RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 MYOM2P54296 1465 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 ZFYVE16Q7Z3T8 1539 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 CARNS1A5YM72 827 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 PPM1GO15355 546 aaPredicted RBP7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 ZBTB24O43167 697 aaPredicted RBP7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 ERFEQ4G0M1 354 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 NKX2-3Q8TAU0 364 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 CDV3Q9UKY7 258 aaKnown RBP7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 ZMIZ1Q9ULJ6 1067 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 NOD1Q9Y239 953 aa7.75□□□□□ -1.17
CHMP4A-210ENST00000552620 SBNO2Q9Y2G9 1366 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 E9PSI1 815 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 KIF3BO15066 747 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 RGS20O76081 388 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 GGCXP38435 758 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 CRTC2Q53ET0 693 aaPredicted RBP7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 TMEM164Q5U3C3 297 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 FAM200AQ8TCP9 573 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 FOXJ1Q92949 421 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 PUS7Q96PZ0 661 aaKnown RBP7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 KDM2BQ8NHM5 1336 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 CLTCL1P53675 1640 aa7.74□□□□□ -1.17
CHMP4A-210ENST00000552620 PLIN1O60240 522 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 PTK7Q13308 1070 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 TRAF7Q6Q0C0 670 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 STK32AQ8WU08 396 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 RPGRIP1LQ68CZ1 1315 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 ATP7AQ04656 1500 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 LMTK2Q8IWU2 1503 aa7.73□□□□□ -1.17
CHMP4A-210ENST00000552620 PLEKHH1Q9ULM0 1364 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 AAMPQ13685 434 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 SEPT12Q8IYM1 358 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 OGFOD1Q8N543 542 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 SIRT1Q96EB6 747 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 CDCA7Q9BWT1 371 aaPredicted RBP7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 C1QTNF2Q9BXJ5 285 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 FANCAO15360 1455 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 NRXN1Q9ULB1 1477 aa7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 KDM5AP29375 1690 aaKnown RBP7.72□□□□□ -1.17
CHMP4A-210ENST00000552620 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.17
CHMP4A-210ENST00000552620 NINLQ9Y2I6 1382 aa7.71□□□□□ -1.17
CHMP4A-210ENST00000552620 INO80Q9ULG1 1556 aaPredicted RBP7.71□□□□□ -1.17
CHMP4A-210ENST00000552620 ABCA9Q8IUA7 1624 aa7.71□□□□□ -1.17
CHMP4A-210ENST00000552620 MAP3K4Q9Y6R4 1608 aa7.71□□□□□ -1.17
CHMP4A-210ENST00000552620 SH3BP2P78314 561 aa7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 PDE3AQ14432 1141 aa7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 LARGE2Q8N3Y3 721 aa7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 DNAAF2Q9NVR5 837 aaKnown RBP7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
CHMP4A-210ENST00000552620 NKTRP30414 1462 aaKnown RBP7.7□□□□□ -1.18
CHMP4A-210ENST00000552620 ERVK-7P63135 1459 aa7.7□□□□□ -1.18
CHMP4A-210ENST00000552620 NPM2Q86SE8 214 aaKnown RBP7.7□□□□□ -1.18
CHMP4A-210ENST00000552620 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
CHMP4A-210ENST00000552620 C14orf93Q9H972 538 aaKnown RBP7.7□□□□□ -1.18
CHMP4A-210ENST00000552620 ADGRF5Q8IZF2 1346 aa7.7□□□□□ -1.18
CHMP4A-210ENST00000552620 ADGRL1O94910 1474 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 KIF1BO60333 1816 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 SETBP1Q9Y6X0 1596 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 APAF1O14727 1248 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 TRIM32Q13049 653 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 USP4Q13107 963 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 SWI5Q1ZZU3 235 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 C20orf194Q5TEA3 1177 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 ANKLE1Q8NAG6 615 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 ZNF594Q96JF6 807 aaPredicted RBP7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 CGNL1Q0VF96 1302 aa7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 CENPJQ9HC77 1338 aaPredicted RBP7.69□□□□□ -1.18
CHMP4A-210ENST00000552620 ESPNB1AK53 854 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 RNF223E7ERA6 249 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 PPEF1O14829 653 aaPredicted RBP7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 VARSP26640 1264 aaKnown RBP7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 WNT7BP56706 349 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 GTF2IP78347 998 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 CLDN10P78369 228 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 PSME1Q06323 249 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 DPYDQ12882 1025 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 WDR63Q8IWG1 891 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 GNEQ9Y223 722 aaKnown RBP7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 PCDHB11Q9Y5F2 797 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
CHMP4A-210ENST00000552620 MROH1Q8NDA8 1641 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 MYO3AQ8NEV4 1616 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 MYOM1P52179 1685 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 MORC1Q86VD1 984 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 SIX5Q8N196 739 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 RUNDC1Q96C34 613 aa7.67□□□□□ -1.18
CHMP4A-210ENST00000552620 MYCP01106 439 aaPredicted RBP7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 NEFMP07197 916 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms