HBN1	Q96VH4	193 aa		4.19	□□□□□ -1.74
YDR115W	YDR115W	YTA7	P40340	1379 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	YLR358C	O13565	187 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	SPE1	P08432	466 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	CDC6	P09119	513 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YDR115W	YDR115W	REC104	P33323	182 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	TOD6	P34219	525 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	THI80	P35202	319 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	CHZ1	P40019	153 aa	Predicted RBP	4.18	□□□□□ -1.74
YDR115W	YDR115W	TOK1	P40310	691 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	MET12	P46151	657 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	FPR4	Q06205	392 aa	Predicted RBP	4.18	□□□□□ -1.74
YDR115W	YDR115W	TPO1	Q07824	586 aa		4.18	□□□□□ -1.74
YDR115W	YDR115W	MSD1	P15179	658 aa	Known RBP	4.17	□□□□□ -1.74
YDR115W	YDR115W	YKL091C	P33324	310 aa	Known RBP	4.17	□□□□□ -1.74
YDR115W	YDR115W	RSP5	P39940	809 aa	Known RBP	4.17	□□□□□ -1.74
YDR115W	YDR115W	RAI1	P53063	387 aa	Known RBP	4.17	□□□□□ -1.74
YDR115W	YDR115W	GTF1	P53260	183 aa	Predicted RBP	4.17	□□□□□ -1.74
YDR115W	YDR115W	VPS30	Q02948	557 aa		4.17	□□□□□ -1.74
YDR115W	YDR115W	YPR071W	Q12346	211 aa		4.17	□□□□□ -1.74
YDR115W	YDR115W	CAN1	P04817	590 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	HIS5	P07172	385 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	STE11	P23561	717 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	CDC20	P26309	610 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	YBR284W	P38150	797 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	UBP6	P43593	499 aa	Known RBP	4.16	□□□□□ -1.74
YDR115W	YDR115W	OSW7	P43611	510 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	YAP6	Q03935	383 aa		4.16	□□□□□ -1.74
YDR115W	YDR115W	TOM70	P07213	617 aa	Known RBP	4.15	□□□□□ -1.75
YDR115W	YDR115W	MPH2	P0CD99	609 aa		4.15	□□□□□ -1.75
YDR115W	YDR115W	RFA1	P22336	621 aa	Known RBP	4.15	□□□□□ -1.75
YDR115W	YDR115W	EMC1	P25574	760 aa		4.15	□□□□□ -1.75
YDR115W	YDR115W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
YDR115W	YDR115W	NIT3	P49954	291 aa		4.15	□□□□□ -1.75
YDR115W	YDR115W	CLU1	Q03690	1277 aa	Known RBP	4.15	□□□□□ -1.75
YDR115W	YDR115W	PPM2	Q08282	695 aa		4.15	□□□□□ -1.75
YDR115W	YDR115W	NOT3	P06102	836 aa	Known RBP	4.14	□□□□□ -1.75
YDR115W	YDR115W	STE13	P33894	931 aa		4.14	□□□□□ -1.75
YDR115W	YDR115W	FLR1	P38124	548 aa		4.14	□□□□□ -1.75
YDR115W	YDR115W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
YDR115W	YDR115W	URM1	P40554	99 aa	Predicted RBP	4.14	□□□□□ -1.75
YDR115W	YDR115W	YLR224W	Q05947	369 aa		4.14	□□□□□ -1.75
YDR115W	YDR115W	ESC8	Q08119	714 aa		4.14	□□□□□ -1.75
YDR115W	YDR115W	TOP3	P13099	656 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	EMC3	P36039	253 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	BET3	P36149	193 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	ERT1	P38140	529 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	BUD6	P41697	788 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	CHA4	P43634	648 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	GCV2	P49095	1034 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	RTA1	P53047	317 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	ENV7	Q12003	364 aa		4.13	□□□□□ -1.75
YDR115W	YDR115W	URA1	P28272	314 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 74.7 ms