RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W BAS1P22035 811 aa4.52□□□□□ -1.69
TSR1YDL060W TRX2P22803 104 aaKnown RBP4.52□□□□□ -1.69
TSR1YDL060W MRC1P25588 1096 aa4.52□□□□□ -1.69
TSR1YDL060W PWP2P25635 923 aaKnown RBP4.52□□□□□ -1.69
TSR1YDL060W MOT2P34909 587 aaKnown RBP4.52□□□□□ -1.69
TSR1YDL060W VPS24P36095 224 aaKnown RBP4.52□□□□□ -1.69
TSR1YDL060W ERP2P39704 215 aa4.52□□□□□ -1.69
TSR1YDL060W PEX8P53248 589 aa4.52□□□□□ -1.69
TSR1YDL060W TMA64Q04600 565 aaKnown RBP4.52□□□□□ -1.69
TSR1YDL060W RKM4Q12504 494 aa4.52□□□□□ -1.69
TSR1YDL060W SSM4P40318 1319 aa4.51□□□□□ -1.69
TSR1YDL060W YKL107WP34251 309 aa4.51□□□□□ -1.69
TSR1YDL060W CEF1Q03654 590 aaPredicted RBP4.51□□□□□ -1.69
TSR1YDL060W SVS1Q12254 260 aa4.51□□□□□ -1.69
TSR1YDL060W CHD1P32657 1468 aa4.51□□□□□ -1.69
TSR1YDL060W OPY1P38271 328 aa4.51□□□□□ -1.69
TSR1YDL060W TY4A-JP47023 414 aa4.51□□□□□ -1.69
TSR1YDL060W TY1B-DR4Q07793 1604 aa4.51□□□□□ -1.69
TSR1YDL060W GEM1P39722 662 aa4.5□□□□□ -1.69
TSR1YDL060W YGL176CP46945 554 aa4.5□□□□□ -1.69
TSR1YDL060W YGR125WP53273 1036 aa4.5□□□□□ -1.69
TSR1YDL060W EEB1Q02891 456 aa4.5□□□□□ -1.69
TSR1YDL060W SVL3Q03088 825 aaKnown RBP4.5□□□□□ -1.69
TSR1YDL060W ACM1Q08981 209 aa4.5□□□□□ -1.69
TSR1YDL060W YDL177CQ12257 170 aa4.5□□□□□ -1.69
TSR1YDL060W SPT6P23615 1451 aaKnown RBP4.5□□□□□ -1.69
TSR1YDL060W RPL8AP17076 256 aaKnown RBP4.5□□□□□ -1.69
TSR1YDL060W APL1P27351 700 aa4.5□□□□□ -1.69
TSR1YDL060W MXR1P40029 184 aa4.5□□□□□ -1.69
TSR1YDL060W YLR225CQ05948 407 aaKnown RBP4.5□□□□□ -1.69
TSR1YDL060W YOR378WQ08902 515 aa4.5□□□□□ -1.69
TSR1YDL060W FAL1Q12099 399 aaKnown RBP4.5□□□□□ -1.69
TSR1YDL060W RPL11AP0C0W9 174 aaKnown RBP4.49□□□□□ -1.69
TSR1YDL060W STE5P32917 917 aa4.49□□□□□ -1.69
TSR1YDL060W MPE1P35728 441 aaKnown RBP4.49□□□□□ -1.69
TSR1YDL060W UGA2P38067 497 aa4.49□□□□□ -1.69
TSR1YDL060W AIM3P38266 947 aaKnown RBP4.49□□□□□ -1.69
TSR1YDL060W CDA2Q06703 312 aa4.49□□□□□ -1.69
TSR1YDL060W NTG2Q08214 380 aa4.49□□□□□ -1.69
TSR1YDL060W RPL11BQ3E757 174 aaPredicted RBP4.49□□□□□ -1.69
TSR1YDL060W CYC1P00044 109 aaPredicted RBP4.49□□□□□ -1.69
TSR1YDL060W CDC11P32458 415 aa4.49□□□□□ -1.69
TSR1YDL060W PIN4P34217 668 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
TSR1YDL060W YBR184WP38299 523 aa4.49□□□□□ -1.69
TSR1YDL060W YFL054CP43549 646 aa4.49□□□□□ -1.69
TSR1YDL060W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
TSR1YDL060W SGD1Q06132 899 aa4.49□□□□□ -1.69
TSR1YDL060W NKP1Q12493 238 aa4.49□□□□□ -1.69
TSR1YDL060W CAN1P04817 590 aa4.48□□□□□ -1.69
TSR1YDL060W RIM8P53179 542 aa4.48□□□□□ -1.69
TSR1YDL060W SLX4Q12098 748 aa4.48□□□□□ -1.69
TSR1YDL060W TMA17Q12513 150 aa4.48□□□□□ -1.69
TSR1YDL060W YJR120WP47157 116 aa4.48□□□□□ -1.69
TSR1YDL060W COG4Q06096 861 aa4.48□□□□□ -1.69
TSR1YDL060W HIR3P47171 1648 aa4.47□□□□□ -1.69
TSR1YDL060W CMP2P14747 604 aa4.47□□□□□ -1.69
TSR1YDL060W RPS13P05756 151 aaKnown RBP4.47□□□□□ -1.69
TSR1YDL060W CLC1P17891 233 aa4.47□□□□□ -1.69
TSR1YDL060W MSH2P25847 964 aa4.47□□□□□ -1.69
TSR1YDL060W RPL8BP29453 256 aaKnown RBP4.47□□□□□ -1.69
TSR1YDL060W SFP1P32432 683 aa4.47□□□□□ -1.69
TSR1YDL060W TSA1P34760 196 aaKnown RBP4.47□□□□□ -1.69
TSR1YDL060W PNT1P38969 423 aa4.47□□□□□ -1.69
TSR1YDL060W ATG13Q06628 738 aa4.47□□□□□ -1.69
TSR1YDL060W SPO75Q07798 868 aa4.47□□□□□ -1.69
TSR1YDL060W OSH2Q12451 1283 aa4.47□□□□□ -1.69
TSR1YDL060W ECM5Q03214 1411 aa4.46□□□□□ -1.7
TSR1YDL060W PRP6P19735 899 aaPredicted RBP4.46□□□□□ -1.7
TSR1YDL060W GGA2P38817 585 aaKnown RBP4.46□□□□□ -1.7
TSR1YDL060W LAM1P38851 1228 aa4.46□□□□□ -1.7
TSR1YDL060W TCB2P48231 1178 aa4.46□□□□□ -1.7
TSR1YDL060W PBP1P53297 722 aaKnown RBP4.46□□□□□ -1.7
TSR1YDL060W ROT1Q03691 256 aa4.46□□□□□ -1.7
TSR1YDL060W ESC2Q06340 456 aa4.46□□□□□ -1.7
TSR1YDL060W BPT1P14772 1559 aa4.46□□□□□ -1.7
TSR1YDL060W MYO2P19524 1574 aaKnown RBP4.46□□□□□ -1.7
TSR1YDL060W SOD2P00447 233 aa4.46□□□□□ -1.7
TSR1YDL060W ABD1P32783 436 aaPredicted RBP4.46□□□□□ -1.7
TSR1YDL060W TOD6P34219 525 aa4.46□□□□□ -1.7
TSR1YDL060W NOC2P39744 710 aaKnown RBP4.46□□□□□ -1.7
TSR1YDL060W RRT14P40470 206 aa4.46□□□□□ -1.7
TSR1YDL060W YGR237CP50089 785 aa4.46□□□□□ -1.7
TSR1YDL060W SPT20P50875 604 aa4.46□□□□□ -1.7
TSR1YDL060W GIR2Q03768 265 aaPredicted RBP4.46□□□□□ -1.7
TSR1YDL060W ATG16Q03818 150 aa4.46□□□□□ -1.7
TSR1YDL060W SND1Q04007 877 aa4.46□□□□□ -1.7
TSR1YDL060W YPL277CQ08989 487 aa4.46□□□□□ -1.7
TSR1YDL060W CIT1P00890 479 aa4.45□□□□□ -1.7
TSR1YDL060W HSP60P19882 572 aaKnown RBP4.45□□□□□ -1.7
TSR1YDL060W DBP2P24783 546 aaKnown RBP4.45□□□□□ -1.7
TSR1YDL060W VPS27P40343 622 aaKnown RBP4.45□□□□□ -1.7
TSR1YDL060W DAS1P47005 663 aa4.45□□□□□ -1.7
TSR1YDL060W BI4P03879 638 aa4.45□□□□□ -1.7
TSR1YDL060W SBA1P28707 216 aaKnown RBP4.45□□□□□ -1.7
TSR1YDL060W HLJ1P48353 224 aa4.45□□□□□ -1.7
TSR1YDL060W YGR021WP53212 290 aa4.45□□□□□ -1.7
TSR1YDL060W TFB2Q02939 513 aa4.45□□□□□ -1.7
TSR1YDL060W VMS1Q04311 632 aaKnown RBP4.45□□□□□ -1.7
TSR1YDL060W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
TSR1YDL060W TMA7Q3E764 64 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms