RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C YKL133CP36066 463 aa2.78□□□□□ -1.96
CLN3YAL040C RRP14P36080 434 aaKnown RBP2.78□□□□□ -1.96
CLN3YAL040C AIM3P38266 947 aaKnown RBP2.78□□□□□ -1.96
CLN3YAL040C DOT5P40553 215 aa2.78□□□□□ -1.96
CLN3YAL040C GYP7P48365 746 aa2.78□□□□□ -1.96
CLN3YAL040C ZDS1P50111 915 aaKnown RBP2.78□□□□□ -1.96
CLN3YAL040C UTP5Q04177 643 aaKnown RBP2.78□□□□□ -1.96
CLN3YAL040C RSA3Q05942 220 aaKnown RBP2.78□□□□□ -1.96
CLN3YAL040C OSM1P21375 501 aaKnown RBP2.77□□□□□ -1.97
CLN3YAL040C VMA4P22203 233 aaKnown RBP2.77□□□□□ -1.97
CLN3YAL040C MSH3P25336 1018 aa2.77□□□□□ -1.97
CLN3YAL040C KCC4P25389 1037 aa2.77□□□□□ -1.97
CLN3YAL040C SRO9P25567 434 aaKnown RBP2.77□□□□□ -1.97
CLN3YAL040C SWC3P31376 625 aa2.77□□□□□ -1.97
CLN3YAL040C PRP40P33203 583 aaKnown RBP2.77□□□□□ -1.97
CLN3YAL040C TOM20P35180 183 aa2.77□□□□□ -1.97
CLN3YAL040C FLR1P38124 548 aa2.77□□□□□ -1.97
CLN3YAL040C TAF1P46677 1066 aa2.77□□□□□ -1.97
CLN3YAL040C RSM26P47141 266 aa2.77□□□□□ -1.97
CLN3YAL040C PEX13P80667 386 aa2.77□□□□□ -1.97
CLN3YAL040C YDL177CQ12257 170 aa2.77□□□□□ -1.97
CLN3YAL040C EDE1P34216 1381 aa2.77□□□□□ -1.97
CLN3YAL040C ROM2P51862 1356 aaKnown RBP2.77□□□□□ -1.97
CLN3YAL040C DUR1,2P32528 1835 aaKnown RBP2.77□□□□□ -1.97
CLN3YAL040C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
CLN3YAL040C RAD2P07276 1031 aa2.76□□□□□ -1.97
CLN3YAL040C SAM35P14693 329 aa2.76□□□□□ -1.97
CLN3YAL040C RAD4P14736 754 aa2.76□□□□□ -1.97
CLN3YAL040C RAD24P32641 659 aa2.76□□□□□ -1.97
CLN3YAL040C SEC8P32855 1065 aa2.76□□□□□ -1.97
CLN3YAL040C VPS35P34110 944 aa2.76□□□□□ -1.97
CLN3YAL040C YKR075CP36155 307 aa2.76□□□□□ -1.97
CLN3YAL040C ETP1P38748 585 aaKnown RBP2.76□□□□□ -1.97
CLN3YAL040C NAB3P38996 802 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
CLN3YAL040C YJL049WP47048 450 aa2.76□□□□□ -1.97
CLN3YAL040C ENV11P53246 860 aa2.76□□□□□ -1.97
CLN3YAL040C SNO2P53823 222 aa2.76□□□□□ -1.97
CLN3YAL040C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97 RIP-Chip
CLN3YAL040C OYE2Q03558 400 aaKnown RBP2.76□□□□□ -1.97
CLN3YAL040C RKM2Q03942 479 aa2.76□□□□□ -1.97
CLN3YAL040C CSI1Q04368 295 aa2.76□□□□□ -1.97
CLN3YAL040C PMD1P32634 1753 aa2.76□□□□□ -1.97
CLN3YAL040C SOD2P00447 233 aa2.76□□□□□ -1.97
CLN3YAL040C MGE1P38523 228 aa2.76□□□□□ -1.97
CLN3YAL040C MAM1P40065 302 aa2.76□□□□□ -1.97
CLN3YAL040C VPS53P47061 822 aa2.76□□□□□ -1.97
CLN3YAL040C TPO2P53283 614 aa2.76□□□□□ -1.97
CLN3YAL040C SPO1P53541 631 aa2.76□□□□□ -1.97
CLN3YAL040C ALG12P53730 551 aa2.76□□□□□ -1.97
CLN3YAL040C JIP5Q06214 492 aaPredicted RBP2.76□□□□□ -1.97
CLN3YAL040C HDA2Q06629 674 aa2.76□□□□□ -1.97
CLN3YAL040C NBA1Q08229 501 aaKnown RBP2.76□□□□□ -1.97
CLN3YAL040C GIN4Q12263 1142 aa2.76□□□□□ -1.97
CLN3YAL040C LYS2P07702 1392 aa2.76□□□□□ -1.97
CLN3YAL040C PPG1P32838 368 aa2.75□□□□□ -1.97
CLN3YAL040C AIM26P32858 118 aa2.75□□□□□ -1.97
CLN3YAL040C APL2P36000 726 aaPredicted RBP2.75□□□□□ -1.97
CLN3YAL040C QNS1P38795 714 aaKnown RBP2.75□□□□□ -1.97
CLN3YAL040C PEX28P38848 579 aa2.75□□□□□ -1.97
CLN3YAL040C NMD3P38861 518 aaKnown RBP2.75□□□□□ -1.97
CLN3YAL040C IOC3P43596 787 aa2.75□□□□□ -1.97
CLN3YAL040C YJL045WP47052 634 aa2.75□□□□□ -1.97
CLN3YAL040C YGL081WP53156 320 aa2.75□□□□□ -1.97
CLN3YAL040C YBP2P53169 641 aa2.75□□□□□ -1.97
CLN3YAL040C YNR063WP53749 607 aa2.75□□□□□ -1.97
CLN3YAL040C CTF4Q01454 927 aa2.75□□□□□ -1.97
CLN3YAL040C ULP1Q02724 621 aa2.75□□□□□ -1.97
CLN3YAL040C RPN4Q03465 531 aa2.75□□□□□ -1.97
CLN3YAL040C DAL4Q04895 635 aa2.75□□□□□ -1.97
CLN3YAL040C ATG13Q06628 738 aa2.75□□□□□ -1.97
CLN3YAL040C OXR1Q08952 273 aa2.75□□□□□ -1.97
CLN3YAL040C SWI1P09547 1314 aa2.75□□□□□ -1.97
CLN3YAL040C CIT2P08679 460 aa2.74□□□□□ -1.97
CLN3YAL040C SSB1P11484 613 aaKnown RBP2.74□□□□□ -1.97
CLN3YAL040C MRP7P12687 371 aa2.74□□□□□ -1.97
CLN3YAL040C NUP133P36161 1157 aa2.74□□□□□ -1.97
CLN3YAL040C SSB2P40150 613 aaKnown RBP2.74□□□□□ -1.97
CLN3YAL040C RPN11P43588 306 aaKnown RBP2.74□□□□□ -1.97
CLN3YAL040C FCP1Q03254 732 aa2.74□□□□□ -1.97
CLN3YAL040C VPS64Q03944 604 aa2.74□□□□□ -1.97
CLN3YAL040C NSE3Q05541 303 aa2.74□□□□□ -1.97
CLN3YAL040C YDR306CQ06640 478 aa2.74□□□□□ -1.97
CLN3YAL040C YOL057WQ08225 711 aa2.74□□□□□ -1.97
CLN3YAL040C YOR352WQ08816 343 aa2.74□□□□□ -1.97
CLN3YAL040C YPL277CQ08989 487 aa2.74□□□□□ -1.97
CLN3YAL040C RPS13P05756 151 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C PHO4P07270 312 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C RPS19AP07280 144 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C RPS19BP07281 144 aaPredicted RBP2.73□□□□□ -1.97
CLN3YAL040C TSR4P25040 408 aa2.73□□□□□ -1.97
CLN3YAL040C MET4P32389 672 aa2.73□□□□□ -1.97
CLN3YAL040C SRP40P32583 406 aaPredicted RBP2.73□□□□□ -1.97
CLN3YAL040C TOD6P34219 525 aa2.73□□□□□ -1.97
CLN3YAL040C ADD66P36040 267 aa2.73□□□□□ -1.97
CLN3YAL040C YNG2P38806 282 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C NPR2P39923 615 aa2.73□□□□□ -1.97
CLN3YAL040C BUD27P43573 796 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
CLN3YAL040C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
CLN3YAL040C POB3Q04636 552 aaKnown RBP2.73□□□□□ -1.97
CLN3YAL040C RSC58Q07979 502 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 241.9 ms