RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 RPRD2Q5VT52 1461 aaKnown RBP8.28□□□□□ -1.08
SMARCC2-213ENST00000552627 SOX11P35716 441 aa8.28□□□□□ -1.08
SMARCC2-213ENST00000552627 RELBQ01201 579 aa8.28□□□□□ -1.08
SMARCC2-213ENST00000552627 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
SMARCC2-213ENST00000552627 NEURL4Q96JN8 1562 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 RAB3GAP2Q9H2M9 1393 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 SPINT1O43278 529 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 MAN1A2O60476 641 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 ADH1AP07327 375 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 CLTCL1P53675 1640 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 ADGRB3O60242 1522 aa8.27□□□□□ -1.09
SMARCC2-213ENST00000552627 ERVK-9P63128 1117 aa8.26□□□□□ -1.09
SMARCC2-213ENST00000552627 IDI1Q13907 227 aa8.26□□□□□ -1.09
SMARCC2-213ENST00000552627 CC2D2BQ6DHV5 1058 aa8.26□□□□□ -1.09
SMARCC2-213ENST00000552627 SOS2Q07890 1332 aaPredicted RBP8.26□□□□□ -1.09
SMARCC2-213ENST00000552627 PLA2R1Q13018 1463 aa8.26□□□□□ -1.09
SMARCC2-213ENST00000552627 TMEM131LA2VDJ0 1609 aa8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 SOBPA7XYQ1 873 aa8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 PTGIRP43119 386 aa8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 PHTF2Q8N3S3 785 aa8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 ZNF395Q9H8N7 513 aaPredicted RBP8.25□□□□□ -1.09
SMARCC2-213ENST00000552627 KDM5AP29375 1690 aaKnown RBP8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 TRPM2O94759 1503 aa8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 SCTRP47872 440 aa8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 RNF135Q8IUD6 432 aa8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 INSM2Q96T92 566 aaPredicted RBP8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
SMARCC2-213ENST00000552627 PTPRTO14522 1441 aa8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 THEMISQ8N1K5 641 aaPredicted RBP8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 KDF1Q8NAX2 398 aaPredicted RBP8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 DNMT3LQ9UJW3 386 aa8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 ARHGAP23Q9P227 1491 aa8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 SLIT1O75093 1534 aa8.23□□□□□ -1.09
SMARCC2-213ENST00000552627 KIF1BO60333 1816 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 MYCP01106 439 aaPredicted RBP8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 LTKP29376 864 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 MPHOSPH9Q99550 1183 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 CDCA7Q9BWT1 371 aaPredicted RBP8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 ALG2Q9H553 416 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 NXF1Q9UBU9 619 aaKnown RBP8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 TMEM2Q9UHN6 1383 aa8.22□□□□□ -1.09
SMARCC2-213ENST00000552627 NPHP4O75161 1426 aaPredicted RBP8.21□□□□□ -1.09
SMARCC2-213ENST00000552627 TERTO14746 1132 aaKnown RBP8.21□□□□□ -1.1
SMARCC2-213ENST00000552627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.17e-7■■□□□ 11.4
SMARCC2-213ENST00000552627 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
SMARCC2-213ENST00000552627 CYP2U1Q7Z449 544 aa8.21□□□□□ -1.1
SMARCC2-213ENST00000552627 ANKLE2Q86XL3 938 aa8.21□□□□□ -1.1
SMARCC2-213ENST00000552627 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.1
SMARCC2-213ENST00000552627 TRAK2O60296 914 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 USP4Q13107 963 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 TXNDC2Q86VQ3 553 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 OSBPL3Q9H4L5 887 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 ZNF335Q9H4Z2 1342 aaPredicted RBP8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 RIMS2Q9UQ26 1411 aa8.2□□□□□ -1.1
SMARCC2-213ENST00000552627 MED14O60244 1454 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 A0A1W2PRU2 124 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 POM121CA8CG34 1229 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 WFS1O76024 890 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 MAP7D1Q3KQU3 841 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 OXLD1Q5BKU9 147 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 NPAS3Q8IXF0 933 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
SMARCC2-213ENST00000552627 MEN1O00255 615 aa8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 NFX1Q12986 1120 aaKnown RBP8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 PLPP7Q8NBV4 271 aa8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 SLC16A10Q8TF71 515 aa8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 NEXMIFQ5QGS0 1516 aa8.18□□□□□ -1.1
SMARCC2-213ENST00000552627 A6NJR5 290 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 GNRH1P01148 92 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 HDGFL1Q5TGJ6 251 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 RNF217Q8TC41 542 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 NLRP3Q96P20 1036 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 EID1Q9Y6B2 187 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 CCDC144AA2RUR9 1427 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 PPLO60437 1756 aa8.17□□□□□ -1.1
SMARCC2-213ENST00000552627 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 VEGFBP49765 207 aa8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 CLN3Q13286 438 aa8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 SLC26A8Q96RN1 970 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms