RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 DZIP3Q86Y13 1208 aaKnown RBP18.86■□□□□ 0.61
SPG7-213ENST00000566221 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
SPG7-213ENST00000566221 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
SPG7-213ENST00000566221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.85■□□□□ 0.61
SPG7-213ENST00000566221 PHF14O94880 888 aa18.85■□□□□ 0.61
SPG7-213ENST00000566221 AMIGO3Q86WK7 504 aa18.85■□□□□ 0.61
SPG7-213ENST00000566221 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
SPG7-213ENST00000566221 FRAT1Q92837 279 aaPredicted RBP18.85■□□□□ 0.61
SPG7-213ENST00000566221 NOB1Q9ULX3 412 aaKnown RBP18.85■□□□□ 0.61
SPG7-213ENST00000566221 CASZ1Q86V15 1759 aa18.85■□□□□ 0.61
SPG7-213ENST00000566221 MAP3K15Q6ZN16 1313 aa18.84■□□□□ 0.61
SPG7-213ENST00000566221 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
SPG7-213ENST00000566221 ZKSCAN2Q63HK3 967 aa18.84■□□□□ 0.61
SPG7-213ENST00000566221 TTLL7Q6ZT98 887 aa18.84■□□□□ 0.61
SPG7-213ENST00000566221 API5Q9BZZ5 524 aaKnown RBP18.84■□□□□ 0.61
SPG7-213ENST00000566221 ADCY9O60503 1353 aa18.83■□□□□ 0.61
SPG7-213ENST00000566221 PNPLA7Q6ZV29 1317 aa18.83■□□□□ 0.61
SPG7-213ENST00000566221 PLBD2Q8NHP8 589 aa18.83■□□□□ 0.6
SPG7-213ENST00000566221 COL24A1Q17RW2 1714 aa18.83■□□□□ 0.6
SPG7-213ENST00000566221 RGL2O15211 777 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 RFC4P35249 363 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 RRP1P56182 461 aaKnown RBP18.82■□□□□ 0.6
SPG7-213ENST00000566221 KSR2Q6VAB6 950 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 ATF7IPQ6VMQ6 1270 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 ARHGEF1Q92888 912 aaKnown RBP18.82■□□□□ 0.6
SPG7-213ENST00000566221 ARXQ96QS3 562 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
SPG7-213ENST00000566221 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 USP42Q9H9J4 1324 aaKnown RBP18.81■□□□□ 0.6
SPG7-213ENST00000566221 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 ZPR1O75312 459 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 CAMTA2O94983 1202 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 RIC3Q7Z5B4 369 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 SPON1Q9HCB6 807 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 NARFQ9UHQ1 456 aa18.81■□□□□ 0.6
SPG7-213ENST00000566221 TRIM27P14373 513 aa18.8■□□□□ 0.6
SPG7-213ENST00000566221 DNAAF4Q8WXU2 420 aa18.8■□□□□ 0.6
SPG7-213ENST00000566221 ZNF652Q9Y2D9 606 aa18.8■□□□□ 0.6
SPG7-213ENST00000566221 MAP3K2Q9Y2U5 619 aa18.8■□□□□ 0.6
SPG7-213ENST00000566221 ATP10DQ9P241 1426 aa18.8■□□□□ 0.6
SPG7-213ENST00000566221 ABCC4O15439 1325 aa18.79■□□□□ 0.6
SPG7-213ENST00000566221 MS4A1P11836 297 aa18.79■□□□□ 0.6
SPG7-213ENST00000566221 SUPT16HQ9Y5B9 1047 aaKnown RBP18.79■□□□□ 0.6
SPG7-213ENST00000566221 GIGYF2Q6Y7W6 1299 aaKnown RBP18.78■□□□□ 0.6
SPG7-213ENST00000566221 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
SPG7-213ENST00000566221 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
SPG7-213ENST00000566221 SRP68Q9UHB9 627 aaKnown RBP18.78■□□□□ 0.6
SPG7-213ENST00000566221 F6X3S4 739 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 MSH5O43196 834 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 PLIN1O60240 522 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 NEXNQ0ZGT2 675 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 HSP90AB3PQ58FF7 597 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 USPL1Q5W0Q7 1092 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 CLEC4GQ6UXB4 293 aa18.77■□□□□ 0.6
SPG7-213ENST00000566221 METTL22Q9BUU2 404 aaPredicted RBP18.77■□□□□ 0.6
SPG7-213ENST00000566221 HLFQ16534 295 aa18.76■□□□□ 0.59
SPG7-213ENST00000566221 DZIP1LQ8IYY4 767 aaKnown RBP18.76■□□□□ 0.59
SPG7-213ENST00000566221 ZNF784Q8NCA9 323 aaPredicted RBP18.76■□□□□ 0.59
SPG7-213ENST00000566221 LAMB2P55268 1798 aa18.76■□□□□ 0.59
SPG7-213ENST00000566221 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
SPG7-213ENST00000566221 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
SPG7-213ENST00000566221 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
SPG7-213ENST00000566221 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
SPG7-213ENST00000566221 MYH3P11055 1940 aa18.74■□□□□ 0.59
SPG7-213ENST00000566221 GYS1P13807 737 aa18.74■□□□□ 0.59
SPG7-213ENST00000566221 CCT4P50991 539 aaKnown RBP18.74■□□□□ 0.59
SPG7-213ENST00000566221 TCIRG1Q13488 830 aa18.74■□□□□ 0.59
SPG7-213ENST00000566221 LINS1Q8NG48 757 aa18.74■□□□□ 0.59
SPG7-213ENST00000566221 MYD88Q99836 296 aa18.74■□□□□ 0.59
SPG7-213ENST00000566221 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
SPG7-213ENST00000566221 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
SPG7-213ENST00000566221 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
SPG7-213ENST00000566221 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
SPG7-213ENST00000566221 RLBP1P12271 317 aa18.72■□□□□ 0.59
SPG7-213ENST00000566221 BEND3Q5T5X7 828 aa18.72■□□□□ 0.59
SPG7-213ENST00000566221 INTS3Q68E01 1043 aaKnown RBP18.72■□□□□ 0.59
SPG7-213ENST00000566221 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
SPG7-213ENST00000566221 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
SPG7-213ENST00000566221 TRIM28Q13263 835 aaKnown RBP18.71■□□□□ 0.59
SPG7-213ENST00000566221 FKBP8Q14318 412 aa18.71■□□□□ 0.59
SPG7-213ENST00000566221 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
SPG7-213ENST00000566221 ZNF34Q8IZ26 560 aa18.71■□□□□ 0.59
SPG7-213ENST00000566221 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
SPG7-213ENST00000566221 PANK1Q8TE04 598 aa18.71■□□□□ 0.59
SPG7-213ENST00000566221 ISCA1Q9BUE6 129 aa18.71■□□□□ 0.59
SPG7-213ENST00000566221 NIP7Q9Y221 180 aaKnown RBP eCLIP18.71■□□□□ 0.59
SPG7-213ENST00000566221 CARMIL3Q8ND23 1372 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 ATP5J2-PTCD1G3V325 749 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 IGKV5-2P06315 115 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 GPTP24298 496 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 TBC1D9BQ66K14 1250 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 DDX60Q8IY21 1712 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms