RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 SLFN5Q08AF3 891 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
TVP23C-208ENST00000581273 SNX21Q969T3 373 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 ERBB3P21860 1342 aa9.26□□□□□ -0.93
TVP23C-208ENST00000581273 MON2Q7Z3U7 1717 aa9.25□□□□□ -0.93
TVP23C-208ENST00000581273 CANXP27824 592 aaKnown RBP9.25□□□□□ -0.93
TVP23C-208ENST00000581273 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
TVP23C-208ENST00000581273 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
TVP23C-208ENST00000581273 TRMT2AQ8IZ69 625 aaKnown RBP9.25□□□□□ -0.93
TVP23C-208ENST00000581273 GTPBP4Q9BZE4 634 aaKnown RBP9.25□□□□□ -0.93
TVP23C-208ENST00000581273 PRDM4Q9UKN5 801 aa9.25□□□□□ -0.93
TVP23C-208ENST00000581273 ZNF521Q96K83 1311 aa9.25□□□□□ -0.93
TVP23C-208ENST00000581273 NPC1L1Q9UHC9 1359 aa9.24□□□□□ -0.93
TVP23C-208ENST00000581273 C10orf71Q711Q0 1435 aa9.24□□□□□ -0.93
TVP23C-208ENST00000581273 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
TVP23C-208ENST00000581273 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
TVP23C-208ENST00000581273 KIF20AO95235 890 aa9.24□□□□□ -0.93
TVP23C-208ENST00000581273 PRIM1P49642 420 aaKnown RBP9.24□□□□□ -0.93
TVP23C-208ENST00000581273 CNGB1Q14028 1251 aaPredicted RBP9.24□□□□□ -0.93
TVP23C-208ENST00000581273 PHF12Q96QT6 1004 aa9.24□□□□□ -0.93
TVP23C-208ENST00000581273 RGPD2P0DJD1 1756 aa9.24□□□□□ -0.93
TVP23C-208ENST00000581273 TNRC6CQ9HCJ0 1690 aaKnown RBP9.23□□□□□ -0.93
TVP23C-208ENST00000581273 PXDNLA1KZ92 1463 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 PKD1L3Q7Z443 1732 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 NASPP49321 788 aaPredicted RBP9.23□□□□□ -0.93
TVP23C-208ENST00000581273 FGD1P98174 961 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 SLC27A3Q5K4L6 730 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 C20orf194Q5TEA3 1177 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
TVP23C-208ENST00000581273 PANK2Q9BZ23 570 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 SLC12A5Q9H2X9 1139 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 WBP1LQ9NX94 342 aa9.23□□□□□ -0.93
TVP23C-208ENST00000581273 DOT1LQ8TEK3 1739 aa9.22□□□□□ -0.93
TVP23C-208ENST00000581273 HMGN5P82970 282 aaKnown RBP9.22□□□□□ -0.93
TVP23C-208ENST00000581273 SASS6Q6UVJ0 657 aa9.22□□□□□ -0.93
TVP23C-208ENST00000581273 SMC5Q8IY18 1101 aa9.22□□□□□ -0.93
TVP23C-208ENST00000581273 C22orf23Q9BZE7 217 aa9.22□□□□□ -0.93
TVP23C-208ENST00000581273 GZF1Q9H116 711 aaPredicted RBP9.22□□□□□ -0.93
TVP23C-208ENST00000581273 RYDENQ9NUL5 291 aaKnown RBP9.22□□□□□ -0.93
TVP23C-208ENST00000581273 BCS1LQ9Y276 419 aa9.22□□□□□ -0.93
TVP23C-208ENST00000581273 LETM1O95202 739 aaPredicted RBP9.21□□□□□ -0.94
TVP23C-208ENST00000581273 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
TVP23C-208ENST00000581273 CCDC39Q9UFE4 941 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 CCNL1Q9UK58 526 aaPredicted RBP9.21□□□□□ -0.94
TVP23C-208ENST00000581273 KNSTRNQ9Y448 316 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 KIF16BQ96L93 1317 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 CNTNAP1P78357 1384 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 USP31Q70CQ4 1352 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 PLEKHG2Q9H7P9 1386 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 SBNO2Q9Y2G9 1366 aa9.21□□□□□ -0.94
TVP23C-208ENST00000581273 LY75O60449 1722 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 N4BP2Q86UW6 1770 aaPredicted RBP9.2□□□□□ -0.94
TVP23C-208ENST00000581273 FBLN1P23142 703 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 AMPHP49418 695 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 VEGFBP49765 207 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 CLEC17AQ6ZS10 378 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 ZCRB1Q8TBF4 217 aaKnown RBP9.2□□□□□ -0.94
TVP23C-208ENST00000581273 IP6K1Q92551 441 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 CCDC94Q9BW85 323 aaPredicted RBP9.2□□□□□ -0.94
TVP23C-208ENST00000581273 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 NOL7Q9UMY1 257 aaKnown RBP9.2□□□□□ -0.94
TVP23C-208ENST00000581273 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
TVP23C-208ENST00000581273 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
TVP23C-208ENST00000581273 CT47B1P0C2W7 299 aaPredicted RBP9.19□□□□□ -0.94
TVP23C-208ENST00000581273 DMTNQ08495 405 aa9.19□□□□□ -0.94
TVP23C-208ENST00000581273 RAB3GAP1Q15042 981 aa9.19□□□□□ -0.94
TVP23C-208ENST00000581273 KLHL40Q2TBA0 621 aa9.19□□□□□ -0.94
TVP23C-208ENST00000581273 ADAMTS8Q9UP79 889 aa9.19□□□□□ -0.94
TVP23C-208ENST00000581273 CD163L1Q9NR16 1453 aa9.19□□□□□ -0.94
TVP23C-208ENST00000581273 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
TVP23C-208ENST00000581273 UQCRHLA0A096LP55 91 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 UQCRHP07919 91 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 ZNF445P59923 1031 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
TVP23C-208ENST00000581273 ANKRD36BQ8N2N9 1353 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 USHBP1Q8N6Y0 703 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 PRIMPOLQ96LW4 560 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 MCOLN1Q9GZU1 580 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 CHMP4BQ9H444 224 aaKnown RBP9.18□□□□□ -0.94
TVP23C-208ENST00000581273 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 RNF181Q9P0P0 153 aa9.18□□□□□ -0.94
TVP23C-208ENST00000581273 A0A1W2PP64 1363 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 ERBB4Q15303 1308 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 PPP2R1AP30153 589 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 SOX10P56693 466 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 NUCB2P80303 420 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 PDE4CQ08493 712 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 CC2D1BQ5T0F9 858 aaKnown RBP9.17□□□□□ -0.94
TVP23C-208ENST00000581273 SKAP1Q86WV1 359 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 MS4A3Q96HJ5 214 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 COG3Q96JB2 828 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 PANK3Q9H999 370 aa9.17□□□□□ -0.94
TVP23C-208ENST00000581273 NSD2O96028 1365 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 MAP3K19Q56UN5 1328 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 IGHDP01880 384 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 HOXC9P31274 260 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 DDIT3P35638 169 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 CLCN6P51797 869 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms