RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	RIP-Chip
SRD1	YCR018C	RSB1	Q08417	382 aa		4.14	□□□□□ -1.75
SRD1	YCR018C	YPR071W	Q12346	211 aa		4.14	□□□□□ -1.75
SRD1	YCR018C	YGR161W-C	Q3E744	92 aa		4.14	□□□□□ -1.75
SRD1	YCR018C	HBN1	Q96VH4	193 aa		4.14	□□□□□ -1.75
SRD1	YCR018C	BET3	P36149	193 aa		4.13	□□□□□ -1.75
SRD1	YCR018C	SRO9	P25567	434 aa	Known RBP	4.12	□□□□□ -1.75
SRD1	YCR018C	CTS1	P29029	562 aa		4.12	□□□□□ -1.75
SRD1	YCR018C	SFP1	P32432	683 aa		4.12	□□□□□ -1.75
SRD1	YCR018C	MDL2	P33311	773 aa		4.12	□□□□□ -1.75
SRD1	YCR018C	PIK1	P39104	1066 aa		4.12	□□□□□ -1.75
SRD1	YCR018C	YLR358C	O13565	187 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	TOP3	P13099	656 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	SNF5	P18480	905 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	MSH2	P25847	964 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	SLA2	P33338	968 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	PET10	P36139	283 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	GDH3	P39708	457 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	SIT1	P39980	628 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	YFL054C	P43549	646 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	UBP6	P43593	499 aa	Known RBP	4.11	□□□□□ -1.75
SRD1	YCR018C	LCD1	Q04377	747 aa		4.11	□□□□□ -1.75
SRD1	YCR018C	MSD1	P15179	658 aa	Known RBP	4.1	□□□□□ -1.75
SRD1	YCR018C	CDC12	P32468	407 aa	Known RBP	4.1	□□□□□ -1.75
SRD1	YCR018C	BAP2	P38084	609 aa		4.1	□□□□□ -1.75
SRD1	YCR018C	NOP14	Q99207	810 aa	Known RBP	4.1	□□□□□ -1.75
SRD1	YCR018C	BI4	P03879	638 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SRD1	YCR018C	SAM35	P14693	329 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	SRM1	P21827	482 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	AIM26	P32858	118 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	REC104	P33323	182 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	PEX6	P33760	1030 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	DSS1	P39112	969 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	YJR142W	P47173	342 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	CCM1	P48237	864 aa	Predicted RBP	4.09	□□□□□ -1.75
SRD1	YCR018C	UGO1	Q03327	502 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	HRQ1	Q05549	1077 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	YPR196W	Q06595	470 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	RSC58	Q07979	502 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	RCL1	Q08096	367 aa	Predicted RBP	4.09	□□□□□ -1.75
SRD1	YCR018C	NTG2	Q08214	380 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	YLL058W	Q12198	575 aa		4.09	□□□□□ -1.75
SRD1	YCR018C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SRD1	YCR018C	RAD53	P22216	821 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	GSY1	P23337	708 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	TSR4	P25040	408 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	RRT14	P40470	206 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	ALG2	P43636	503 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	SNO2	P53823	222 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	MDM38	Q08179	573 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	OSW2	Q12202	724 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	SVS1	Q12254	260 aa		4.08	□□□□□ -1.76
SRD1	YCR018C	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	YKL151C	P36059	337 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	TOK1	P40310	691 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	NIT3	P49954	291 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	FOL2	P51601	243 aa	Known RBP	4.07	□□□□□ -1.76
SRD1	YCR018C	YGL081W	P53156	320 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	DNM1	P54861	757 aa		4.07	□□□□□ -1.76
SRD1	YCR018C	ACE2	P21192	770 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	NPP1	P25353	742 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	CDC48	P25694	835 aa	Known RBP	4.06	□□□□□ -1.76
SRD1	YCR018C	YKR078W	P36158	585 aa	Known RBP	4.06	□□□□□ -1.76
SRD1	YCR018C	RFC5	P38251	354 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	CRP1	P38845	465 aa	Known RBP	4.06	□□□□□ -1.76
SRD1	YCR018C	YER158C	P40095	573 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	GYP7	P48365	746 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SRD1	YCR018C	TFB2	Q02939	513 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	SRT1	Q03175	343 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	ATG13	Q06628	738 aa		4.06	□□□□□ -1.76
SRD1	YCR018C	KIN2	P13186	1147 aa	Known RBP	4.05	□□□□□ -1.76
SRD1	YCR018C	RFA1	P22336	621 aa	Known RBP	4.05	□□□□□ -1.76
SRD1	YCR018C	FUN30	P31380	1131 aa		4.05	□□□□□ -1.76
SRD1	YCR018C	ERT1	P38140	529 aa		4.05	□□□□□ -1.76
SRD1	YCR018C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SRD1	YCR018C	HLJ1	P48353	224 aa		4.05	□□□□□ -1.76
SRD1	YCR018C	DAM1	P53267	343 aa		4.05	□□□□□ -1.76
SRD1	YCR018C	MDM12	Q92328	271 aa		4.05	□□□□□ -1.76
SRD1	YCR018C	RPL8A	P17076	256 aa	Known RBP	4.04	□□□□□ -1.76
SRD1	YCR018C	VBA3	P25594	458 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	APL1	P27351	700 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	AFR1	P33304	620 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	TSL1	P38427	1098 aa	Known RBP	4.04	□□□□□ -1.76
SRD1	YCR018C	GIC1	P38785	314 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	SEC26	P41810	973 aa	Known RBP	4.04	□□□□□ -1.76
SRD1	YCR018C	MAL11	P53048	616 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	MTC3	P53077	123 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	BUL2	Q03758	920 aa	Known RBP	4.04	□□□□□ -1.76
SRD1	YCR018C	RSM24	Q03976	319 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	IOC4	Q04213	475 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	YDR514C	Q04408	483 aa		4.04	□□□□□ -1.76
SRD1	YCR018C	RPC82	P32349	654 aa		4.03	□□□□□ -1.76
SRD1	YCR018C	HFM1	P51979	1187 aa		4.03	□□□□□ -1.76
SRD1	YCR018C	SFB2	P53953	876 aa		4.03	□□□□□ -1.76
SRD1	YCR018C	VPS30	Q02948	557 aa		4.03	□□□□□ -1.76
SRD1	YCR018C	YML122C	Q03207	126 aa		4.03	□□□□□ -1.76
SRD1	YCR018C	ENV7	Q12003	364 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms