RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TULP1O00294 542 aaPredicted RBP11.43□□□□□ -0.58
SPG11-213ENST00000558988 AMHR2Q16671 573 aa11.43□□□□□ -0.58
SPG11-213ENST00000558988 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
SPG11-213ENST00000558988 HELBQ8NG08 1087 aaPredicted RBP11.43□□□□□ -0.58
SPG11-213ENST00000558988 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
SPG11-213ENST00000558988 ERVH48-1M5A8F1 160 aa11.42□□□□□ -0.58
SPG11-213ENST00000558988 POU4F2Q12837 409 aa11.42□□□□□ -0.58
SPG11-213ENST00000558988 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
SPG11-213ENST00000558988 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
SPG11-213ENST00000558988 KDM5DQ9BY66 1539 aa11.41□□□□□ -0.58
SPG11-213ENST00000558988 LILRB3O75022 631 aa11.41□□□□□ -0.58
SPG11-213ENST00000558988 NUCKS1Q9H1E3 243 aaKnown RBP11.41□□□□□ -0.58
SPG11-213ENST00000558988 PTPRTO14522 1441 aa11.41□□□□□ -0.58
SPG11-213ENST00000558988 TNRQ92752 1358 aa11.41□□□□□ -0.58
SPG11-213ENST00000558988 GNB5O14775 395 aa11.4□□□□□ -0.58
SPG11-213ENST00000558988 AMPD1P23109 780 aa11.4□□□□□ -0.58
SPG11-213ENST00000558988 OCSTAMPQ9BR26 566 aa11.4□□□□□ -0.58
SPG11-213ENST00000558988 GDF2Q9UK05 429 aaPredicted RBP11.4□□□□□ -0.58
SPG11-213ENST00000558988 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.59
SPG11-213ENST00000558988 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
SPG11-213ENST00000558988 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
SPG11-213ENST00000558988 ZFP64Q9NPA5 681 aa11.39□□□□□ -0.59
SPG11-213ENST00000558988 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
SPG11-213ENST00000558988 ARTNQ5T4W7 220 aa11.38□□□□□ -0.59
SPG11-213ENST00000558988 GOLGA2P5Q9HBQ8 144 aa11.38□□□□□ -0.59
SPG11-213ENST00000558988 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
SPG11-213ENST00000558988 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
SPG11-213ENST00000558988 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
SPG11-213ENST00000558988 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
SPG11-213ENST00000558988 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
SPG11-213ENST00000558988 CFHR5Q9BXR6 569 aa11.37□□□□□ -0.59
SPG11-213ENST00000558988 PZPP20742 1482 aa11.37□□□□□ -0.59
SPG11-213ENST00000558988 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
SPG11-213ENST00000558988 MEN1O00255 615 aa11.36□□□□□ -0.59
SPG11-213ENST00000558988 PIK3R2O00459 728 aa11.36□□□□□ -0.59
SPG11-213ENST00000558988 GPC1P35052 558 aa11.36□□□□□ -0.59
SPG11-213ENST00000558988 NBPF20Q3BBV1 942 aa11.36□□□□□ -0.59
SPG11-213ENST00000558988 KIF15Q9NS87 1388 aa11.36□□□□□ -0.59
SPG11-213ENST00000558988 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
SPG11-213ENST00000558988 CFAP65Q6ZU64 1925 aaKnown RBP11.35□□□□□ -0.59
SPG11-213ENST00000558988 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
SPG11-213ENST00000558988 GOLGA6L1Q8N7Z2 621 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 PLA2R1Q13018 1463 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 CEP152O94986 1710 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
SPG11-213ENST00000558988 ABCC3O15438 1527 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 FGD6Q6ZV73 1430 aa11.35□□□□□ -0.59
SPG11-213ENST00000558988 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
SPG11-213ENST00000558988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.34□□□□□ -0.59
SPG11-213ENST00000558988 THBS1P07996 1170 aa11.34□□□□□ -0.59
SPG11-213ENST00000558988 RSPO4Q2I0M5 234 aaPredicted RBP11.34□□□□□ -0.59
SPG11-213ENST00000558988 LTBP4Q8N2S1 1624 aa11.34□□□□□ -0.59
SPG11-213ENST00000558988 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
SPG11-213ENST00000558988 ABCC5O15440 1437 aa11.34□□□□□ -0.59
SPG11-213ENST00000558988 DAPK1P53355 1430 aa11.34□□□□□ -0.59
SPG11-213ENST00000558988 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
SPG11-213ENST00000558988 NBPF11Q86T75 865 aa11.33□□□□□ -0.6
SPG11-213ENST00000558988 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
SPG11-213ENST00000558988 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
SPG11-213ENST00000558988 EIF2AK4Q9P2K8 1649 aaKnown RBP11.33□□□□□ -0.6
SPG11-213ENST00000558988 FAM135AQ9P2D6 1515 aa11.33□□□□□ -0.6
SPG11-213ENST00000558988 TCOF1Q13428 1488 aaKnown RBP11.32□□□□□ -0.6
SPG11-213ENST00000558988 F11P03951 625 aa11.32□□□□□ -0.6
SPG11-213ENST00000558988 GATA4P43694 442 aa11.32□□□□□ -0.6
SPG11-213ENST00000558988 TUSC1Q2TAM9 212 aa11.32□□□□□ -0.6
SPG11-213ENST00000558988 PPARGC1BQ86YN6 1023 aaKnown RBP11.32□□□□□ -0.6
SPG11-213ENST00000558988 NOP53Q9NZM5 478 aaKnown RBP11.32□□□□□ -0.6
SPG11-213ENST00000558988 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
SPG11-213ENST00000558988 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
SPG11-213ENST00000558988 MROH1Q8NDA8 1641 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
SPG11-213ENST00000558988 UBAP1LF5GYI3 381 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 PTK2Q05397 1052 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 BTBD6Q96KE9 485 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 TIMMDC1Q9NPL8 285 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 UGGT1Q9NYU2 1555 aa11.31□□□□□ -0.6
SPG11-213ENST00000558988 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
SPG11-213ENST00000558988 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
SPG11-213ENST00000558988 ANKLE2Q86XL3 938 aa11.3□□□□□ -0.6
SPG11-213ENST00000558988 THEMISQ8N1K5 641 aaPredicted RBP11.3□□□□□ -0.6
SPG11-213ENST00000558988 ERVK-7P63135 1459 aa11.3□□□□□ -0.6
SPG11-213ENST00000558988 NLRP1Q9C000 1473 aa11.3□□□□□ -0.6
SPG11-213ENST00000558988 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
SPG11-213ENST00000558988 NKAPLQ5M9Q1 402 aa11.29□□□□□ -0.6
SPG11-213ENST00000558988 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
SPG11-213ENST00000558988 KANK1Q14678 1352 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 ERBINQ96RT1 1412 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 DGKGP49619 791 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 SLCO4C1Q6ZQN7 724 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 PARP9Q8IXQ6 854 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 GRIP2Q9C0E4 1043 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
SPG11-213ENST00000558988 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
SPG11-213ENST00000558988 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms