RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 MCTP1Q6DN14 999 aa4.92□□□□□ -1.62
PABPC1-211ENST00000519596 TRIM50Q86XT4 487 aa4.92□□□□□ -1.62
PABPC1-211ENST00000519596 NFATC2IPQ8NCF5 419 aa4.92□□□□□ -1.62
PABPC1-211ENST00000519596 CHMP3Q9Y3E7 222 aa4.92□□□□□ -1.62
PABPC1-211ENST00000519596 TMEM229AB2RXF0 380 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 H2AFB1P0C5Y9 115 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 H2AFB2P0C5Z0 115 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 GTF2IP78347 998 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 MTFR1Q15390 333 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 MDFIQ99750 246 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 ZNF232Q9UNY5 417 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 COG6Q9Y2V7 657 aa4.91□□□□□ -1.62
PABPC1-211ENST00000519596 RBM19Q9Y4C8 960 aaKnown RBP4.91□□□□□ -1.62
PABPC1-211ENST00000519596 ELOA3CA0A087WX78 387 aaPredicted RBP4.9□□□□□ -1.63
PABPC1-211ENST00000519596 ELOA3DA6NLF2 546 aaPredicted RBP4.9□□□□□ -1.63
PABPC1-211ENST00000519596 PIK3CDO00329 1044 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 COBLO75128 1261 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 FAM157BP0CG42 384 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 ALAS2P22557 587 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 ATP1A2P50993 1020 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 FLIIQ13045 1269 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 ELOA3BQ3SY89 546 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 ELOA3Q8NG57 546 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 ZIC5Q96T25 663 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 STRN4Q9NRL3 753 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 MARK1Q9P0L2 795 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 PCDHGA11Q9Y5H2 935 aa4.9□□□□□ -1.63
PABPC1-211ENST00000519596 UBTFP17480 764 aaKnown RBP4.89□□□□□ -1.63
PABPC1-211ENST00000519596 NEUROD1Q13562 356 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 LAMC2Q13753 1193 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 NCOA4Q13772 614 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 TMEM132AQ24JP5 1023 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 SAMD5Q5TGI4 173 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 C8orf86Q6ZUL3 223 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
PABPC1-211ENST00000519596 NACC1Q96RE7 527 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 ALG2Q9H553 416 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 SCHIP1Q9P0W5 487 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-211ENST00000519596 IQSEC3Q9UPP2 1182 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-211ENST00000519596 PARP3Q9Y6F1 533 aa4.89□□□□□ -1.63
PABPC1-211ENST00000519596 USP17L5A8MUK1 530 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 M0R082 166 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 NOS2P35228 1153 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 TRIM28Q13263 835 aaKnown RBP4.88□□□□□ -1.63
PABPC1-211ENST00000519596 TEAD4Q15561 434 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 ZNF417Q8TAU3 575 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 L3MBTL2Q969R5 705 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 ZNF587Q96SQ5 575 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-211ENST00000519596 ZNF358Q9NW07 568 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 STARD13Q9Y3M8 1113 aa4.88□□□□□ -1.63
PABPC1-211ENST00000519596 GPC6Q9Y625 555 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-211ENST00000519596 SERTM1A2A2V5 107 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 ADGRE1Q14246 886 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 MBTPS1Q14703 1052 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 LRRC69Q6ZNQ3 347 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 SYT9Q86SS6 491 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 SLC9A9Q8IVB4 645 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 DEPDC4Q8N2C3 294 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 ANKIB1Q9P2G1 1089 aa4.87□□□□□ -1.63
PABPC1-211ENST00000519596 ALBP02768 609 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 NID1P14543 1247 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 SELPP16109 830 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 TXLNAP40222 546 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 TNS4Q8IZW8 715 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 MICALL1Q8N3F8 863 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 TPCN2Q8NHX9 752 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 RHPN1Q8TCX5 695 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 PRDM6Q9NQX0 595 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 USP3Q9Y6I4 520 aa4.86□□□□□ -1.63
PABPC1-211ENST00000519596 COL17A1Q9UMD9 1497 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-211ENST00000519596 C9orf172C9J069 976 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 EFSO43281 561 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 PAX4O43316 350 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 YBX3P16989 372 aaKnown RBP eCLIP4.85□□□□□ -1.633e-49■□□□□ 9.2
PABPC1-211ENST00000519596 PSMA6P60900 246 aaKnown RBP4.85□□□□□ -1.63
PABPC1-211ENST00000519596 TBCELQ5QJ74 424 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 CCDC102BQ68D86 513 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 TXNRD3Q86VQ6 643 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 ZNF295-AS1Q8N0V1 137 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 TP53INP1Q96A56 240 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 POM121Q96HA1 1249 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 FMNL2Q96PY5 1086 aa4.85□□□□□ -1.63
PABPC1-211ENST00000519596 USP17L3A6NCW0 530 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 USP17L4A6NCW7 530 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 PALM3A6NDB9 673 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-211ENST00000519596 ADARB2-AS1A8MUL3 147 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 EML1O00423 815 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 SIN3BO75182 1162 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 ELNP15502 786 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 TXKP42681 527 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 HIF1AQ16665 826 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 HDGFL1Q5TGJ6 251 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 USP17L2Q6R6M4 530 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 USP17L1Q7RTZ2 530 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 PLEKHM2Q8IWE5 1019 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 LARGE2Q8N3Y3 721 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 ZDHHC1Q8WTX9 485 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
PABPC1-211ENST00000519596 ATP9BO43861 1147 aa4.83□□□□□ -1.64
PABPC1-211ENST00000519596 C1orf53Q5VUE5 145 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms