RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	YGR153W	P48238	217 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	UBX5	Q06682	500 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	OPY2	Q06810	360 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	MSC6	Q08818	692 aa	Known RBP	4.55	□□□□□ -1.68
BRE4	YDL231C	FAS2	P19097	1887 aa	Known RBP	4.55	□□□□□ -1.68
BRE4	YDL231C	SRD1	P09007	221 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	YEL076C-A	P0CX16	216 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	YLR464W	P0CX17	216 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	GFA1	P14742	717 aa	Known RBP	4.55	□□□□□ -1.68
BRE4	YDL231C	KAR3	P17119	729 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	APL1	P27351	700 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	HIR1	P32479	840 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
BRE4	YDL231C	YEL076C	P39971	216 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	MMM1	P41800	426 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	SBE2	P42223	864 aa	Known RBP	4.55	□□□□□ -1.68
BRE4	YDL231C	STR2	P47164	639 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	RPS7B	P48164	190 aa	Known RBP	4.55	□□□□□ -1.68
BRE4	YDL231C	NBP1	P52919	319 aa	Predicted RBP	4.55	□□□□□ -1.68
BRE4	YDL231C	MFM1	Q02783	413 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	PLP2	Q12017	286 aa		4.55	□□□□□ -1.68
BRE4	YDL231C	SEC20	P28791	383 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	SRB4	P32569	687 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	PGM1	P33401	570 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	DEF1	P35732	738 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	SMC3	P47037	1230 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	PSP2	P50109	593 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	SHS1	Q07657	551 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	YDJ1	P25491	409 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	PAN5	P38787	379 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
BRE4	YDL231C	EAF5	P39995	279 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	VAB2	P40003	282 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	PEA2	P40091	420 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	SAD1	P43589	448 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	RAD1	P06777	1100 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	MIP1	P15801	1254 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	YKL050C	P35736	922 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	YBP1	P38315	674 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	UTP7	P40055	554 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	ZPR1	P53303	486 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	DUS4	Q06063	367 aa		4.54	□□□□□ -1.68
BRE4	YDL231C	CSR1	Q06705	408 aa	Known RBP	4.54	□□□□□ -1.68
BRE4	YDL231C	SSB1	P11484	613 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	YGL015C	P33199	130 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	LTV1	P34078	463 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	SMF1	P38925	575 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	SSB2	P40150	613 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	AIP1	P46680	615 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	INA17	Q02888	182 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	OYE2	Q03558	400 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	ATG23	Q06671	453 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	YPR078C	Q06813	372 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	YDL057W	Q07379	328 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	OSW2	Q12202	724 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	MCM16	Q12262	181 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	NHA1	Q99271	985 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
BRE4	YDL231C	ISY1	P21374	235 aa	Predicted RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	PAP1	P29468	568 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	RFT1	P38206	574 aa	Predicted RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	OLA1	P38219	394 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	TMA64	Q04600	565 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	SKG3	Q06315	1026 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	VAC14	Q06708	880 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	RUD3	Q12234	484 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	CDC60	P26637	1090 aa	Known RBP	4.53	□□□□□ -1.68
BRE4	YDL231C	DPB3	P27344	201 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	MRX3	P38172	270 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	VFA1	P40080	203 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	BRE2	P43132	505 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	SOL4	P53315	255 aa		4.53	□□□□□ -1.68
BRE4	YDL231C	IME1	P21190	360 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	CLB5	P30283	435 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
BRE4	YDL231C	VID24	P38263	362 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	RAD26	P40352	1085 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	COG4	Q06096	861 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	YLR455W	Q06188	304 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	PUS5	Q06244	254 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	SMC5	Q08204	1093 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	APL5	Q08951	932 aa	Known RBP	4.52	□□□□□ -1.69
BRE4	YDL231C	YPL277C	Q08989	487 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	MED1	Q12321	566 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	CDC33	P07260	213 aa	Known RBP	4.52	□□□□□ -1.69
BRE4	YDL231C	GPI10	P30777	616 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	RPS0A	P32905	252 aa	Known RBP	4.52	□□□□□ -1.69
BRE4	YDL231C	PGM2	P37012	569 aa	Known RBP	4.52	□□□□□ -1.69
BRE4	YDL231C	EXO5	P38289	585 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	INP51	P40559	946 aa	Known RBP	4.52	□□□□□ -1.69
BRE4	YDL231C	YAF9	P53930	226 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	ERG5	P54781	538 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	TIM8	P57744	87 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
BRE4	YDL231C	CFT2	Q12102	859 aa	Predicted RBP	4.52	□□□□□ -1.69
BRE4	YDL231C	ZPS1	Q12512	249 aa		4.52	□□□□□ -1.69
BRE4	YDL231C	PPR1	P07272	904 aa	Predicted RBP	4.51	□□□□□ -1.69
BRE4	YDL231C	PHO13	P19881	312 aa		4.51	□□□□□ -1.69
BRE4	YDL231C	SRO9	P25567	434 aa	Known RBP	4.51	□□□□□ -1.69
BRE4	YDL231C	MUD1	P32605	298 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms